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All interfaces > All interologs > Interface groups > group94 > 4YBB_AR_AA

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Chain
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Hydrophobicity
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Conservation*

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Contacts -

4YBB_AR
4YBB_AA
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
AR:37 [GLY] AA:719 [C] 4.42 65.86
AR:38 [LYS] AA:718 [A] 3.5 70.81
AR:38 [LYS] AA:719 [C] 3.52 70.81
AR:39 [ILE] AA:719 [C] 2.57 base:BB, sugar:BB 98.95
AR:39 [ILE] AA:720 [C] 3.3 98.95
AR:40 [VAL] AA:719 [C] 4.74 29.88
AR:40 [VAL] AA:720 [C] 4.15 29.88
AR:41 [PRO] AA:719 [C] 4.89 65.89
AR:41 [PRO] AA:720 [C] 3.38 65.89
AR:41 [PRO] AA:721 [G] 3.54 65.89
AR:42 [SER] AA:720 [C] 4.12 73.04
AR:42 [SER] AA:721 [G] 2.59 73.04
AR:43 [ARG] AA:720 [C] 4.82 60.67
AR:43 [ARG] AA:721 [G] 4.46 60.67
AR:43 [ARG] AA:722 [G] 3.58 AA:733 [G] 60.67
AR:48 [ARG] AA:845 [A] 2.25 sugar:SC 69.41
AR:48 [ARG] AA:846 [G] 3.45 AA:840 [C] 69.41
AR:49 [ALA] AA:834 [U] 3.29 AA:852 [G] 55.74
AR:49 [ALA] AA:835 [U] 4.06 AA:851 [G] 55.74
AR:50 [LYS] AA:662 [U] 4.47 AA:743 [A] 61.81
AR:50 [LYS] AA:663 [A] 4.04 AA:742 [G] 61.81
AR:50 [LYS] AA:835 [U] 3.4 AA:851 [G] 61.81
AR:50 [LYS] AA:836 [G] 2.66 AA:850 [U] 61.81
AR:52 [GLN] AA:720 [C] 2.78 sugar:SC 98.95
AR:52 [GLN] AA:721 [G] 3.4 98.95
AR:53 [ARG] AA:663 [A] 3.35 AA:742 [G] 83.8
AR:53 [ARG] AA:664 [G] 2.87 AA:741 [G] 83.8
AR:53 [ARG] AA:665 [A] 4.54 AA:724 [G] 83.8
AR:53 [ARG] AA:834 [U] 4.17 AA:852 [G] 83.8
AR:53 [ARG] AA:835 [U] 2.78 AA:851 [G] 83.8
AR:54 [GLN] AA:663 [A] 4.69 AA:742 [G] 10.07
AR:56 [ALA] AA:720 [C] 3.28 54.67
AR:57 [ARG] AA:735 [C] 4.87 AA:671 [G] 30.36
AR:57 [ARG] AA:736 [C] 3.73 AA:670 [G] 30.36
AR:60 [LYS] AA:719 [C] 3.75 89.36
AR:60 [LYS] AA:720 [C] 2.9 base:SC 89.36
AR:60 [LYS] AA:721 [G] 4.42 89.36
AR:60 [LYS] AA:734 [G] 3.39 AA:672 [U] 89.36
AR:60 [LYS] AA:735 [C] 3.64 AA:671 [G] 89.36
AR:61 [ARG] AA:735 [C] 4.18 AA:671 [G] 69.53
AR:61 [ARG] AA:736 [C] 2.9 AA:670 [G] 69.53
AR:61 [ARG] AA:737 [C] 4.24 AA:669 [G] 69.53
AR:63 [ARG] AA:718 [A] 3.09 99.0
AR:63 [ARG] AA:719 [C] 2.92 base:SC, base:SC 99.0
AR:64 [TYR] AA:672 [U] 2.82 AA:734 [G] sugar:SC 45.3
AR:64 [TYR] AA:673 [A] 3.39 AA:717 [U] 45.3
AR:64 [TYR] AA:734 [G] 4.62 AA:672 [U] 45.3
AR:64 [TYR] AA:735 [C] 4.94 AA:671 [G] 45.3
AR:70 [TYR] AA:673 [A] 2.88 AA:717 [U] 51.64
AR:70 [TYR] AA:674 [G] 3.65 AA:716 [A] 51.64
AR:70 [TYR] AA:675 [A] 4.71 AA:715 [A] 51.64
AR:70 [TYR] AA:718 [A] 4.09 51.64
AR:71 [THR] AA:675 [A] 3.46 AA:715 [A] 40.14
AR:71 [THR] AA:718 [A] 4.95 40.14
AR:74 [HIS] AA:674 [G] 4.28 AA:716 [A] 25.94
AR:74 [HIS] AA:675 [A] 2.63 AA:715 [A] 25.94

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group94 4YBB_AR_AA AR: 30s ribosomal protein s18, Escherichia coli (strain k12) (natural) AA: 16s rRNA, Escherichia coli k-12 (natural) P0A7T7 tri-helical Bacterial small subunit ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 5

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
2VQE_R_A 4YBB_AR_AA 0.84 0.95 2.09 0.58 tri-helical Bacterial small subunit ribosomal RNA compare
4Y4O_1r_1a 4YBB_AR_AA 0.73 0.95 2.78 0.63 tri-helical Bacterial small subunit ribosomal RNA compare
4YBB_AR_AA 6S0X_r_a 0.27 0.96 5.02 0.18 tri-helical Bacterial small subunit ribosomal RNA compare
4YBB_AR_AA 7K00_R_A 0.93 0.97 2.75 1.0 tri-helical Bacterial small subunit ribosomal RNA compare
4YBB_AR_AA 7RYG_r_a 0.91 0.97 1.52 0.85 tri-helical Bacterial small subunit ribosomal RNA compare