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All interfaces > All interologs > Interface groups > group94 > 4YBB_AR_AA vs 7RYG_r_a

Interface analysis


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Common contacts -

4YBB_AR
4YBB_AA
7RYG_r
7RYG_a
Conserved?
AR:39 [ILE] AA:719 [C] r:39 [ILE] a:716 [C] ✔
AR:39 [ILE] AA:720 [C] r:39 [ILE] a:717 [C] ✔
AR:56 [ALA] AA:720 [C] r:56 [ALA] a:717 [C] ✔
AR:60 [LYS] AA:719 [C] r:60 [LYS] a:716 [C] ✔
AR:60 [LYS] AA:720 [C] r:60 [LYS] a:717 [C] ✔
AR:60 [LYS] AA:734 [G] r:60 [LYS] a:731 [G] ✔
AR:60 [LYS] AA:735 [C] r:60 [LYS] a:732 [C] ✔
AR:49 [ALA] AA:834 [U] r:49 [ALA] a:831 [U] ✔
AR:49 [ALA] AA:835 [U] r:49 [ALA] a:832 [G] ✔
AR:53 [ARG] AA:663 [A] r:53 [ARG] a:660 [A] ✔
AR:53 [ARG] AA:664 [G] r:53 [ARG] a:661 [G] ✔
AR:53 [ARG] AA:665 [A] r:53 [ARG] a:662 [A] ✔
AR:53 [ARG] AA:834 [U] r:53 [ARG] a:831 [U] ✔
AR:53 [ARG] AA:835 [U] r:53 [ARG] a:832 [G] ✔
AR:52 [GLN] AA:720 [C] r:52 [GLN] a:717 [C] ✔
AR:52 [GLN] AA:721 [G] r:52 [GLN] a:718 [G] ✔
AR:71 [THR] AA:675 [A] r:71 [THR] a:672 [A] ✔
AR:71 [THR] AA:718 [A] r:71 [THR] a:715 [A] ✔
AR:40 [VAL] AA:720 [C] r:40 [VAL] a:717 [C] ✔
AR:57 [ARG] AA:735 [C] r:57 [LEU] a:732 [C] ✔
AR:57 [ARG] AA:736 [C] r:57 [LEU] a:733 [C] ✔
AR:37 [GLY] AA:719 [C] r:37 [GLY] a:716 [C] ✔
AR:41 [PRO] AA:720 [C] r:41 [PRO] a:717 [C] ✔
AR:41 [PRO] AA:721 [G] r:41 [PRO] a:718 [G] ✔
AR:38 [LYS] AA:718 [A] r:38 [LYS] a:715 [A] ✔
AR:38 [LYS] AA:719 [C] r:38 [LYS] a:716 [C] ✔
AR:70 [TYR] AA:673 [A] r:70 [TYR] a:670 [A] ✔
AR:70 [TYR] AA:674 [G] r:70 [TYR] a:671 [G] ✔
AR:70 [TYR] AA:718 [A] r:70 [TYR] a:715 [A] ✔
AR:42 [SER] AA:720 [C] r:42 [SER] a:717 [C] ✔
AR:42 [SER] AA:721 [G] r:42 [SER] a:718 [G] ✔
AR:61 [ARG] AA:735 [C] r:61 [GLN] a:732 [C] ✔
AR:61 [ARG] AA:736 [C] r:61 [GLN] a:733 [C] ✔
AR:64 [TYR] AA:672 [U] r:64 [TYR] a:669 [U] ✔
AR:64 [TYR] AA:673 [A] r:64 [TYR] a:670 [A] ✔
AR:64 [TYR] AA:735 [C] r:64 [TYR] a:732 [C] ✔
AR:50 [LYS] AA:663 [A] r:50 [ARG] a:660 [A] ✔
AR:50 [LYS] AA:835 [U] r:50 [ARG] a:832 [G] ✔
AR:50 [LYS] AA:836 [G] r:50 [ARG] a:833 [G] ✔
AR:63 [ARG] AA:718 [A] r:63 [ARG] a:715 [A] ✔
AR:63 [ARG] AA:719 [C] r:63 [ARG] a:716 [C] ✔
AR:43 [ARG] AA:722 [G] r:43 [ARG] a:719 [A] ✔
AR:60 [LYS] AA:721 [G] r:60 [LYS] a:718 [G] ❌ 7RYG_r_a
AR:40 [VAL] AA:719 [C] r:40 [VAL] a:716 [C] ❌ 7RYG_r_a
AR:54 [GLN] AA:663 [A] r:54 [GLN] a:660 [A] ❌ 7RYG_r_a
AR:41 [PRO] AA:719 [C] r:41 [PRO] a:716 [C] ❌ 7RYG_r_a
AR:70 [TYR] AA:675 [A] r:70 [TYR] a:672 [A] ❌ 7RYG_r_a
AR:64 [TYR] AA:734 [G] r:64 [TYR] a:731 [G] ❌ 7RYG_r_a
AR:43 [ARG] AA:720 [C] r:43 [ARG] a:717 [C] ❌ 7RYG_r_a
AR:43 [ARG] AA:721 [G] r:43 [ARG] a:718 [G] ❌ 7RYG_r_a
AR:50 [LYS] AA:664 [G] r:50 [ARG] a:661 [G] ❌ 4YBB_AR_AA
AR:54 [GLN] AA:664 [G] r:54 [GLN] a:661 [G] ❌ 4YBB_AR_AA
AR:48 [ARG] AA:845 [A] r:48 [LYS] a:842 [A] ❌ 7RYG_r:48, 7RYG_a:842 no longer at interface
AR:48 [ARG] AA:846 [G] r:48 [LYS] a:843 [G] ❌ 7RYG_r:48, 7RYG_a:843 no longer at interface
AR:61 [ARG] AA:737 [C] r:61 [GLN] a:734 [A] ❌ 7RYG_a:734 no longer at interface
AR:50 [LYS] AA:662 [U] r:50 [ARG] a:659 [G] ❌ 7RYG_a:659 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
tri-helical Bacterial small subunit ribosomal RNA 0.97 1.52 0.85 0.97 0.97 1.0 1.0 0.91 0.85 0.53 0.29


Other pairs involving 4YBB_AR_AA or 7RYG_r_a

Total number of entries: 9

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
7K00_R_A 7RYG_r_a 0.91 0.92 1.59 0.8 tri-helical Bacterial small subunit ribosomal RNA compare
2VQE_R_A 7RYG_r_a 0.87 0.92 1.92 0.47 tri-helical Bacterial small subunit ribosomal RNA compare
2VQE_R_A 4YBB_AR_AA 0.84 0.95 2.09 0.58 tri-helical Bacterial small subunit ribosomal RNA compare
6S0X_r_a 7RYG_r_a 0.45 0.96 4.7 0.35 tri-helical Bacterial small subunit ribosomal RNA compare
4YBB_AR_AA 6S0X_r_a 0.27 0.96 5.02 0.18 tri-helical Bacterial small subunit ribosomal RNA compare
4YBB_AR_AA 7K00_R_A 0.93 0.97 2.75 1.0 tri-helical Bacterial small subunit ribosomal RNA compare
4YBB_AR_AA 7RYG_r_a 0.91 0.97 1.52 0.85 tri-helical Bacterial small subunit ribosomal RNA compare
4Y4O_1r_1a 7RYG_r_a 0.87 0.91 2.0 0.53 tri-helical Bacterial small subunit ribosomal RNA compare
4Y4O_1r_1a 4YBB_AR_AA 0.73 0.95 2.78 0.63 tri-helical Bacterial small subunit ribosomal RNA compare