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All interfaces > All interologs > Interface groups > group93 > 7RYG_q_a

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Licorice
Surface

RNA

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Licorice
Surface

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Chain
Chain (with hetatm)
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Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

7RYG_q
7RYG_a
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
q:7 [ARG] a:122 [A] 3.44 a:231 [U] sugar:SC 72.94
q:7 [ARG] a:123 [G] 3.26 a:230 [C] 72.94
q:7 [ARG] a:632 [A] 3.02 a:600 [U] sugar:SC 72.94
q:7 [ARG] a:633 [U] 3.97 a:599 [A] 72.94
q:15 [SER] a:271 [G] 4.98 a:245 [U] 80.67
q:15 [SER] a:272 [G] 2.93 a:244 [C] 80.67
q:17 [LYS] a:271 [G] 3.65 a:245 [U] 62.08
q:17 [LYS] a:272 [G] 4.65 a:244 [C] 62.08
q:18 [MET] a:249 [U] 3.05 a:269 [A] 69.33
q:18 [MET] a:250 [G] 3.45 a:268 [C] 69.33
q:18 [MET] a:271 [G] 3.76 a:245 [U] 69.33
q:18 [MET] a:272 [G] 4.05 a:244 [C] 69.33
q:19 [ASP] a:250 [G] 2.71 a:268 [C] sugar:BB 42.27
q:19 [ASP] a:251 [G] 3.8 a:267 [C] 42.27
q:20 [LYS] a:250 [G] 4.94 a:268 [C] 71.22
q:20 [LYS] a:251 [G] 3.14 a:267 [C] 71.22
q:20 [LYS] a:252 [U] 3.15 a:266 [A] 71.22
q:21 [SER] a:250 [G] 3.65 a:268 [C] 92.63
q:23 [VAL] a:272 [G] 4.68 a:244 [C] 73.45
q:23 [VAL] a:273 [C] 4.3 a:243 [G] 73.45
q:28 [ARG] a:233 [A] 3.63 a:120 [U] 67.36
q:28 [ARG] a:234 [G] 3.93 a:119 [C] 67.36
q:29 [ARG] a:593 [A] 4.93 a:641 [U] 3.54
q:29 [ARG] a:594 [G] 3.69 a:640 [C] 3.54
q:29 [ARG] a:642 [G] 4.67 a:591 [U] 3.54
q:31 [GLN] a:595 [U] 3.97 a:637 [A] 14.03
q:34 [LEU] a:297 [G] 4.97 a:292 [U] 53.82
q:34 [LEU] a:561 [C] 3.78 53.82
q:35 [TYR] a:561 [C] 3.31 80.6
q:37 [LYS] a:582 [G] 3.2 a:753 [C] 87.57
q:37 [LYS] a:583 [C] 3.71 a:752 [G] 87.57
q:37 [LYS] a:876 [C] 4.75 a:818 [G] 87.57
q:38 [SER] a:583 [C] 4.8 a:752 [G] 0.0
q:38 [SER] a:594 [G] 4.23 a:640 [C] 0.0
q:40 [ARG] a:276 [C] 4.21 55.68
q:40 [ARG] a:582 [G] 2.73 a:753 [C] 55.68
q:40 [ARG] a:583 [C] 3.48 a:752 [G] 55.68
q:41 [ARG] a:234 [G] 4.72 a:119 [C] 56.37
q:41 [ARG] a:276 [C] 3.07 sugar:SC 56.37
q:42 [SER] a:276 [C] 3.35 base:BB 52.96
q:43 [THR] a:233 [A] 3.52 a:120 [U] 66.25
q:44 [LYS] a:273 [C] 4.03 a:243 [G] 72.88
q:44 [LYS] a:274 [G] 2.98 a:275 [A] 72.88
q:45 [LEU] a:231 [U] 4.57 a:122 [A] 56.68
q:45 [LEU] a:232 [A] 3.36 a:121 [U] 56.68
q:46 [HIS] a:272 [G] 3.49 a:244 [C] 48.29
