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All interfaces > All interologs > Interface groups > group88 > 7O7Y_Ao_A2

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Licorice
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RNA

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Licorice
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Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

7O7Y_Ao
7O7Y_A2
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
Ao:18 [ARG] A2:1612 [G] 4.33 A2:1629 [C] 74.14
Ao:18 [ARG] A2:1613 [G] 2.66 A2:1628 [C] 74.14
Ao:35 [GLN] A2:1614 [G] 4.84 A2:1627 [C] 51.63
Ao:37 [TYR] A2:1614 [G] 3.6 A2:1627 [C] 38.39
Ao:38 [SER] A2:1613 [G] 3.84 A2:1628 [C] 59.95
Ao:38 [SER] A2:1614 [G] 3.22 A2:1627 [C] 59.95
Ao:39 [ALA] A2:1614 [G] 2.83 A2:1627 [C] 85.84
Ao:39 [ALA] A2:1615 [A] 3.41 A2:1626 [PSU] 85.84
Ao:40 [ARG] A2:1615 [A] 4.37 A2:1626 [PSU] 82.78
Ao:40 [ARG] A2:1616 [U] 2.9 A2:1625 [U] base:SC 82.78
Ao:40 [ARG] A2:1617 [U] 2.63 A2:1621 [A] base:SC 82.78
Ao:40 [ARG] A2:1618 [G] 2.77 base:SC 82.78
Ao:40 [ARG] A2:1621 [A] 2.9 A2:1617 [U] sugar:SC 82.78
Ao:40 [ARG] A2:1622 [U] 3.24 82.78
Ao:40 [ARG] A2:1625 [U] 3.49 A2:1616 [U] base:SC 82.78
Ao:40 [ARG] A2:1626 [PSU] 4.98 A2:1615 [A] 82.78
Ao:41 [GLN] A2:1622 [U] 4.69 11.12
Ao:42 [ARG] A2:1614 [G] 2.92 A2:1627 [C] 91.47
Ao:42 [ARG] A2:1615 [A] 3.08 A2:1626 [PSU] 91.47
Ao:43 [ARG] A2:1616 [U] 3.24 A2:1625 [U] base/AA stacks 97.28
Ao:43 [ARG] A2:1617 [U] 3.12 A2:1621 [A] base/AA stacks 97.28
Ao:43 [ARG] A2:1618 [G] 2.7 base:SC, base:SC 97.28
Ao:44 [ARG] A2:1620 [A] 3.07 68.8
Ao:44 [ARG] A2:1621 [A] 2.99 A2:1617 [U] 68.8
Ao:47 [ARG] A2:1618 [G] 3.31 base/AA stacks 93.72
Ao:47 [ARG] A2:1619 [C] 3.38 93.72
Ao:47 [ARG] A2:1620 [A] 2.7 93.72
Ao:50 [ARG] A2:1619 [C] 3.35 56.22
Ao:51 [ARG] A2:1301 [U] 3.16 sugar:SC base/AA stacks 7.63
Ao:52 [LYS] A2:1299 [G] 3.71 48.05
Ao:52 [LYS] A2:1300 [A] 4.37 48.05
Ao:52 [LYS] A2:1515 [G] 3.83 A2:1269 [C] 48.05
Ao:55 [SER] A2:1300 [A] 4.59 44.15
Ao:55 [SER] A2:1301 [U] 3.84 44.15
Ao:58 [LYS] A2:1301 [U] 4.9 51.43
Ao:59 [ARG] A2:1297 [U] 4.67 A2:1304 [C] 59.65
Ao:59 [ARG] A2:1298 [U] 3.72 A2:1302 [A] base:SC 59.65
Ao:59 [ARG] A2:1300 [A] 3.55 59.65
Ao:62 [LYS] A2:1296 [A] 3.19 A2:1305 [U] 37.68
Ao:77 [LYS] A2:1299 [G] 3.29 71.32
