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All interfaces > All interologs > Interface groups > group93 > 4Y4O_1q_1a vs 7O7Y_Ak_A2

Interface analysis


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Common contacts -

4Y4O_1q
4Y4O_1a
7O7Y_Ak
7O7Y_A2
Conserved?
1q:20 [THR] 1a:276 [G] Ak:87 [VAL] A2:396 [G] ✔
1q:20 [THR] 1a:277 [C] Ak:87 [VAL] A2:397 [U] ✔
1q:31 [LEU] 1a:300 [A] Ak:98 [LYS] A2:421 [G] ✔
1q:31 [LEU] 1a:301 [G] Ak:98 [LYS] A2:422 [G] ✔
1q:31 [LEU] 1a:564 [C] Ak:98 [LYS] A2:661 [C] ✔
1q:64 [PRO] 1a:130 [A] Ak:133 [PRO] A2:114 [G] ✔
1q:64 [PRO] 1a:234 [C] Ak:133 [PRO] A2:352 [G] ✔
1q:64 [PRO] 1a:264 [U] Ak:133 [PRO] A2:384 [G] ✔
1q:64 [PRO] 1a:265 [G] Ak:133 [PRO] A2:385 [U] ✔
1q:42 [TYR] 1a:236 [G] Ak:109 [MET] A2:354 [C] ✔
1q:27 [PHE] 1a:238 [G] Ak:94 [HIS] A2:356 [G] ✔
1q:3 [LYS] 1a:127 [G] Ak:70 [GLY] A2:110 [U] ✔
1q:3 [LYS] 1a:128 [G] Ak:70 [GLY] A2:111 [A] ✔
1q:37 [LYS] 1a:280 [C] Ak:104 [LYS] A2:400 [C] ✔
1q:37 [LYS] 1a:585 [G] Ak:104 [LYS] A2:682 [PSU] ✔
1q:18 [THR] 1a:254 [G] Ak:85 [THR] A2:374 [G] ✔
1q:18 [THR] 1a:255 [G] Ak:85 [THR] A2:375 [G] ✔
1q:67 [LYS] 1a:253 [U] Ak:136 [LYS] A2:373 [U] ✔
1q:67 [LYS] 1a:254 [G] Ak:136 [LYS] A2:374 [G] ✔
1q:67 [LYS] 1a:265 [G] Ak:136 [LYS] A2:385 [U] ✔
1q:67 [LYS] 1a:266 [G] Ak:136 [LYS] A2:386 [G] ✔
1q:67 [LYS] 1a:267 [C] Ak:136 [LYS] A2:387 [C] ✔
1q:69 [LYS] 1a:254 [G] Ak:138 [VAL] A2:374 [G] ✔
1q:12 [SER] 1a:276 [G] Ak:79 [LYS] A2:396 [G] ✔
1q:32 [TYR] 1a:563 [A] Ak:99 [TYR] A2:660 [G] ✔
1q:32 [TYR] 1a:564 [C] Ak:99 [TYR] A2:661 [C] ✔
1q:39 [SER] 1a:280 [C] Ak:106 [HIS] A2:400 [C] ✔
1q:17 [LYS] 1a:255 [G] Ak:84 [ARG] A2:375 [G] ✔
1q:17 [LYS] 1a:256 [U] Ak:84 [ARG] A2:376 [U] ✔
1q:66 [SER] 1a:253 [U] Ak:135 [SER] A2:373 [U] ✔
1q:66 [SER] 1a:254 [G] Ak:135 [SER] A2:374 [G] ✔
1q:66 [SER] 1a:255 [G] Ak:135 [SER] A2:375 [G] ✔
1q:66 [SER] 1a:265 [G] Ak:135 [SER] A2:385 [U] ✔
1q:66 [SER] 1a:266 [G] Ak:135 [SER] A2:386 [G] ✔
1q:71 [PHE] 1a:235 [C] Ak:140 [PHE] A2:353 [U] ✔
1q:71 [PHE] 1a:236 [G] Ak:140 [PHE] A2:354 [C] ✔
