RNAprotDB

All interfaces > All interologs > Interface groups > group96 > 6S0X_m_a vs 7O7Y_Ar_A2

Interface analysis


mouse controls

Style

Protein

Cartoon
Licorice
Surface

RNA

Cartoon
Licorice
Surface

Color

Structure
Structure (with hetatm)
Chain
Chainbow

View

Focus on

Interface
RNA
Protein
All

Show chains

Interface

show interface as licorice

Common contacts -

6S0X_m
6S0X_a
7O7Y_Ar
7O7Y_A2
Conserved?
m:108 [THR] a:956 [G] Ar:142 [ARG] A2:1230 [G] ✔
m:23 [TYR] a:1340 [U] Ar:33 [ILE] A2:1632 [U] ✔
m:20 [THR] a:1312 [U] Ar:28 [PHE] A2:1604 [G] ✔
m:101 [LYS] a:958 [A] Ar:134 [GLN] A2:1232 [C] ✔
m:24 [GLY] a:1339 [A] Ar:36 [VAL] A2:1631 [A] ✔
m:24 [GLY] a:1340 [U] Ar:36 [VAL] A2:1632 [U] ✔
m:95 [LEU] a:1236 [C] Ar:129 [LEU] A2:1522 [C] ✔
m:95 [LEU] a:1237 [A] Ar:129 [LEU] A2:1523 [A] ✔
m:28 [SER] a:1338 [C] Ar:40 [TYR] A2:1630 [C] ✔
m:28 [SER] a:1339 [A] Ar:40 [TYR] A2:1631 [A] ✔
m:107 [ARG] a:957 [C] Ar:141 [ARG] A2:1231 [C] ✔
m:107 [ARG] a:1238 [C] Ar:141 [ARG] A2:1524 [C] ✔
m:107 [ARG] a:1239 [A] Ar:141 [ARG] A2:1525 [G] ✔
m:104 [ASN] a:961 [U] Ar:138 [THR] A2:1235 [C] ✔
m:104 [ASN] a:1239 [A] Ar:138 [THR] A2:1525 [G] ✔
m:104 [ASN] a:1240 [C] Ar:138 [THR] A2:1526 [C] ✔
m:17 [ILE] a:1312 [U] Ar:25 [LYS] A2:1604 [G] ✔
m:105 [ASN] a:957 [C] Ar:139 [THR] A2:1231 [C] ✔
m:105 [ASN] a:958 [A] Ar:139 [THR] A2:1232 [C] ✔
m:105 [ASN] a:959 [U] Ar:139 [THR] A2:1233 [PSU] ✔
m:103 [LYS] a:1234 [U] Ar:136 [THR] A2:1520 [U] ✔
m:103 [LYS] a:1235 [A] Ar:136 [THR] A2:1521 [G] ✔
m:103 [LYS] a:1236 [C] Ar:136 [THR] A2:1522 [C] ✔
m:80 [LEU] a:1319 [G] Ar:110 [ASP] A2:1611 [G] ✔
m:80 [LEU] a:1320 [U] Ar:110 [ASP] A2:1612 [G] ✔
m:99 [GLY] a:1331 [U] Ar:132 [ARG] A2:1623 [U] ✔
m:99 [GLY] a:1332 [C] Ar:132 [ARG] A2:1624 [A] ✔
m:96 [PRO] a:1318 [U] Ar:130 [ARG] A2:1610 [C] ✔
m:26 [GLY] a:1339 [A] Ar:38 [ARG] A2:1631 [A] ✔
m:106 [ALA] a:957 [C] Ar:140 [GLY] A2:1231 [C] ✔
m:77 [ILE] a:1318 [U] Ar:107 [LEU] A2:1610 [C] ✔
m:77 [ILE] a:1319 [G] Ar:107 [LEU] A2:1611 [G] ✔
