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All interfaces > All interologs > Interface groups > group87 > 7O7Y_At_A2

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Licorice
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Licorice
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Chain
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Hydrophobicity
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Conservation*

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Rim - Core

Contacts -

7O7Y_At
7O7Y_A2
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
At:19 [ARG] A2:1434 [C] 4.97 36.82
At:19 [ARG] A2:1435 [C] 3.37 36.82
At:21 [ARG] A2:1404 [C] 4.68 85.61
At:21 [ARG] A2:1405 [U] 2.6 85.61
At:23 [THR] A2:1405 [U] 4.74 73.2
At:29 [VAL] A2:1448 [OMG] 3.33 A2:1400 [C] 11.98
At:29 [VAL] A2:1449 [A] 4.58 A2:1399 [G] 11.98
At:30 [LYS] A2:1449 [A] 3.94 A2:1399 [G] 24.19
At:33 [GLU] A2:1448 [OMG] 3.3 A2:1400 [C] 72.32
At:49 [LYS] A2:1435 [C] 4.55 17.01
At:49 [LYS] A2:1436 [C] 4.19 17.01
At:50 [VAL] A2:1403 [A] 4.64 A2:1445 [U] 57.76
At:51 [LYS] A2:1402 [A] 4.34 A2:1446 [PSU] 17.09
At:51 [LYS] A2:1403 [A] 3.61 A2:1445 [U] 17.09
At:51 [LYS] A2:1434 [C] 4.02 17.09
At:51 [LYS] A2:1435 [C] 3.23 17.09
At:52 [GLY] A2:1402 [A] 3.12 A2:1446 [PSU] 94.93
At:52 [GLY] A2:1403 [A] 3.53 A2:1445 [U] 94.93
At:53 [PRO] A2:1402 [A] 2.91 A2:1446 [PSU] 84.07
At:54 [VAL] A2:1402 [A] 3.97 A2:1446 [PSU] 73.61
At:54 [VAL] A2:1403 [A] 3.47 A2:1445 [U] 73.61
At:55 [ARG] A2:1401 [U] 3.53 A2:1447 [A] base:SC 72.65
At:55 [ARG] A2:1446 [PSU] 2.61 A2:1402 [A] sugar:BB 72.65
At:55 [ARG] A2:1447 [A] 3.3 A2:1401 [U] base:SC 72.65
At:55 [ARG] A2:1448 [OMG] 3.49 A2:1400 [C] base/AA stacks 72.65
At:55 [ARG] A2:1581 [A] 4.86 72.65
At:56 [MET] A2:1405 [U] 3.4 72.77
At:56 [MET] A2:1446 [PSU] 3.57 A2:1402 [A] 72.77
At:56 [MET] A2:1447 [A] 3.77 A2:1401 [U] 72.77
At:56 [MET] A2:1581 [A] 3.37 72.77
At:57 [PRO] A2:1446 [PSU] 3.35 A2:1402 [A] 99.0
At:57 [PRO] A2:1447 [A] 3.74 A2:1401 [U] 99.0
At:57 [PRO] A2:1581 [A] 3.29 99.0
At:58 [THR] A2:1446 [PSU] 4.34 A2:1402 [A] 89.27
At:58 [THR] A2:1447 [A] 3.11 A2:1401 [U] 89.27
At:58 [THR] A2:1448 [OMG] 3.83 A2:1400 [C] 89.27
At:59 [LYS] A2:1581 [A] 4.06 77.03
At:60 [THR] A2:1549 [G] 3.77 A2:1585 [G] 33.28
At:60 [THR] A2:1550 [U] 3.47 33.28
At:61 [LEU] A2:1550 [U] 4.31 63.32
At:62 [ARG] A2:1550 [U] 4.98 11.79
At:63 [ILE] A2:1257 [G] 4.96 71.91
At:64 [THR] A2:1257 [G] 4.23 74.27
At:64 [THR] A2:1669 [U] 3.69 A2:1657 [G] 74.27
At:65 [THR] A2:1257 [G] 3.13 80.99
At:66 [ARG] A2:1255 [C] 3.57 A2:1246 [G] sugar:SC 83.68
At:66 [ARG] A2:1256 [G] 4.64 A2:1245 [PSU] 83.68
At:66 [ARG] A2:1257 [G] 3.74 base:BB 83.68
At:67 [LYS] A2:1337 [C] 3.72 A2:1492 [G] sugar:BB 72.11
At:67 [LYS] A2:1339 [G] 3.25 A2:1489 [C] 72.11
At:67 [LYS] A2:1483 [C] 3.18 72.11
At:68 [THR] A2:1337 [C] 4.96 A2:1492 [G] 80.98
