RNAprotDB

All interfaces > All interologs > Interface groups > group90 > 2DR8_A_B vs 2ZH6_A_B

Interface analysis


mouse controls

Style

Protein

Cartoon
Licorice
Surface

RNA

Cartoon
Licorice
Surface

Color

Structure
Structure (with hetatm)
Chain
Chainbow

View

Focus on

Interface
RNA
Protein
All

Show chains

Interface

show interface as licorice

Common contacts -

2DR8_A
2DR8_B
2ZH6_A
2ZH6_B
Conserved?
A:296 [GLN] B:1 [G] A:296 [GLN] B:1 [G]
A:296 [GLN] B:2 [G] A:296 [GLN] B:2 [G]
A:302 [ARG] B:3 [C] A:302 [ARG] B:3 [C]
A:168 [ARG] B:2 [G] A:168 [ARG] B:2 [G]
A:292 [ASN] B:1 [G] A:292 [ASN] B:1 [G]
A:292 [ASN] B:32 [A] A:292 [ASN] B:32 [A]
A:164 [GLU] B:32 [A] A:164 [GLU] B:32 [A]
A:361 [ARG] B:13 [U] A:361 [ARG] B:13 [U]
A:361 [ARG] B:14 [U] A:361 [ARG] B:14 [U]
A:361 [ARG] B:15 [C] A:361 [ARG] B:15 [C]
A:63 [PHE] B:33 [C] A:63 [PHE] B:34 [U]
A:299 [ARG] B:2 [G] A:299 [ARG] B:2 [G]
A:299 [ARG] B:3 [C] A:299 [ARG] B:3 [C]
A:165 [TYR] B:1 [G] A:165 [TYR] B:1 [G]
A:165 [TYR] B:2 [G] A:165 [TYR] B:2 [G]
A:165 [TYR] B:31 [C] A:165 [TYR] B:31 [C]
A:165 [TYR] B:32 [A] A:165 [TYR] B:32 [A]
A:358 [PHE] B:15 [C] A:358 [PHE] B:15 [C]
A:226 [VAL] B:32 [A] A:226 [VAL] B:32 [A]
A:402 [LYS] B:1 [G] A:402 [LYS] B:1 [G]
A:402 [LYS] B:2 [G] A:402 [LYS] B:2 [G]
A:126 [ALA] B:33 [C] A:126 [ALA] B:34 [U]
A:225 [ASN] B:31 [C] A:225 [ASN] B:31 [C]
A:403 [ASN] B:1 [G] A:403 [ASN] B:1 [G]
A:373 [ARG] B:15 [C] A:373 [ARG] B:15 [C]
A:357 [LYS] B:15 [C] A:357 [LYS] B:15 [C]
A:357 [LYS] B:16 [G] A:357 [LYS] B:16 [G]
A:344 [ARG] B:13 [U] A:344 [ARG] B:13 [U]
A:344 [ARG] B:14 [U] A:344 [ARG] B:14 [U]
A:344 [ARG] B:15 [C] A:344 [ARG] B:15 [C]
A:229 [ASN] B:31 [C] A:229 [ASN] B:31 [C]
A:229 [ASN] B:32 [A] A:229 [ASN] B:32 [A]
A:112 [VAL] B:33 [C] A:112 [VAL] B:34 [U]
A:401 [GLY] B:2 [G] A:401 [GLY] B:2 [G]
A:354 [ASN] B:15 [C] A:354 [ASN] B:15 [C]
A:354 [ASN] B:16 [G] A:354 [ASN] B:16 [G]
A:303 [LYS] B:22 [G] A:303 [LYS] B:22 [G]
A:398 [HIS] B:23 [C] A:398 [HIS] B:23 [C]
A:398 [HIS] B:24 [C] A:398 [HIS] B:24 [C]
A:130 [THR] B:33 [C] A:130 [THR] B:34 [U]
A:224 [ARG] B:31 [C] A:224 [ARG] B:31 [C]
A:224 [ARG] B:32 [A] A:224 [ARG] B:32 [A]
A:345 [MET] B:15 [C] A:345 [MET] B:15 [C]
A:345 [MET] B:16 [G] A:345 [MET] B:16 [G]
A:228 [ALA] B:31 [C] A:228 [ALA] B:31 [C]
A:396 [HIS] B:21 [C] A:396 [HIS] B:21 [C]
A:396 [HIS] B:22 [G] A:396 [HIS] B:22 [G]
A:295 [PRO] B:1 [G] A:295 [PRO] B:1 [G]
A:295 [PRO] B:2 [G] A:295 [PRO] B:2 [G]
A:392 [TYR] B:21 [C] A:392 [TYR] B:21 [C]
A:392 [TYR] B:22 [G] A:392 [TYR] B:22 [G]
A:346 [GLY] B:15 [C] A:346 [GLY] B:15 [C]
A:310 [ARG] B:20 [C] A:310 [ARG] B:20 [C]
A:310 [ARG] B:21 [C] A:310 [ARG] B:21 [C]
A:310 [ARG] B:22 [G] A:310 [ARG] B:22 [G]
A:129 [ARG] B:31 [C] A:129 [ARG] B:31 [C]
A:95 [ALA] B:32 [A] A:95 [ALA] B:32 [A]
A:363 [ARG] B:15 [C] A:363 [ARG] B:15 [C]
A:163 [ALA] B:32 [A] A:163 [ALA] B:32 [A]
A:127 [VAL] B:33 [C] A:127 [VAL] B:34 [U]
A:347 [PRO] B:15 [C] A:347 [PRO] B:15 [C]
A:96 [GLU] B:32 [A] A:96 [GLU] B:32 [A]
A:291 [ASP] B:1 [G] A:291 [ASP] B:1 [G]
A:291 [ASP] B:32 [A] A:291 [ASP] B:32 [A]
A:399 [THR] B:22 [G] A:399 [THR] B:22 [G]
A:399 [THR] B:23 [C] A:399 [THR] B:23 [C]
A:164 [GLU] B:33 [C] A:164 [GLU] B:34 [U] ❌ 2ZH6_A_B
A:398 [HIS] B:22 [G] A:398 [HIS] B:22 [G] ❌ 2ZH6_A_B
A:224 [ARG] B:33 [C] A:224 [ARG] B:34 [U] ❌ 2ZH6_A_B
A:163 [ALA] B:33 [C] A:163 [ALA] B:34 [U] ❌ 2ZH6_A_B
A:291 [ASP] B:33 [C] A:291 [ASP] B:34 [U] ❌ 2ZH6_A_B
A:228 [ALA] B:30 [C] A:228 [ALA] B:30 [C] ❌ 2ZH6_B:30 no longer at interface
A:378 [GLU] B:15 [C] A:378 [GLU] B:15 [C] ❌ 2ZH6_A:378 no longer at interface
A:110 [ASP] B:33 [C] A:110 [ASP] B:34 [U] ❌ 2DR8_A:110 no longer at interface
A:59 [GLU] B:33 [C] A:59 [GLU] B:34 [U] ❌ 2DR8_A:59 no longer at interface
A:61 [ASP] B:33 [C] A:61 [ASP] B:34 [U] ❌ 2DR8_A:61 no longer at interface
A:99 [TYR] B:33 [C] A:99 [TYR] B:34 [U] ❌ 2DR8_A:99 no longer at interface

