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All interfaces > All interologs > Interface groups > group91 > 6AZ3_W_1

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Licorice
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Licorice
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Chain
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Hydrophobicity
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Conservation*

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Rim - Core

Contacts -

6AZ3_W
6AZ3_1
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
W:2 [ALA] 1:263 [A] 3.36 64.1
W:2 [ALA] 1:264 [U] 3.03 1:188 [A] 64.1
W:3 [SER] 1:263 [A] 4.67 53.0
W:3 [SER] 1:264 [U] 3.78 1:188 [A] 53.0
W:3 [SER] 1:265 [U] 3.8 1:248 [A] 53.0
W:4 [ILE] 1:252 [G] 4.19 1:262 [C] 19.6
W:4 [ILE] 1:263 [A] 4.7 19.6
W:4 [ILE] 1:264 [U] 4.8 1:188 [A] 19.6
W:5 [LYS] 1:250 [A] 3.0 sugar:SC 39.0
W:5 [LYS] 1:251 [A] 3.21 39.0
W:5 [LYS] 1:252 [G] 3.47 1:262 [C] 39.0
W:5 [LYS] 1:263 [A] 3.2 base:SC 39.0
W:5 [LYS] 1:264 [U] 3.33 1:188 [A] sugar:BB 39.0
W:6 [CYS] 1:250 [A] 4.39 85.9
W:6 [CYS] 1:251 [A] 2.64 sugar:BB 85.9
W:6 [CYS] 1:375 [A] 4.12 7:27 [U] 85.9
W:6 [CYS] 1:376 [A] 4.8 7:26 [U] 85.9
W:6 [CYS] 1:725 [U] 4.66 85.9
W:7 [GLY] 1:251 [A] 3.81 54.9
W:7 [GLY] 1:376 [A] 3.35 7:26 [U] 54.9
W:7 [GLY] 1:725 [U] 4.17 54.9
W:8 [SER] 1:376 [A] 3.99 7:26 [U] 66.3
W:9 [ARG] 1:252 [G] 2.74 1:262 [C] 82.8
W:9 [ARG] 1:253 [G] 3.74 1:261 [C] 82.8
W:11 [LYS] 1:374 [G] 4.37 7:28 [C] 85.1
W:11 [LYS] 1:375 [A] 3.15 7:27 [U] 85.1
W:12 [ALA] 1:252 [G] 3.67 1:262 [C] 76.6
W:13 [ARG] 1:252 [G] 4.02 1:262 [C] 95.5
W:13 [ARG] 1:253 [G] 2.44 1:261 [C] 95.5
W:16 [HIS] 1:252 [G] 3.71 1:262 [C] 26.4
W:16 [HIS] 1:253 [G] 3.2 1:261 [C] sugar:SC 26.4
W:17 [PHE] 1:253 [G] 3.89 1:261 [C] 21.1
W:17 [PHE] 1:254 [U] 4.3 21.1
W:26 [VAL] 1:262 [C] 4.18 1:252 [G] 47.0
W:26 [VAL] 1:263 [A] 3.29 47.0
W:26 [VAL] 1:264 [U] 4.36 1:188 [A] 47.0
W:27 [LEU] 1:262 [C] 3.23 1:252 [G] 8.8
W:27 [LEU] 1:263 [A] 3.62 8.8
W:29 [SER] 1:262 [C] 3.29 1:252 [G] sugar:BB 64.5
W:29 [SER] 1:263 [A] 3.91 64.5
W:30 [ALA] 1:262 [C] 4.09 1:252 [G] 68.9
W:31 [PRO] 1:261 [C] 3.44 1:253 [G] 63.2
W:31 [PRO] 1:262 [C] 3.37 1:252 [G] 63.2
W:37 [ARG] 1:191 [U] 4.58 1:258 [A] 71.6
W:37 [ARG] 1:262 [C] 4.09 1:252 [G] 71.6
W:43 [ARG] 1:188 [A] 3.8 1:264 [U] 85.1
W:43 [ARG] 1:189 [A] 3.07 85.1
W:43 [ARG] 1:190 [U] 3.85 1:242 [A] 85.1
W:43 [ARG] 1:191 [U] 4.53 1:258 [A] 85.1
W:43 [ARG] 1:260 [C] 3.62 1:243 [G] 85.1
W:43 [ARG] 1:261 [C] 2.86 1:253 [G] 85.1
W:43 [ARG] 1:262 [C] 3.86 1:252 [G] 85.1
W:44 [ALA] 1:262 [C] 3.47 1:252 [G] 76.5
W:44 [ALA] 1:263 [A] 3.7 76.5
W:45 [MET] 1:263 [A] 4.89 52.0
W:56 [LYS] 1:191 [U] 3.46 1:258 [A] 56.6