1q:45 [HIS] 1a:255 [G] Ak:112 [HIS] A2:375 [G] ✔
1q:2 [PRO] 1a:128 [G] Ak:69 [ARG] A2:111 [A] ✔
1q:14 [LYS] 1a:275 [G] Ak:81 [LYS] A2:395 [G] ✔
1q:4 [LYS] 1a:235 [C] Ak:71 [ARG] A2:353 [U] ✔
1q:4 [LYS] 1a:236 [G] Ak:71 [ARG] A2:354 [C] ✔
1q:4 [LYS] 1a:635 [G] Ak:71 [ARG] A2:856 [G] ✔
1q:16 [GLN] 1a:254 [G] Ak:83 [GLN] A2:374 [G] ✔
1q:16 [GLN] 1a:255 [G] Ak:83 [GLN] A2:375 [G] ✔
1q:16 [GLN] 1a:272 [C] Ak:83 [GLN] A2:392 [C] ✔
1q:16 [GLN] 1a:273 [A] Ak:83 [GLN] A2:393 [A] ✔
1q:70 [ARG] 1a:234 [C] Ak:139 [ARG] A2:352 [G] ✔
1q:70 [ARG] 1a:235 [C] Ak:139 [ARG] A2:353 [U] ✔
1q:65 [ILE] 1a:255 [G] Ak:134 [LEU] A2:375 [G] ✔
1q:65 [ILE] 1a:264 [U] Ak:134 [LEU] A2:384 [G] ✔
1q:65 [ILE] 1a:265 [G] Ak:134 [LEU] A2:385 [U] ✔
1q:65 [ILE] 1a:266 [G] Ak:134 [LEU] A2:386 [G] ✔
1q:15 [MET] 1a:253 [U] Ak:82 [MET] A2:373 [U] ✔
1q:15 [MET] 1a:254 [G] Ak:82 [MET] A2:374 [G] ✔
1q:15 [MET] 1a:275 [G] Ak:82 [MET] A2:395 [G] ✔
1q:15 [MET] 1a:276 [G] Ak:82 [MET] A2:396 [G] ✔
1q:61 [GLU] 1a:127 [G] Ak:130 [GLU] A2:110 [U] ✔
1q:61 [GLU] 1a:128 [G] Ak:130 [GLU] A2:111 [A] ✔
1q:61 [GLU] 1a:234 [C] Ak:130 [GLU] A2:352 [G] ✔
1q:61 [GLU] 1a:235 [C] Ak:130 [GLU] A2:353 [U] ✔
1q:24 [GLU] 1a:280 [C] Ak:91 [ASP] A2:400 [C] ✔
1q:25 [ARG] 1a:237 [C] Ak:92 [TYR] A2:355 [OMU] ✔
1q:25 [ARG] 1a:238 [G] Ak:92 [TYR] A2:356 [G] ✔
1q:38 [ARG] 1a:280 [C] Ak:105 [ARG] A2:400 [C] ✔
1q:40 [LYS] 1a:237 [C] Ak:107 [LYS] A2:355 [OMU] ✔
1q:68 [ARG] 1a:253 [U] Ak:137 [THR] A2:373 [U] ✔
1q:68 [ARG] 1a:254 [G] Ak:137 [THR] A2:374 [G] ✔
1q:41 [LYS] 1a:277 [C] Ak:108 [ASN] A2:397 [U] ✔
1q:41 [LYS] 1a:278 [G] Ak:108 [ASN] A2:398 [G] ✔
1q:63 [ARG] 1a:130 [A] Ak:132 [ARG] A2:114 [G] ✔
1q:63 [ARG] 1a:264 [U] Ak:132 [ARG] A2:384 [G] ✔
1q:63 [ARG] 1a:265 [G] Ak:132 [ARG] A2:385 [U] ✔
1q:43 [LEU] 1a:253 [U] Ak:110 [SER] A2:373 [U] ✔
1q:43 [LEU] 1a:276 [G] Ak:110 [SER] A2:396 [G] ✔
1q:43 [LEU] 1a:277 [C] Ak:110 [SER] A2:397 [U] ✔
1q:42 [TYR] 1a:235 [C] Ak:109 [MET] A2:353 [U] ❌ 7O7Y_Ak_A2
1q:42 [TYR] 1a:237 [C] Ak:109 [MET] A2:355 [OMU] ❌ 7O7Y_Ak_A2
1q:3 [LYS] 1a:129 [U] Ak:70 [GLY] A2:112 [U] ❌ 7O7Y_Ak_A2