m:97 [VAL] a:1318 [U] Ar:131 [VAL] A2:1610 [C] ✔
m:97 [VAL] a:1319 [G] Ar:131 [VAL] A2:1611 [G] ✔
m:97 [VAL] a:1331 [U] Ar:131 [VAL] A2:1623 [U] ✔
m:27 [THR] a:1337 [A] Ar:39 [ARG] A2:1629 [C] ✔
m:27 [THR] a:1338 [C] Ar:39 [ARG] A2:1630 [C] ✔
m:27 [THR] a:1339 [A] Ar:39 [ARG] A2:1631 [A] ✔
m:13 [LYS] a:1311 [U] Ar:24 [ARG] A2:1603 [U] ✔
m:13 [LYS] a:1312 [U] Ar:24 [ARG] A2:1604 [G] ✔
m:110 [LYS] a:1237 [A] Ar:144 [ARG] A2:1523 [A] ✔
m:110 [LYS] a:1238 [C] Ar:144 [ARG] A2:1524 [C] ✔
m:102 [THR] a:1234 [U] Ar:135 [HIS] A2:1520 [U] ✔
m:102 [THR] a:1235 [A] Ar:135 [HIS] A2:1521 [G] ✔
m:100 [GLN] a:1234 [U] Ar:133 [GLY] A2:1520 [U] ✔
m:100 [GLN] a:1332 [C] Ar:133 [GLY] A2:1624 [A] ✔
m:25 [ILE] a:1339 [A] Ar:37 [GLY] A2:1631 [A] ✔
m:25 [ILE] a:1340 [U] Ar:37 [GLY] A2:1632 [U] ✔
m:108 [THR] a:957 [C] Ar:142 [ARG] A2:1231 [C] ❌ 7O7Y_Ar_A2
m:23 [TYR] a:1339 [A] Ar:33 [ILE] A2:1631 [A] ❌ 7O7Y_Ar_A2
m:23 [TYR] a:1341 [G] Ar:33 [ILE] A2:1633 [G] ❌ 7O7Y_Ar_A2
m:73 [THR] a:1319 [G] Ar:103 [LEU] A2:1611 [G] ❌ 7O7Y_Ar_A2
m:20 [THR] a:1340 [U] Ar:28 [PHE] A2:1632 [U] ❌ 7O7Y_Ar_A2
m:20 [THR] a:1341 [G] Ar:28 [PHE] A2:1633 [G] ❌ 7O7Y_Ar_A2
m:101 [LYS] a:959 [U] Ar:134 [GLN] A2:1233 [PSU] ❌ 7O7Y_Ar_A2
m:101 [LYS] a:1234 [U] Ar:134 [GLN] A2:1520 [U] ❌ 7O7Y_Ar_A2
m:101 [LYS] a:1235 [A] Ar:134 [GLN] A2:1521 [G] ❌ 7O7Y_Ar_A2
m:24 [GLY] a:1338 [C] Ar:36 [VAL] A2:1630 [C] ❌ 7O7Y_Ar_A2
m:107 [ARG] a:956 [G] Ar:141 [ARG] A2:1230 [G] ❌ 7O7Y_Ar_A2
m:104 [ASN] a:1238 [C] Ar:138 [THR] A2:1524 [C] ❌ 7O7Y_Ar_A2
m:17 [ILE] a:1311 [U] Ar:25 [LYS] A2:1603 [U] ❌ 7O7Y_Ar_A2
m:103 [LYS] a:960 [G] Ar:136 [THR] A2:1234 [G] ❌ 7O7Y_Ar_A2
m:103 [LYS] a:961 [U] Ar:136 [THR] A2:1235 [C] ❌ 7O7Y_Ar_A2
m:103 [LYS] a:962 [G] Ar:136 [THR] A2:1236 [G] ❌ 7O7Y_Ar_A2
m:103 [LYS] a:963 [G] Ar:136 [THR] A2:1237 [G] ❌ 7O7Y_Ar_A2
m:103 [LYS] a:1238 [C] Ar:136 [THR] A2:1524 [C] ❌ 7O7Y_Ar_A2
m:99 [GLY] a:1234 [U] Ar:132 [ARG] A2:1520 [U] ❌ 7O7Y_Ar_A2
m:99 [GLY] a:1235 [A] Ar:132 [ARG] A2:1521 [G] ❌ 7O7Y_Ar_A2
