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All interfaces > All interologs > Interface groups > group88 > 7RYG_s_a

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Licorice
Surface

RNA

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Licorice
Surface

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Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

7RYG_s
7RYG_a
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
s:2 [PRO] a:1309 [G] 3.75 a:1322 [C] 49.7
s:2 [PRO] a:1310 [U] 3.04 a:1321 [A] base:BB 49.7
s:2 [PRO] a:1311 [C] 2.61 a:1320 [G] base:BB 49.7
s:2 [PRO] a:1312 [U] 4.96 a:1316 [A] 49.7
s:2 [PRO] a:1320 [G] 4.02 a:1311 [C] 49.7
s:2 [PRO] a:1321 [A] 4.23 a:1310 [U] 49.7
s:3 [ARG] a:1310 [U] 4.42 a:1321 [A] 93.0
s:3 [ARG] a:1311 [C] 4.64 a:1320 [G] 93.0
s:3 [ARG] a:1313 [G] 3.44 a:975 [A] 93.0
s:3 [ARG] a:1314 [C] 4.98 a:976 [C] 93.0
s:3 [ARG] a:1315 [A] 2.81 93.0
s:3 [ARG] a:1316 [A] 3.06 a:1312 [U] 93.0
s:4 [SER] a:1310 [U] 3.64 a:1321 [A] 81.73
s:4 [SER] a:1311 [C] 2.75 a:1320 [G] 81.73
s:5 [LEU] a:1309 [G] 3.77 a:1322 [C] 13.56
s:5 [LEU] a:1310 [U] 3.2 a:1321 [A] 13.56
s:6 [LYS] a:1268 [G] 4.7 a:1261 [C] 21.07
s:6 [LYS] a:1310 [U] 4.99 a:1321 [A] 21.07
s:6 [LYS] a:1311 [C] 2.71 a:1320 [G] 21.07
s:7 [LYS] a:1313 [G] 3.22 a:975 [A] base:SC, base:SC 89.87
s:7 [LYS] a:1315 [A] 3.42 89.87
s:10 [PHE] a:1314 [C] 4.06 a:976 [C] 40.78
s:10 [PHE] a:1315 [A] 3.84 40.78
s:10 [PHE] a:1316 [A] 4.22 a:1312 [U] 40.78
s:14 [HIS] a:1011 [A] 3.79 36.27
s:14 [HIS] a:1012 [G] 4.5 36.27
s:18 [LYS] a:1010 [G] 4.69 a:1013 [A] 49.64
s:18 [LYS] a:1011 [A] 2.34 49.64
s:34 [TRP] a:1011 [A] 3.25 base/AA stacks 53.34
s:34 [TRP] a:1216 [A] 3.98 a:983 [U] 53.34
s:34 [TRP] a:1217 [G] 3.61 a:982 [C] 53.34
s:36 [ARG] a:1217 [G] 3.37 a:982 [C] 98.14
s:36 [ARG] a:1218 [G] 3.21 a:981 [C] 98.14
s:36 [ARG] a:1317 [C] 2.57 base:SC, base:SC 98.14
s:36 [ARG] a:1318 [U] 3.43 98.14
s:37 [ARG] a:1217 [G] 4.54 a:982 [C] 60.66
s:37 [ARG] a:1314 [C] 3.35 a:976 [C] base:SC 60.66
s:37 [ARG] a:1315 [A] 3.27 60.66
s:37 [ARG] a:1317 [C] 3.87 60.66
s:52 [HIS] a:983 [U] 4.94 a:1216 [A] 83.59
s:52 [HIS] a:1217 [G] 2.74 a:982 [C] sugar:SC 83.59
s:53 [ASN] a:955 [A] 3.57 base:BB 88.77
s:53 [ASN] a:1217 [G] 4.35 a:982 [C] 88.77
s:53 [ASN] a:1218 [G] 3.83 a:981 [C] 88.77
s:54 [GLY] a:955 [A] 3.21 99.0
s:54 [GLY] a:982 [C] 4.73 a:1217 [G] 99.0
s:54 [GLY] a:983 [U] 3.63 a:1216 [A] 99.0
s:54 [GLY] a:1217 [G] 3.05 a:982 [C] base:BB 99.0
s:54 [GLY] a:1218 [G] 3.6 a:981 [C] 99.0
s:55 [ARG] a:954 [U] 4.69 a:956 [A] 72.34
s:55 [ARG] a:955 [A] 2.66 base/AA stacks 72.34
s:55 [ARG] a:983 [U] 3.5 a:1216 [A] sugar:BB 72.34
s:70 [LYS] a:1315 [A] 4.49 88.36
s:70 [LYS] a:1316 [A] 3.27 a:1312 [U] 88.36
s:70 [LYS] a:1317 [C] 3.27 88.36
s:72 [GLY] a:1317 [C] 3.31 94.77
s:73 [GLU] a:1317 [C] 3.53 89.4
s:77 [THR] a:955 [A] 3.51 base:BB 96.37
s:77 [THR] a:956 [A] 3.21 a:954 [U] base:BB 96.37
s:77 [THR] a:1218 [G] 3.29 a:981 [C] 96.37
s:77 [THR] a:1219 [G] 2.85 96.37
s:77 [THR] a:1318 [U] 3.5 96.37
s:78 [ARG] a:956 [A] 4.42 a:954 [U] 89.28
s:78 [ARG] a:957 [U] 4.28 a:953 [U] 89.28
s:78 [ARG] a:1219 [G] 3.59 89.28
s:78 [ARG] a:1220 [C] 2.78 89.28
s:78 [ARG] a:1221 [U] 3.6 89.28
s:78 [ARG] a:1222 [A] 3.51 a:952 [U] 89.28
s:78 [ARG] a:1318 [U] 3.31 89.28
s:78 [ARG] a:1319 [C] 3.12 89.28
s:79 [THR] a:953 [U] 4.27 a:957 [U] 74.97
s:79 [THR] a:954 [U] 3.57 a:956 [A] 74.97
s:79 [THR] a:955 [A] 4.53 74.97
s:79 [THR] a:957 [U] 4.62 a:953 [U] 74.97
s:80 [TYR] a:953 [U] 4.06 a:957 [U] 40.61
s:80 [TYR] a:1222 [A] 4.97 a:952 [U] 40.61
s:80 [TYR] a:1223 [C] 3.66 a:951 [G] 40.61
s:80 [TYR] a:1224 [A] 2.96 40.61
s:81 [ARG] a:954 [U] 4.26 a:956 [A] 11.44
s:81 [ARG] a:955 [A] 4.62 11.44
s:82 [GLY] a:953 [U] 4.39 a:957 [U] 1.63
s:83 [HIS] a:951 [G] 3.86 a:1223 [C] 78.99
s:83 [HIS] a:952 [U] 2.76 a:1222 [A] sugar:SC 78.99
s:83 [HIS] a:953 [U] 4.33 a:957 [U] 78.99
s:83 [HIS] a:1223 [C] 3.08 a:951 [G] base:SC, sugar:SC 78.99
s:83 [HIS] a:1224 [A] 3.45 base/AA stacks 78.99

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group88 7RYG_s_a s: 30s ribosomal protein s19, Acinetobacter baumannii (strain ab0057) (natural) a: 16s ribosomal RNA, Acinetobacter baumannii ab0057 (natural) B7IA35 Ribosomal protein S19 Bacterial small subunit ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 1

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6S0X_s_a 7RYG_s_a 0.50 0.96 5.57 0.35 Ribosomal protein S19 Bacterial small subunit ribosomal RNA compare