logo_download Export the table of contacts

Properties of this pair

Common ECOD label(s)
Common RFAM label(s)
Interface TM-score
Interface RMSD
Percentage identity
Protein TM-score
RNA TM-score
Protein coverage
RNA coverage
Percentage conservation
Apolar conservation
H-bond conservation
Percentage switching out
PAP/OAS1 substrate-binding domain & PAP/Archaeal CCA-adding enzyme, C-terminal domain & Nucleotidyltransferase 1.0 0.33 0.88 1.0 0.87 0.98 0.94 0.88 0.84 0.67 0.55


Other pairs involving 2DR8_A_B or 2ZH6_A_B

Total number of entries: 9

Interface 1 Interface 2 Percentage conservation
Interface TM-score
Interface RMSD
Percentage identity
Common ECOD label(s)
Common RFAM label(s)
Explore both interfaces
2ZH6_A_B 3OVB_A_C 0.97 0.99 0.89 0.62 PAP/OAS1 substrate-binding domain & PAP/Archaeal CCA-adding enzyme, C-terminal domain & Nucleotidyltransferase compare
2ZH6_A_B 4X4T_A_B,I 0.82 0.95 2.03 0.5 PAP/OAS1 substrate-binding domain & PAP/Archaeal CCA-adding enzyme, C-terminal domain & Nucleotidyltransferase compare
2DR8_A_B 2ZH3_A_B 0.87 0.98 1.12 0.93 PAP/OAS1 substrate-binding domain & PAP/Archaeal CCA-adding enzyme, C-terminal domain & Nucleotidyltransferase compare
2DR8_A_B 2ZH6_A_B 0.88 1.0 0.33 0.88 PAP/OAS1 substrate-binding domain & PAP/Archaeal CCA-adding enzyme, C-terminal domain & Nucleotidyltransferase compare
2DR8_A_B 4X4T_A_B,I 0.82 0.95 2.04 0.5 PAP/OAS1 substrate-binding domain & PAP/Archaeal CCA-adding enzyme, C-terminal domain & Nucleotidyltransferase compare
2DR8_A_B 3OVB_A_C 0.88 0.99 1.0 0.62 PAP/OAS1 substrate-binding domain & PAP/Archaeal CCA-adding enzyme, C-terminal domain & Nucleotidyltransferase compare
2ZH3_A_B 2ZH6_A_B 0.88 0.98 1.23 0.94 PAP/OAS1 substrate-binding domain & PAP/Archaeal CCA-adding enzyme, C-terminal domain & Nucleotidyltransferase compare
1TFW_A_G,J 2DR8_A_B 0.92 0.91 2.77 0.08 PAP/OAS1 substrate-binding domain & PAP/Archaeal CCA-adding enzyme, C-terminal domain & Nucleotidyltransferase compare
1TFW_A_G,J 2ZH6_A_B 0.76 0.91 3.01 0.15 PAP/OAS1 substrate-binding domain & PAP/Archaeal CCA-adding enzyme, C-terminal domain & Nucleotidyltransferase compare