q:46 [HIS] a:273 [C] 3.12 a:243 [G] 48.29
q:48 [HIS] a:251 [G] 4.77 a:267 [C] 91.62
q:50 [GLU] a:252 [U] 4.37 a:266 [A] 58.6
q:64 [GLU] a:123 [G] 3.95 a:230 [C] base:SC 67.97
q:64 [GLU] a:124 [G] 4.06 a:229 [C] 67.97
q:64 [GLU] a:230 [C] 4.57 a:123 [G] 67.97
q:64 [GLU] a:231 [U] 4.26 a:122 [A] 67.97
q:65 [SER] a:230 [C] 4.85 a:123 [G] 50.39
q:66 [ARG] a:125 [A] 4.38 a:228 [G] 84.82
q:66 [ARG] a:126 [A] 3.08 84.82
q:66 [ARG] a:260 [A] 2.94 84.82
q:66 [ARG] a:261 [G] 3.56 a:256 [G] 84.82
q:67 [PRO] a:126 [A] 3.89 90.19
q:67 [PRO] a:230 [C] 3.89 a:123 [G] 90.19
q:67 [PRO] a:260 [A] 2.62 sugar:BB 90.19
q:67 [PRO] a:261 [G] 3.66 a:256 [G] 90.19
q:68 [ILE] a:251 [G] 3.93 a:267 [C] 59.97
q:68 [ILE] a:260 [A] 4.75 59.97
q:68 [ILE] a:261 [G] 3.88 a:256 [G] 59.97
q:68 [ILE] a:262 [G] 4.43 59.97
q:69 [SER] a:249 [U] 4.84 a:269 [A] 99.0
q:69 [SER] a:250 [G] 2.46 a:268 [C] 99.0
q:69 [SER] a:251 [G] 3.46 a:267 [C] 99.0
q:69 [SER] a:261 [G] 3.54 a:256 [G] 99.0
q:69 [SER] a:262 [G] 4.6 99.0
q:70 [LYS] a:248 [U] 4.72 a:270 [A] 82.7
q:70 [LYS] a:249 [U] 3.16 a:269 [A] 82.7
q:70 [LYS] a:250 [G] 3.56 a:268 [C] 82.7
q:70 [LYS] a:261 [G] 3.59 a:256 [G] 82.7
q:70 [LYS] a:262 [G] 3.97 82.7
q:70 [LYS] a:263 [C] 3.78 a:255 [G] 82.7
q:71 [THR] a:249 [U] 3.92 a:269 [A] 63.57
q:71 [THR] a:250 [G] 2.98 a:268 [C] 63.57
q:72 [LYS] a:250 [G] 3.47 a:268 [C] 92.23
q:72 [LYS] a:251 [G] 3.07 a:267 [C] 92.23
q:73 [ALA] a:230 [C] 4.52 a:123 [G] 61.71
q:73 [ALA] a:231 [U] 4.05 a:122 [A] 61.71
q:74 [TRP] a:231 [U] 3.58 a:122 [A] sugar:SC 62.9
q:74 [TRP] a:232 [A] 4.77 a:121 [U] 62.9

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group93 7RYG_q_a q: 30s ribosomal protein s17, Acinetobacter baumannii (strain ab0057) (natural) a: 16s ribosomal RNA, Acinetobacter baumannii ab0057 (natural) B7IA30 Nucleic acid-binding proteins Bacterial small subunit ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 4

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6S0X_q_a 7RYG_q_a 0.59 0.97 1.98 0.51 Nucleic acid-binding proteins Bacterial small subunit ribosomal RNA compare
7K00_Q_A 7RYG_q_a 0.95 0.93 2.32 0.71 Nucleic acid-binding proteins Bacterial small subunit ribosomal RNA compare
4Y4O_1q_1a 7RYG_q_a 0.77 0.91 2.82 0.57 Nucleic acid-binding proteins Bacterial small subunit ribosomal RNA compare
2VQE_Q_A 7RYG_q_a 0.76 0.92 2.93 0.57 Nucleic acid-binding proteins Bacterial small subunit ribosomal RNA compare