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All interfaces > All interologs > Interface groups > group90 > 3OVB_A_C

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Licorice
Surface

RNA

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Licorice
Surface

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Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

3OVB_A
3OVB_C
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
A:46 [GLY] C:35 [A] 3.42 98.9
A:47 [SER] C:35 [A] 4.18 99.0
A:50 [ARG] C:35 [A] 3.06 89.29
A:59 [GLU] C:34 [C] 3.94 96.2
A:59 [GLU] C:35 [A] 2.92 96.2
A:61 [ASP] C:34 [C] 3.12 98.98
A:61 [ASP] C:35 [A] 3.02 98.98
A:63 [PHE] C:34 [C] 3.31 98.9
A:63 [PHE] C:35 [A] 4.99 98.9
A:93 [ARG] C:33 [C] 4.17 66.84
A:94 [TYR] C:33 [C] 3.8 92.21
A:95 [ALA] C:32 [A] 3.89 94.88
A:95 [ALA] C:33 [C] 2.83 base:BB 94.88
A:96 [GLU] C:32 [A] 3.31 88.19
A:96 [GLU] C:33 [C] 2.87 base:BB, base:SC 88.19
A:97 [HIS] C:33 [C] 2.99 base:BB 98.88
A:99 [TYR] C:33 [C] 2.54 sugar:SC 96.74
A:99 [TYR] C:34 [C] 3.53 96.74
A:110 [ASP] C:34 [C] 3.3 93.48
A:110 [ASP] C:35 [A] 4.35 93.48
A:112 [VAL] C:34 [C] 3.86 98.39
A:126 [ALA] C:33 [C] 3.3 91.89
A:126 [ALA] C:34 [C] 4.06 91.89
A:127 [VAL] C:34 [C] 3.37 95.08
A:129 [ARG] C:31 [C] 4.43 C:1 [G] 98.83
A:130 [THR] C:34 [C] 2.42 base:SC 96.11
A:130 [THR] C:35 [A] 3.24 96.11
A:133 [HIS] C:35 [A] 3.24 sugar:SC 99.0
A:163 [ALA] C:32 [A] 3.28 96.2
A:163 [ALA] C:33 [C] 4.15 96.2
A:163 [ALA] C:35 [A] 4.39 96.2
A:164 [GLU] C:32 [A] 3.28 93.04
A:164 [GLU] C:33 [C] 3.57 93.04
A:165 [TYR] C:1 [G] 3.4 C:31 [C] 75.03
A:165 [TYR] C:2 [G] 3.63 C:30 [C] 75.03
A:165 [TYR] C:31 [C] 2.65 C:1 [G] base:SC 75.03
A:165 [TYR] C:32 [A] 3.12 sugar:BB 75.03
A:168 [ARG] C:2 [G] 4.69 C:30 [C] 60.51
A:171 [SER] C:35 [A] 4.61 98.31
A:173 [TYR] C:35 [A] 4.09 96.23
A:176 [GLU] C:35 [A] 4.54 98.93
A:224 [ARG] C:31 [C] 2.84 C:1 [G] 99.0
A:224 [ARG] C:32 [A] 3.04 99.0
A:224 [ARG] C:35 [A] 3.33 base:SC 99.0
A:225 [ASN] C:31 [C] 4.91 C:1 [G] 98.98
A:226 [VAL] C:32 [A] 4.74 93.8
A:226 [VAL] C:35 [A] 4.96 93.8
A:228 [ALA] C:31 [C] 3.39 C:1 [G] 92.55
A:229 [ASN] C:31 [C] 3.05 C:1 [G] 90.29
A:229 [ASN] C:32 [A] 3.65 90.29
A:291 [ASP] C:1 [G] 4.54 C:31 [C] 96.6
A:291 [ASP] C:32 [A] 2.49 sugar:SC 96.6
A:291 [ASP] C:33 [C] 3.26 96.6
A:292 [ASN] C:1 [G] 3.09 C:31 [C] sugar:BB 76.71
A:292 [ASN] C:32 [A] 3.9 76.71
A:295 [PRO] C:2 [G] 3.51 C:30 [C] 85.59
A:296 [GLN] C:1 [G] 3.06 C:31 [C] sugar:SC 91.77
A:296 [GLN] C:2 [G] 3.76 C:30 [C] 91.77
A:299 [ARG] C:2 [G] 4.0 C:30 [C] 84.47
A:299 [ARG] C:3 [A] 2.87 C:29 [U] 84.47
A:302 [ARG] C:3 [A] 4.41 C:29 [U] 61.65
A:303 [LYS] C:21 [C] 4.91 C:11 [G] 51.27
A:303 [LYS] C:22 [A] 2.82 C:10 [U] 51.27
A:310 [ARG] C:20 [C] 4.6 C:12 [G] 46.48
A:310 [ARG] C:21 [C] 3.02 C:11 [G] 46.48
A:310 [ARG] C:22 [A] 3.57 C:10 [U] 46.48
A:344 [ARG] C:13 [U] 4.73 C:17 [A] 75.34
A:344 [ARG] C:14 [U] 3.74 C:851 [ATP] 75.34
A:344 [ARG] C:15 [C] 4.95 75.34
A:345 [MET] C:15 [C] 3.59 0.2
A:345 [MET] C:16 [A] 4.15 0.2
A:346 [GLY] C:15 [C] 3.7 98.9
A:347 [PRO] C:15 [C] 3.62 98.95
A:354 [ASN] C:15 [C] 2.87 sugar:SC 77.09
A:354 [ASN] C:16 [A] 4.91 77.09
A:357 [LYS] C:15 [C] 3.35 46.77
A:357 [LYS] C:16 [A] 4.48 46.77
A:358 [PHE] C:15 [C] 3.27 96.4
A:361 [ARG] C:14 [U] 4.07 C:851 [ATP] 78.77
A:361 [ARG] C:15 [C] 4.71 78.77
A:363 [ARG] C:15 [C] 4.32 13.44
A:373 [ARG] C:15 [C] 4.73 89.31
A:392 [TYR] C:21 [C] 4.6 C:11 [G] 0.49
A:392 [TYR] C:22 [A] 2.53 C:10 [U] 0.49
A:396 [HIS] C:21 [C] 3.04 C:11 [G] 22.98
A:396 [HIS] C:22 [A] 3.24 C:10 [U] 22.98
A:398 [HIS] C:22 [A] 3.24 C:10 [U] 7.68
A:398 [HIS] C:23 [U] 2.72 C:9 [A] 7.68
A:399 [THR] C:22 [A] 3.9 C:10 [U] 71.17
A:399 [THR] C:23 [U] 3.51 C:9 [A] 71.17
A:401 [GLY] C:2 [G] 3.42 C:30 [C] 72.9
A:402 [LYS] C:1 [G] 3.86 C:31 [C] 61.15
A:402 [LYS] C:2 [G] 2.77 C:30 [C] 61.15
A:403 [ASN] C:1 [G] 3.97 C:31 [C] 58.59