Ao:77 [LYS] A2:1300 [A] 4.84 71.32
Ao:78 [THR] A2:1299 [G] 3.56 86.9
Ao:79 [HIS] A2:1299 [G] 3.24 base/AA stacks 66.48
Ao:79 [HIS] A2:1515 [G] 3.05 A2:1269 [C] sugar:SC 66.48
Ao:79 [HIS] A2:1516 [G] 3.5 A2:1268 [C] 66.48
Ao:81 [ARG] A2:1516 [G] 3.29 A2:1268 [C] 96.42
Ao:81 [ARG] A2:1517 [G] 3.42 A2:1267 [C] 96.42
Ao:81 [ARG] A2:1622 [U] 3.37 96.42
Ao:81 [ARG] A2:1623 [U] 3.89 96.42
Ao:82 [ASP] A2:1620 [A] 2.8 sugar:SC 58.52
Ao:82 [ASP] A2:1621 [A] 4.97 A2:1617 [U] 58.52
Ao:82 [ASP] A2:1622 [U] 3.15 58.52
Ao:97 [TYR] A2:1269 [C] 2.57 A2:1515 [G] base:SC 77.44
Ao:97 [TYR] A2:1270 [G] 4.65 A2:1514 [C] 77.44
Ao:97 [TYR] A2:1515 [G] 3.62 A2:1269 [C] 77.44
Ao:97 [TYR] A2:1516 [G] 3.55 A2:1268 [C] 77.44
Ao:98 [ASN] A2:1241 [A] 3.5 base:BB 86.72
Ao:98 [ASN] A2:1516 [G] 3.96 A2:1268 [C] 86.72
Ao:98 [ASN] A2:1517 [G] 3.5 A2:1267 [C] 86.72
Ao:99 [GLY] A2:1241 [A] 3.27 99.0
Ao:99 [GLY] A2:1268 [C] 4.63 A2:1516 [G] 99.0
Ao:99 [GLY] A2:1269 [C] 3.32 A2:1515 [G] 99.0
Ao:99 [GLY] A2:1516 [G] 3.16 A2:1268 [C] base:BB 99.0
Ao:99 [GLY] A2:1517 [G] 3.5 A2:1267 [C] 99.0
Ao:100 [LYS] A2:1241 [A] 3.06 sugar:SC 67.14
Ao:100 [LYS] A2:1269 [C] 3.19 A2:1515 [G] sugar:BB 67.14
Ao:102 [PHE] A2:1299 [G] 3.64 76.87
Ao:115 [TYR] A2:1620 [A] 4.93 80.37
Ao:115 [TYR] A2:1621 [A] 2.88 A2:1617 [U] 80.37
Ao:115 [TYR] A2:1622 [U] 3.09 base/AA stacks 80.37
Ao:117 [GLY] A2:1622 [U] 3.36 92.41
Ao:117 [GLY] A2:1623 [U] 4.31 92.41
Ao:118 [GLU] A2:1622 [U] 3.15 93.37
Ao:120 [SER] A2:1623 [U] 3.74 75.04
Ao:121 [ILE] A2:1623 [U] 3.33 30.77
Ao:122 [THR] A2:1241 [A] 2.97 base:BB 94.63
Ao:122 [THR] A2:1242 [A] 3.04 A2:1240 [U] base:BB 94.63
Ao:122 [THR] A2:1517 [G] 3.14 A2:1267 [C] 94.63
Ao:122 [THR] A2:1518 [G] 2.82 A2:1266 [A] 94.63
Ao:122 [THR] A2:1623 [U] 3.0 base:SC, base:BB 94.63
Ao:123 [TYR] A2:1242 [A] 3.93 A2:1240 [U] 82.47
Ao:123 [TYR] A2:1243 [U] 4.38 A2:1239 [PSU] 82.47
Ao:123 [TYR] A2:1521 [G] 3.29 A2:1238 [C] 82.47
Ao:123 [TYR] A2:1623 [U] 3.4 82.47
Ao:124 [LYS] A2:1239 [PSU] 4.65 A2:1243 [U] 74.75
Ao:124 [LYS] A2:1240 [U] 3.65 A2:1242 [A] 74.75
Ao:124 [LYS] A2:1241 [A] 4.82 74.75
Ao:124 [LYS] A2:1243 [U] 4.43 A2:1239 [PSU] 74.75
Ao:124 [LYS] A2:1521 [G] 4.92 A2:1238 [C] 74.75
Ao:125 [PRO] A2:1239 [PSU] 4.49 A2:1243 [U] 0.91
Ao:126 [VAL] A2:1238 [C] 4.84 A2:1521 [G] 54.51
Ao:126 [VAL] A2:1239 [PSU] 3.83 A2:1243 [U] 54.51