At:68 [THR] A2:1492 [G] 4.22 A2:1337 [C] 80.98
At:69 [PRO] A2:1256 [G] 4.4 A2:1245 [PSU] 86.94
At:69 [PRO] A2:1336 [G] 3.76 A2:1493 [U] 86.94
At:69 [PRO] A2:1337 [C] 3.35 A2:1492 [G] 86.94
At:69 [PRO] A2:1492 [G] 3.95 A2:1337 [C] 86.94
At:69 [PRO] A2:1493 [U] 4.75 A2:1336 [G] 86.94
At:69 [PRO] A2:1496 [G] 3.55 86.94
At:70 [CYS] A2:1256 [G] 4.11 A2:1245 [PSU] 63.33
At:70 [CYS] A2:1492 [G] 3.51 A2:1337 [C] 63.33
At:70 [CYS] A2:1493 [U] 3.39 A2:1336 [G] 63.33
At:70 [CYS] A2:1496 [G] 4.69 63.33
At:71 [GLY] A2:1246 [G] 4.46 A2:1255 [C] 83.06
At:71 [GLY] A2:1255 [C] 2.76 A2:1246 [G] sugar:BB 83.06
At:71 [GLY] A2:1256 [G] 3.17 A2:1245 [PSU] 83.06
At:72 [GLU] A2:1247 [A] 4.8 51.29
At:72 [GLU] A2:1251 [A] 3.92 51.29
At:72 [GLU] A2:1252 [A] 2.89 51.29
At:72 [GLU] A2:1255 [C] 4.66 A2:1246 [G] 51.29
At:72 [GLU] A2:1339 [G] 4.07 A2:1489 [C] 51.29
At:72 [GLU] A2:1491 [OMG] 2.63 A2:1338 [4AC] base:SC 51.29
At:72 [GLU] A2:1492 [G] 3.21 A2:1337 [C] 51.29
At:73 [GLY] A2:1251 [A] 4.69 91.48
At:73 [GLY] A2:1252 [A] 3.42 91.48
At:73 [GLY] A2:1339 [G] 3.33 A2:1489 [C] 91.48
At:74 [SER] A2:1251 [A] 3.4 84.0
At:74 [SER] A2:1252 [A] 4.37 84.0
At:74 [SER] A2:1339 [G] 3.24 A2:1489 [C] sugar:BB 84.0
At:74 [SER] A2:1340 [U] 2.84 A2:1488 [A] 84.0
At:75 [LYS] A2:1252 [A] 4.29 43.53
At:75 [LYS] A2:1253 [C] 2.48 43.53
At:75 [LYS] A2:1255 [C] 3.72 A2:1246 [G] 43.53
At:76 [THR] A2:1339 [G] 2.77 A2:1489 [C] 92.71
At:77 [TRP] A2:1257 [G] 4.17 48.6
At:77 [TRP] A2:1668 [U] 3.44 A2:1658 [G] 48.6
At:77 [TRP] A2:1669 [U] 3.66 A2:1657 [G] 48.6
At:78 [ASP] A2:1483 [C] 4.31 81.03
At:79 [ARG] A2:1481 [A] 3.48 A2:1391 [U] 63.17
At:79 [ARG] A2:1482 [G] 3.84 A2:1390 [C] 63.17
At:79 [ARG] A2:1669 [U] 4.93 A2:1657 [G] 63.17
At:79 [ARG] A2:1670 [G] 2.93 A2:1656 [C] 63.17
At:81 [GLN] A2:1392 [OMC] 4.08 A2:1480 [G] 72.29
At:83 [ARG] A2:1392 [OMC] 2.53 A2:1480 [G] sugar:SC 84.28
At:83 [ARG] A2:1393 [U] 2.64 A2:1479 [U] 84.28
At:85 [HIS] A2:1447 [A] 4.88 A2:1401 [U] 84.8
At:85 [HIS] A2:1448 [OMG] 2.6 A2:1400 [C] 84.8
At:86 [LYS] A2:1405 [U] 3.18 base:SC 79.33
At:86 [LYS] A2:1580 [A] 4.48 79.33
At:86 [LYS] A2:1581 [A] 3.29 79.33
At:86 [LYS] A2:1582 [C] 4.85 79.33
At:87 [ARG] A2:1447 [A] 3.35 A2:1401 [U] 92.63
At:87 [ARG] A2:1448 [OMG] 2.62 A2:1400 [C] 92.63
At:88 [LEU] A2:1405 [U] 3.48 41.25
At:92 [HIS] A2:1435 [C] 3.33 0.0
At:92 [HIS] A2:1436 [C] 4.42 0.0

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group87 7O7Y_At_A2 At: 40s ribosomal protein us10, Oryctolagus cuniculus (natural) A2: 18s rRNA, Oryctolagus cuniculus (natural) G1SIZ2 Ribosomal protein S10 Eukaryotic small subunit ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 3

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1j_1a 7O7Y_At_A2 0.55 0.93 1.91 0.35 Ribosomal protein S10 compare
6S0X_j_a 7O7Y_At_A2 0.54 0.9 2.76 0.33 Ribosomal protein S10 compare
7K00_J_A 7O7Y_At_A2 0.60 0.92 1.86 0.38 Ribosomal protein S10 compare