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group90 3OVB_A_C A: Cca-adding enzyme, Archaeoglobus fulgidus (natural) C: RNA (35-mer) O28126 PAP/OAS1 substrate-binding domain & PAP/Archaeal CCA-adding enzyme, C-terminal domain & Nucleotidyltransferase ✘

Interologs

Total number of interologs for this interface: 5

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
2ZH6_A_B 3OVB_A_C 0.97 0.99 0.89 0.62 PAP/OAS1 substrate-binding domain & PAP/Archaeal CCA-adding enzyme, C-terminal domain & Nucleotidyltransferase compare
2DR8_A_B 3OVB_A_C 0.88 0.99 1.0 0.62 PAP/OAS1 substrate-binding domain & PAP/Archaeal CCA-adding enzyme, C-terminal domain & Nucleotidyltransferase compare
2ZH3_A_B 3OVB_A_C 0.87 0.97 1.41 0.62 PAP/OAS1 substrate-binding domain & PAP/Archaeal CCA-adding enzyme, C-terminal domain & Nucleotidyltransferase compare
3OVB_A_C 4X4T_A_B,I 0.82 0.96 1.48 0.31 PAP/OAS1 substrate-binding domain & PAP/Archaeal CCA-adding enzyme, C-terminal domain & Nucleotidyltransferase compare
1TFW_A_G,J 3OVB_A_C 0.76 0.93 3.04 0.08 PAP/OAS1 substrate-binding domain & PAP/Archaeal CCA-adding enzyme, C-terminal domain & Nucleotidyltransferase compare