Ao:126 [VAL] A2:1243 [U] 4.81 A2:1239 [PSU] 54.51
Ao:126 [VAL] A2:1521 [G] 3.5 A2:1238 [C] 54.51
Ao:126 [VAL] A2:1522 [C] 3.4 A2:1237 [G] 54.51
Ao:126 [VAL] A2:1523 [A] 4.87 54.51
Ao:127 [LYS] A2:1238 [C] 4.71 A2:1521 [G] 17.78
Ao:127 [LYS] A2:1239 [PSU] 3.37 A2:1243 [U] 17.78
Ao:128 [HIS] A2:1237 [G] 3.86 A2:1522 [C] 82.87
Ao:128 [HIS] A2:1238 [C] 2.99 A2:1521 [G] sugar:SC 82.87
Ao:128 [HIS] A2:1239 [PSU] 4.58 A2:1243 [U] 82.87
Ao:128 [HIS] A2:1521 [G] 4.23 A2:1238 [C] 82.87
Ao:128 [HIS] A2:1522 [C] 3.1 A2:1237 [G] 82.87
Ao:128 [HIS] A2:1523 [A] 3.32 base/AA stacks 82.87
Ao:129 [GLY] A2:1238 [C] 3.13 A2:1521 [G] sugar:BB 69.1
Ao:129 [GLY] A2:1239 [PSU] 4.11 A2:1243 [U] 69.1
Ao:129 [GLY] A2:1523 [A] 3.19 base:BB 69.1
Ao:130 [ARG] A2:1238 [C] 3.37 A2:1521 [G] 49.4
Ao:130 [ARG] A2:1523 [A] 4.6 49.4
Ao:131 [PRO] A2:1237 [G] 3.54 A2:1522 [C] 73.14
Ao:131 [PRO] A2:1238 [C] 3.96 A2:1521 [G] 73.14
Ao:131 [PRO] A2:1523 [A] 3.56 73.14
Ao:132 [GLY] A2:1237 [G] 3.2 A2:1522 [C] sugar:BB 96.25
Ao:132 [GLY] A2:1238 [C] 3.47 A2:1521 [G] 96.25
Ao:133 [ILE] A2:1236 [G] 4.71 A2:1524 [C] 73.02
Ao:133 [ILE] A2:1237 [G] 3.36 A2:1522 [C] 73.02
Ao:134 [GLY] A2:1236 [G] 2.49 A2:1524 [C] 89.5
Ao:134 [GLY] A2:1237 [G] 4.34 A2:1522 [C] 89.5
Ao:135 [ALA] A2:1236 [G] 3.05 A2:1524 [C] base:BB 95.69
Ao:135 [ALA] A2:1237 [G] 3.3 A2:1522 [C] 95.69
Ao:135 [ALA] A2:1524 [C] 4.26 A2:1236 [G] 95.69
Ao:135 [ALA] A2:1525 [G] 3.35 A2:1235 [C] 95.69
Ao:136 [THR] A2:1525 [G] 3.92 A2:1235 [C] 87.03
Ao:137 [HIS] A2:1525 [G] 3.29 A2:1235 [C] 79.86
Ao:137 [HIS] A2:1526 [C] 3.54 A2:1234 [G] 79.86
Ao:138 [SER] A2:1252 [A] 3.97 85.84
Ao:138 [SER] A2:1525 [G] 4.64 A2:1235 [C] 85.84
Ao:138 [SER] A2:1526 [C] 3.06 A2:1234 [G] sugar:SC 85.84
Ao:138 [SER] A2:1527 [G] 4.79 A2:1233 [PSU] 85.84

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group88 7O7Y_Ao_A2 Ao: 40s ribosomal protein us19, Oryctolagus cuniculus (natural) A2: 18s rRNA, Oryctolagus cuniculus (natural) G1U0Q2 Ribosomal protein S19 Eukaryotic small subunit ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 3

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1s_1a 7O7Y_Ao_A2 0.62 0.93 2.94 0.43 Ribosomal protein S19 compare
7K00_S_A 7O7Y_Ao_A2 0.55 0.92 2.87 0.27 Ribosomal protein S19 compare
6S0X_s_a 7O7Y_Ao_A2 0.21 0.89 4.66 0.06 Ribosomal protein S19 compare