1q:3 [LYS] 1a:130 [A] Ak:70 [GLY] A2:114 [G] ❌ 7O7Y_Ak_A2
1q:3 [LYS] 1a:189F [U] Ak:70 [GLY] A2:294 [C] ❌ 7O7Y_Ak_A2
1q:69 [LYS] 1a:255 [G] Ak:138 [VAL] A2:375 [G] ❌ 7O7Y_Ak_A2
1q:12 [SER] 1a:275 [G] Ak:79 [LYS] A2:395 [G] ❌ 7O7Y_Ak_A2
1q:17 [LYS] 1a:254 [G] Ak:84 [ARG] A2:374 [G] ❌ 7O7Y_Ak_A2
1q:81 [ARG] 1a:647 [C] Ak:150 [GLY] A2:868 [OMG] ❌ 7O7Y_Ak_A2
1q:2 [PRO] 1a:127 [G] Ak:69 [ARG] A2:110 [U] ❌ 7O7Y_Ak_A2
1q:2 [PRO] 1a:635 [G] Ak:69 [ARG] A2:856 [G] ❌ 7O7Y_Ak_A2
1q:70 [ARG] 1a:265 [G] Ak:139 [ARG] A2:385 [U] ❌ 7O7Y_Ak_A2
1q:61 [GLU] 1a:189F [U] Ak:130 [GLU] A2:294 [C] ❌ 7O7Y_Ak_A2
1q:40 [LYS] 1a:236 [G] Ak:107 [LYS] A2:354 [C] ❌ 7O7Y_Ak_A2
1q:68 [ARG] 1a:276 [G] Ak:137 [THR] A2:396 [G] ❌ 7O7Y_Ak_A2
1q:68 [ARG] 1a:277 [C] Ak:137 [THR] A2:397 [U] ❌ 7O7Y_Ak_A2
1q:34 [LYS] 1a:585 [G] Ak:101 [ARG] A2:682 [PSU] ❌ 7O7Y_Ak_A2
1q:63 [ARG] 1a:189F [U] Ak:132 [ARG] A2:294 [C] ❌ 7O7Y_Ak_A2
1q:63 [ARG] 1a:189G [G] Ak:132 [ARG] A2:295 [U] ❌ 7O7Y_Ak_A2
1q:43 [LEU] 1a:254 [G] Ak:110 [SER] A2:374 [G] ❌ 7O7Y_Ak_A2
1q:34 [LYS] 1a:564 [C] Ak:101 [ARG] A2:661 [C] ❌ 4Y4O_1q_1a
1q:37 [LYS] 1a:584 [G] Ak:104 [LYS] A2:681 [G] ❌ 4Y4O_1q_1a
1q:38 [ARG] 1a:238 [G] Ak:105 [ARG] A2:356 [G] ❌ 4Y4O_1q_1a
1q:39 [SER] 1a:279 [A] Ak:106 [HIS] A2:399 [A] ❌ 4Y4O_1q_1a
1q:39 [SER] 1a:278 [G] Ak:106 [HIS] A2:398 [G] ❌ 4Y4O_1q_1a
1q:40 [LYS] 1a:238 [G] Ak:107 [LYS] A2:356 [G] ❌ 4Y4O_1q_1a
1q:42 [TYR] 1a:277 [C] Ak:109 [MET] A2:397 [U] ❌ 4Y4O_1q_1a
1q:66 [SER] 1a:267 [C] Ak:135 [SER] A2:387 [C] ❌ 4Y4O_1q_1a
1q:2 [PRO] 1a:129 [U] Ak:69 [ARG] A2:112 [U] ❌ 4Y4O_1q_1a
1q:2 [PRO] 1a:130 [A] Ak:69 [ARG] A2:114 [G] ❌ 4Y4O_1q_1a
1q:4 [LYS] 1a:127 [G] Ak:71 [ARG] A2:110 [U] ❌ 4Y4O_1q_1a
1q:12 [SER] 1a:277 [C] Ak:79 [LYS] A2:397 [U] ❌ 4Y4O_1q_1a
1q:14 [LYS] 1a:276 [G] Ak:81 [LYS] A2:396 [G] ❌ 4Y4O_1q_1a
1q:31 [LEU] 1a:563 [A] Ak:98 [LYS] A2:660 [G] ❌ 4Y4O_1q_1a
1q:37 [LYS] 1a:586 [C] Ak:104 [LYS] A2:683 [U] ❌ 7O7Y_A2:683 no longer at interface
1q:67 [LYS] 1a:252 [U] Ak:136 [LYS] A2:372 [A] ❌ 7O7Y_A2:372 no longer at interface
