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All interfaces > All interologs > Interface groups > group90 > 2ZH3_A_B

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Licorice
Surface

RNA

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Licorice
Surface

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Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

2ZH3_A
2ZH3_B
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
A:61 [ASP] B:34 [A] 4.08 99.0
A:63 [PHE] B:34 [A] 3.87 98.9
A:94 [TYR] B:33 [C] 3.41 sugar:BB 93.11
A:95 [ALA] B:33 [C] 3.0 95.79
A:95 [ALA] B:34 [A] 3.68 95.79
A:96 [GLU] B:33 [C] 3.49 87.55
A:96 [GLU] B:34 [A] 2.63 base:SC 87.55
A:97 [HIS] B:34 [A] 3.65 98.88
A:99 [TYR] B:33 [C] 4.3 97.34
A:99 [TYR] B:34 [A] 3.51 97.34
A:110 [ASP] B:34 [A] 4.25 92.99
A:112 [VAL] B:34 [A] 2.78 98.37
A:125 [SER] B:34 [A] 4.65 93.21
A:126 [ALA] B:34 [A] 2.86 92.18
A:127 [VAL] B:34 [A] 3.1 95.3
A:163 [ALA] B:32 [A] 3.33 95.59
A:163 [ALA] B:33 [C] 4.55 95.59
A:164 [GLU] B:32 [A] 3.39 91.67
A:164 [GLU] B:33 [C] 4.36 91.67
A:165 [TYR] B:1 [G] 3.56 B:31 [C] 75.93
A:165 [TYR] B:2 [G] 3.84 B:30 [C] 75.93
A:165 [TYR] B:31 [C] 2.69 B:1 [G] base:SC 75.93
A:165 [TYR] B:32 [A] 3.35 75.93
A:168 [ARG] B:2 [G] 4.9 B:30 [C] 59.95
A:224 [ARG] B:31 [C] 3.95 B:1 [G] 99.0
A:224 [ARG] B:32 [A] 3.55 99.0
A:226 [VAL] B:32 [A] 4.84 93.26
A:228 [ALA] B:31 [C] 3.75 B:1 [G] 91.16
A:229 [ASN] B:31 [C] 3.1 B:1 [G] 90.14
A:229 [ASN] B:32 [A] 3.64 90.14
A:291 [ASP] B:1 [G] 4.76 B:31 [C] 96.93
A:291 [ASP] B:32 [A] 2.65 sugar:SC 96.93
A:291 [ASP] B:33 [C] 2.99 sugar:SC 96.93
A:292 [ASN] B:1 [G] 3.07 B:31 [C] sugar:BB 78.55
A:292 [ASN] B:32 [A] 4.1 78.55
A:295 [PRO] B:1 [G] 4.89 B:31 [C] 89.85
A:295 [PRO] B:2 [G] 3.61 B:30 [C] 89.85
A:296 [GLN] B:1 [G] 3.34 B:31 [C] sugar:SC 91.67
A:296 [GLN] B:2 [G] 3.84 B:30 [C] 91.67
A:299 [ARG] B:2 [G] 3.91 B:30 [C] 84.89
A:299 [ARG] B:3 [C] 2.93 B:29 [G] 84.89
A:302 [ARG] B:3 [C] 3.54 B:29 [G] 61.17
A:303 [LYS] B:22 [G] 3.24 B:10 [C] 54.1
A:310 [ARG] B:20 [C] 4.82 B:12 [G] 43.73
A:310 [ARG] B:21 [C] 3.11 B:11 [G] 43.73
A:310 [ARG] B:22 [G] 3.58 B:10 [C] 43.73
A:344 [ARG] B:13 [U] 4.85 B:17 [A] 78.8
A:344 [ARG] B:14 [U] 3.66 78.8
A:344 [ARG] B:15 [C] 4.49 78.8
A:345 [MET] B:15 [C] 3.73 18.35
A:345 [MET] B:16 [G] 4.98 18.35
A:346 [GLY] B:15 [C] 3.35 98.9
A:347 [PRO] B:15 [C] 3.41 98.95
A:354 [ASN] B:15 [C] 2.6 sugar:SC 73.67
A:354 [ASN] B:16 [G] 3.9 73.67
A:357 [LYS] B:15 [C] 3.68 50.7
A:357 [LYS] B:16 [G] 3.39 50.7
A:358 [PHE] B:15 [C] 3.42 96.91
A:361 [ARG] B:13 [U] 4.95 B:17 [A] 79.53
A:361 [ARG] B:14 [U] 2.59 79.53
A:361 [ARG] B:15 [C] 3.05 79.53
A:363 [ARG] B:15 [C] 3.5 11.29
A:373 [ARG] B:15 [C] 4.27 89.87
A:378 [GLU] B:15 [C] 4.88 66.34
A:392 [TYR] B:21 [C] 4.49 B:11 [G] 1.07
A:392 [TYR] B:22 [G] 2.57 B:10 [C] 1.07
A:396 [HIS] B:21 [C] 2.82 B:11 [G] sugar:SC 32.16
A:396 [HIS] B:22 [G] 3.3 B:10 [C] 32.16
A:398 [HIS] B:22 [G] 4.94 B:10 [C] 20.54
A:398 [HIS] B:23 [C] 2.59 B:9 [G] 20.54
A:398 [HIS] B:24 [C] 2.81 B:8 [G] 20.54
A:399 [THR] B:22 [G] 3.91 B:10 [C] 68.1
A:399 [THR] B:23 [C] 3.62 B:9 [G] 68.1
A:401 [GLY] B:2 [G] 3.35 B:30 [C] 71.75
A:402 [LYS] B:1 [G] 3.61 B:31 [C] 57.74
A:402 [LYS] B:2 [G] 2.91 B:30 [C] 57.74
A:403 [ASN] B:1 [G] 4.07 B:31 [C] 58.02

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group90 2ZH3_A_B A: Cca-adding enzyme, Archaeoglobus fulgidus (genetically engineered) B: tRNA (34-mer) O28126 PAP/OAS1 substrate-binding domain & PAP/Archaeal CCA-adding enzyme, C-terminal domain & Nucleotidyltransferase ✘

Interologs

Total number of interologs for this interface: 5

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
2DR8_A_B 2ZH3_A_B 0.87 0.98 1.12 0.93 PAP/OAS1 substrate-binding domain & PAP/Archaeal CCA-adding enzyme, C-terminal domain & Nucleotidyltransferase compare
2ZH3_A_B 3OVB_A_C 0.87 0.97 1.41 0.62 PAP/OAS1 substrate-binding domain & PAP/Archaeal CCA-adding enzyme, C-terminal domain & Nucleotidyltransferase compare
2ZH3_A_B 2ZH6_A_B 0.88 0.98 1.23 0.94 PAP/OAS1 substrate-binding domain & PAP/Archaeal CCA-adding enzyme, C-terminal domain & Nucleotidyltransferase compare
2ZH3_A_B 4X4T_A_B,I 0.82 0.96 2.07 0.5 PAP/OAS1 substrate-binding domain & PAP/Archaeal CCA-adding enzyme, C-terminal domain & Nucleotidyltransferase compare
1TFW_A_G,J 2ZH3_A_B 0.85 0.94 2.1 0.15 PAP/OAS1 substrate-binding domain & PAP/Archaeal CCA-adding enzyme, C-terminal domain & Nucleotidyltransferase compare