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All interfaces > All interologs > Interface groups > group91 > 6AZ3_W_7

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Licorice
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Licorice
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Chain
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Hydrophobicity
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Conservation*

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Rim - Core

Contacts -

6AZ3_W
6AZ3_7
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
W:9 [ARG] 7:21 [U] 2.94 1:382 [A] 82.84
W:10 [ARG] 7:22 [U] 3.76 79.1
W:10 [ARG] 7:23 [G] 3.01 1:380 [C] base/AA stacks 79.1
W:10 [ARG] 7:24 [G] 3.11 1:379 [C] base:SC, base:SC 79.1
W:10 [ARG] 7:25 [C] 4.47 1:377 [G] 79.1
W:13 [ARG] 7:21 [U] 3.92 1:382 [A] 95.53
W:13 [ARG] 7:22 [U] 2.94 95.53
W:14 [ARG] 7:22 [U] 3.46 70.06
W:14 [ARG] 7:23 [G] 3.13 1:380 [C] 70.06
W:17 [PHE] 7:22 [U] 3.49 base/AA stacks 21.18
W:18 [GLN] 7:22 [U] 2.9 base:SC 48.48
W:20 [PRO] 7:90 [U] 3.23 7:68 [A] 60.32
W:20 [PRO] 7:91 [A] 3.86 7:67 [U] 60.32
W:21 [SER] 7:72 [A] 4.61 16.87
W:21 [SER] 7:73 [U] 3.37 16.87
W:21 [SER] 7:89 [U] 3.24 7:69 [U] sugar:SC 16.87
W:21 [SER] 7:90 [U] 3.09 7:68 [A] sugar:SC 16.87
W:22 [HIS] 7:69 [U] 4.67 7:89 [U] 87.12
W:22 [HIS] 7:90 [U] 2.49 7:68 [A] sugar:SC 87.12
W:22 [HIS] 7:91 [A] 3.07 7:67 [U] 87.12
W:25 [ARG] 7:69 [U] 4.57 7:89 [U] 42.35
W:25 [ARG] 7:70 [C] 3.35 7:88 [A] 42.35
W:25 [ARG] 7:71 [A] 3.13 42.35
W:47 [VAL] 7:72 [A] 4.48 74.8
W:48 [ARG] 7:71 [A] 3.44 77.37
W:48 [ARG] 7:72 [A] 3.41 77.37
W:48 [ARG] 7:83 [A] 2.7 base:SC 77.37
W:49 [LYS] 7:71 [A] 4.6 63.78
W:49 [LYS] 7:72 [A] 2.83 63.78
W:69 [ALA] 7:74 [U] 4.36 37.73
W:70 [CYS] 7:72 [A] 3.77 91.91
W:70 [CYS] 7:73 [U] 3.73 91.91
W:70 [CYS] 7:74 [U] 3.83 91.91
W:71 [TYR] 7:73 [U] 4.73 68.23
W:71 [TYR] 7:74 [U] 3.47 base/AA stacks 68.23
W:71 [TYR] 7:75 [OMG] 3.06 7:50 [U] 68.23
W:71 [TYR] 7:76 [C] 4.67 7:49 [G] 68.23
W:72 [ARG] 7:71 [A] 3.98 7.8
W:72 [ARG] 7:72 [A] 3.72 7.8
W:72 [ARG] 7:73 [U] 3.59 7.8
W:72 [ARG] 7:74 [U] 4.97 7.8
W:73 [LEU] 7:73 [U] 4.78 56.87
W:73 [LEU] 7:74 [U] 3.65 56.87
W:73 [LEU] 7:75 [OMG] 3.34 7:50 [U] 56.87
W:107 [LYS] 7:82 [C] 4.85 49.63
W:107 [LYS] 7:83 [A] 3.68 49.63
W:109 [THR] 7:70 [C] 4.42 7:88 [A] 49.75
W:109 [THR] 7:71 [A] 4.43 49.75
W:109 [THR] 7:83 [A] 3.35 49.75
W:109 [THR] 7:84 [U] 3.33 49.75
W:110 [HIS] 7:84 [U] 3.29 57.31
W:111 [HIS] 7:70 [C] 3.28 7:88 [A] base/AA stacks 29.34
W:111 [HIS] 7:71 [A] 4.92 29.34
W:111 [HIS] 7:84 [U] 3.26 29.34
W:111 [HIS] 7:85 [U] 3.02 29.34
W:112 [ARG] 7:70 [C] 4.56 7:88 [A] 88.57
W:112 [ARG] 7:71 [A] 3.6 88.57
W:115 [ILE] 7:70 [C] 3.41 7:88 [A] 8.56
W:115 [ILE] 7:71 [A] 4.88 8.56
W:118 [ARG] 7:69 [U] 4.51 7:89 [U] 49.82
W:118 [ARG] 7:70 [C] 2.47 7:88 [A] 49.82

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group91 6AZ3_W_7 W: Ribosomal protein ul24, Leishmania donovani (natural) 7: rRNA 5.8s, Leishmania donovani (natural) SH3 5.8S ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 3

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1VQ8_T_0 6AZ3_W_7 0.61 0.79 1.61 0.2 SH3 compare
1YHQ_T_0 6AZ3_W_7 0.61 0.79 1.55 0.2 SH3 compare
6AZ3_W_7 7O7Y_BY_B8 0.88 0.91 0.76 0.54 SH3 5.8S ribosomal RNA compare