1q:2 [PRO] 1a:636 [U] Ak:69 [ARG] A2:857 [C] ❌ 7O7Y_A2:857 no longer at interface
1q:28 [PRO] 1a:598 [U] Ak:95 [TYR] A2:804 [C] ❌ 7O7Y_A2:804 no longer at interface
1q:35 [VAL] 1a:586 [C] Ak:102 [PHE] A2:683 [U] ❌ 7O7Y_Ak:102, 7O7Y_A2:683 no longer at interface
1q:35 [VAL] 1a:597 [G] Ak:102 [PHE] A2:803 [A] ❌ 7O7Y_Ak:102, 7O7Y_A2:803 no longer at interface
1q:26 [GLN] 1a:596 [C] Ak:93 [LEU] A2:802 [PSU] ❌ 7O7Y_Ak:93, 7O7Y_A2:802 no longer at interface
1q:26 [GLN] 1a:597 [G] Ak:93 [LEU] A2:803 [A] ❌ 7O7Y_Ak:93, 7O7Y_A2:803 no longer at interface
1q:26 [GLN] 1a:644 [G] Ak:93 [LEU] A2:865 [A] ❌ 7O7Y_Ak:93, 7O7Y_A2:865 no longer at interface
1q:26 [GLN] 1a:645 [C] Ak:93 [LEU] A2:866 [A] ❌ 7O7Y_Ak:93, 7O7Y_A2:866 no longer at interface
1q:34 [LYS] 1a:586 [C] Ak:101 [ARG] A2:683 [U] ❌ 7O7Y_A2:683 no longer at interface
1q:34 [LYS] 1a:879 [C] Ak:101 [ARG] A2:1161 [U] ❌ 7O7Y_A2:1161 no longer at interface
1q:34 [LYS] 1a:876 [G] Ak:101 [ARG] A2:1158 [G] ❌ 4Y4O_1a:876 no longer at interface
1q:38 [ARG] 1a:239 [U] Ak:105 [ARG] A2:357 [C] ❌ 4Y4O_1a:239 no longer at interface
1q:80 [GLY] 1a:648 [A] Ak:149 [ALA] A2:869 [G] ❌ 4Y4O_1q:80, 4Y4O_1a:648 no longer at interface
1q:81 [ARG] 1a:648 [A] Ak:150 [GLY] A2:869 [G] ❌ 4Y4O_1a:648 no longer at interface
1q:2 [PRO] 1a:189E [U] Ak:69 [ARG] A2:293 [A] ❌ 4Y4O_1a:189E no longer at interface
1q:2 [PRO] 1a:189D [C] Ak:69 [ARG] A2:292 [G] ❌ 4Y4O_1a:189D no longer at interface
1q:2 [PRO] 1a:129A [G] Ak:69 [ARG] A2:113 [G] ❌ 4Y4O_1a:129A no longer at interface
1q:4 [LYS] 1a:125 [U] Ak:71 [ARG] A2:108 [G] ❌ 4Y4O_1a:125 no longer at interface
1q:4 [LYS] 1a:126 [G] Ak:71 [ARG] A2:109 [PSU] ❌ 4Y4O_1a:126 no longer at interface
1q:14 [LYS] 1a:274 [A] Ak:81 [LYS] A2:394 [U] ❌ 4Y4O_1a:274 no longer at interface
1q:27 [PHE] 1a:633 [G] Ak:94 [HIS] A2:854 [C] ❌ 4Y4O_1a:633 no longer at interface
1q:27 [PHE] 1a:239 [U] Ak:94 [HIS] A2:357 [C] ❌ 4Y4O_1a:239 no longer at interface
1q:28 [PRO] 1a:633 [G] Ak:95 [TYR] A2:854 [C] ❌ 4Y4O_1a:633 no longer at interface
1q:30 [PRO] 1a:632 [A] Ak:97 [ARG] A2:853 [G] ❌ 4Y4O_1q:30, 4Y4O_1a:632 no longer at interface