W:56 [LYS] 1:236 [G] 4.71 1:195 [G] 56.6
W:57 [ARG] 1:191 [U] 3.27 1:258 [A] 77.6
W:57 [ARG] 1:235 [A2M] 3.3 77.6
W:57 [ARG] 1:236 [G] 4.19 1:195 [G] 77.6
W:57 [ARG] 1:237 [U] 2.66 77.6
W:57 [ARG] 1:254 [U] 3.67 sugar:SC 77.6
W:57 [ARG] 1:255 [G] 3.45 1:234 [G] 77.6
W:57 [ARG] 1:258 [A] 3.94 1:191 [U] 77.6
W:58 [GLY] 1:235 [A2M] 3.55 98.9
W:58 [GLY] 1:236 [G] 3.65 1:195 [G] 98.9
W:58 [GLY] 1:255 [G] 3.26 1:234 [G] 98.9
W:59 [THR] 1:234 [G] 3.95 1:255 [G] 25.2
W:59 [THR] 1:235 [A2M] 3.76 25.2
W:59 [THR] 1:255 [G] 3.0 1:234 [G] base:BB 25.2
W:60 [PHE] 1:255 [G] 4.96 1:234 [G] 35.5
W:61 [LYS] 1:195 [G] 4.46 1:236 [G] 64.9
W:61 [LYS] 1:236 [G] 2.91 1:195 [G] 64.9
W:74 [LYS] 1:415 [A] 3.77 1:411 [U] 30.3
W:84 [ARG] 1:414 [A] 3.68 1:437 [A2M] 10.8
W:84 [ARG] 1:416 [A] 3.56 1:412 [G] base/AA stacks 10.8
W:84 [ARG] 1:434 [U] 2.51 1:438 [A] 10.8
W:84 [ARG] 1:435 [G] 3.4 1:440 [A] 10.8
W:85 [GLU] 1:416 [A] 3.72 1:412 [G] sugar:BB 51.5
W:86 [LYS] 1:415 [A] 4.91 1:411 [U] 81.9
W:86 [LYS] 1:416 [A] 3.03 1:412 [G] 81.9
W:86 [LYS] 1:417 [G] 3.35 1:444 [C] 81.9
W:87 [ALA] 1:416 [A] 4.51 1:412 [G] 54.4
W:87 [ALA] 1:417 [G] 3.05 1:444 [C] 54.4
W:87 [ALA] 1:418 [C] 4.31 1:432 [A] 54.4
W:87 [ALA] 1:419 [A] 3.27 54.4
W:88 [ASN] 1:419 [A] 3.69 sugar:SC 65.5
W:92 [VAL] 1:416 [A] 3.67 1:412 [G] 37.2
W:94 [VAL] 1:414 [A] 4.1 1:437 [A2M] 48.3
W:95 [GLY] 1:414 [A] 4.42 1:437 [A2M] 51.2
W:97 [HIS] 1:253 [G] 4.15 1:261 [C] 50.7
W:97 [HIS] 1:254 [U] 3.41 50.7
W:97 [HIS] 1:255 [G] 4.33 1:234 [G] 50.7
W:98 [PRO] 1:261 [C] 4.79 1:253 [G] 70.6
W:99 [SER] 1:191 [U] 3.57 1:258 [A] base:SC 98.6
W:99 [SER] 1:253 [G] 3.43 1:261 [C] 98.6
W:99 [SER] 1:254 [U] 3.39 98.6
W:99 [SER] 1:258 [A] 4.99 1:191 [U] 98.6
W:99 [SER] 1:261 [C] 2.47 1:253 [G] base:SC, sugar:BB 98.6
W:99 [SER] 1:262 [C] 4.79 1:252 [G] 98.6
W:100 [ASN] 1:191 [U] 4.43 1:258 [A] 89.6
W:100 [ASN] 1:254 [U] 3.54 89.6
W:100 [ASN] 1:255 [G] 3.33 1:234 [G] 89.6
W:118 [ARG] 1:185 [C] 2.76 1:268 [G] 49.8
W:118 [ARG] 1:186 [G] 3.61 1:267 [A] 49.8
W:119 [LYS] 1:186 [G] 3.99 1:267 [A] 57.3
W:119 [LYS] 1:187 [A] 3.84 57.3
W:119 [LYS] 1:263 [A] 3.79 57.3
W:121 [ARG] 1:187 [A] 3.64 10.8
W:121 [ARG] 1:188 [A] 2.93 1:264 [U] 10.8
W:121 [ARG] 1:189 [A] 2.72 10.8

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group91 6AZ3_W_1 W: Ribosomal protein ul24, Leishmania donovani (natural) 1: rRNA alpha, Leishmania donovani (natural) SH3 Eukaryotic large subunit ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 3

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1YHQ_T_0 6AZ3_W_1 0.78 0.77 1.71 0.32 SH3 compare
1VQ8_T_0 6AZ3_W_1 0.77 0.77 1.62 0.32 SH3 compare
6AZ3_W_1 7O7Y_BY_B5 0.79 0.92 1.63 0.54 SH3 Eukaryotic large subunit ribosomal RNA compare