1q:31 [LEU] 1a:302 [G] Ak:98 [LYS] A2:423 [U] ❌ 4Y4O_1a:302 no longer at interface
1q:62 [SER] 1a:189F [U] Ak:131 [CYS] A2:294 [C] ❌ 7O7Y_Ak:131 no longer at interface
1q:62 [SER] 1a:234 [C] Ak:131 [CYS] A2:352 [G] ❌ 7O7Y_Ak:131 no longer at interface
1q:72 [ARG] 1a:189F [U] Ak:141 [ASN] A2:294 [C] ❌ 7O7Y_Ak:141 no longer at interface
1q:33 [GLY] 1a:564 [C] Ak:100 [ASN] A2:661 [C] ❌ 4Y4O_1q:33 no longer at interface
1q:80 [GLY] 1a:647 [C] Ak:149 [ALA] A2:868 [OMG] ❌ 4Y4O_1q:80 no longer at interface
1q:6 [LEU] 1a:236 [G] Ak:73 [LEU] A2:354 [C] ❌ 4Y4O_1q:6 no longer at interface
1q:22 [LEU] 1a:280 [C] Ak:89 [ARG] A2:400 [C] ❌ 4Y4O_1q:22 no longer at interface
1q:23 [VAL] 1a:236 [G] Ak:90 [ARG] A2:354 [C] ❌ 4Y4O_1q:23 no longer at interface
1q:23 [VAL] 1a:237 [C] Ak:90 [ARG] A2:355 [OMU] ❌ 4Y4O_1q:23 no longer at interface
1q:30 [PRO] 1a:300 [A] Ak:97 [ARG] A2:421 [G] ❌ 4Y4O_1q:30 no longer at interface
1q:30 [PRO] 1a:301 [G] Ak:97 [ARG] A2:422 [G] ❌ 4Y4O_1q:30 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Nucleic acid-binding proteins 0.92 2.68 0.31 0.69 0.93 0.71 0.62 0.65 0.66 0.27 0.53


Other pairs involving 4Y4O_1q_1a or 7O7Y_Ak_A2

Total number of entries: 8

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
2VQE_Q_A 4Y4O_1q_1a 0.96 0.99 0.53 0.91 Nucleic acid-binding proteins Bacterial small subunit ribosomal RNA compare
4Y4O_1q_1a 6S0X_q_a 0.46 0.94 3.18 0.42 Nucleic acid-binding proteins Bacterial small subunit ribosomal RNA compare
4Y4O_1q_1a 7K00_Q_A 0.77 0.97 2.06 0.5 Nucleic acid-binding proteins Bacterial small subunit ribosomal RNA compare
4Y4O_1q_1a 7O7Y_Ak_A2 0.65 0.92 2.68 0.31 Nucleic acid-binding proteins compare
7K00_Q_A 7O7Y_Ak_A2 0.67 0.92 2.17 0.29 Nucleic acid-binding proteins compare
2VQE_Q_A 7O7Y_Ak_A2 0.67 0.91 2.56 0.3 Nucleic acid-binding proteins compare
6S0X_q_a 7O7Y_Ak_A2 0.48 0.9 3.09 0.32 Nucleic acid-binding proteins compare
4Y4O_1q_1a 7RYG_q_a 0.77 0.91 2.82 0.57 Nucleic acid-binding proteins Bacterial small subunit ribosomal RNA compare