m:96 [PRO] a:958 [A] Ar:130 [ARG] A2:1232 [C] ❌ 7O7Y_Ar_A2
m:96 [PRO] a:1236 [C] Ar:130 [ARG] A2:1522 [C] ❌ 7O7Y_Ar_A2
m:26 [GLY] a:1340 [U] Ar:38 [ARG] A2:1632 [U] ❌ 7O7Y_Ar_A2
m:26 [GLY] a:1341 [G] Ar:38 [ARG] A2:1633 [G] ❌ 7O7Y_Ar_A2
m:106 [ALA] a:956 [G] Ar:140 [GLY] A2:1230 [G] ❌ 7O7Y_Ar_A2
m:106 [ALA] a:958 [A] Ar:140 [GLY] A2:1232 [C] ❌ 7O7Y_Ar_A2
m:97 [VAL] a:1317 [U] Ar:131 [VAL] A2:1609 [U] ❌ 7O7Y_Ar_A2
m:27 [THR] a:1340 [U] Ar:39 [ARG] A2:1632 [U] ❌ 7O7Y_Ar_A2
m:27 [THR] a:1341 [G] Ar:39 [ARG] A2:1633 [G] ❌ 7O7Y_Ar_A2
m:110 [LYS] a:1236 [C] Ar:144 [ARG] A2:1522 [C] ❌ 7O7Y_Ar_A2
m:102 [THR] a:1236 [C] Ar:135 [HIS] A2:1522 [C] ❌ 7O7Y_Ar_A2
m:102 [THR] a:1238 [C] Ar:135 [HIS] A2:1524 [C] ❌ 7O7Y_Ar_A2
m:100 [GLN] a:958 [A] Ar:133 [GLY] A2:1232 [C] ❌ 7O7Y_Ar_A2
m:100 [GLN] a:959 [U] Ar:133 [GLY] A2:1233 [PSU] ❌ 7O7Y_Ar_A2
m:100 [GLN] a:1235 [A] Ar:133 [GLY] A2:1521 [G] ❌ 7O7Y_Ar_A2
m:100 [GLN] a:1317 [U] Ar:133 [GLY] A2:1609 [U] ❌ 7O7Y_Ar_A2
m:100 [GLN] a:1318 [U] Ar:133 [GLY] A2:1610 [C] ❌ 7O7Y_Ar_A2
m:73 [THR] a:1340 [U] Ar:103 [LEU] A2:1632 [U] ❌ 6S0X_m_a
m:73 [THR] a:1339 [A] Ar:103 [LEU] A2:1631 [A] ❌ 6S0X_m_a
m:95 [LEU] a:1318 [U] Ar:129 [LEU] A2:1610 [C] ❌ 6S0X_m_a
m:96 [PRO] a:1317 [U] Ar:130 [ARG] A2:1609 [U] ❌ 6S0X_m_a
m:96 [PRO] a:957 [C] Ar:130 [ARG] A2:1231 [C] ❌ 6S0X_m_a
m:96 [PRO] a:956 [G] Ar:130 [ARG] A2:1230 [G] ❌ 6S0X_m_a
m:97 [VAL] a:1332 [C] Ar:131 [VAL] A2:1624 [A] ❌ 6S0X_m_a
m:99 [GLY] a:1318 [U] Ar:132 [ARG] A2:1610 [C] ❌ 6S0X_m_a
m:99 [GLY] a:1319 [G] Ar:132 [ARG] A2:1611 [G] ❌ 6S0X_m_a
m:100 [GLN] a:1331 [U] Ar:133 [GLY] A2:1623 [U] ❌ 6S0X_m_a
m:101 [LYS] a:1317 [U] Ar:134 [GLN] A2:1609 [U] ❌ 6S0X_m_a
m:101 [LYS] a:1318 [U] Ar:134 [GLN] A2:1610 [C] ❌ 6S0X_m_a
m:102 [THR] a:959 [U] Ar:135 [HIS] A2:1233 [PSU] ❌ 6S0X_m_a
m:102 [THR] a:960 [G] Ar:135 [HIS] A2:1234 [G] ❌ 6S0X_m_a
m:102 [THR] a:958 [A] Ar:135 [HIS] A2:1232 [C] ❌ 6S0X_m_a
m:104 [ASN] a:959 [U] Ar:138 [THR] A2:1233 [PSU] ❌ 6S0X_m_a
m:104 [ASN] a:960 [G] Ar:138 [THR] A2:1234 [G] ❌ 6S0X_m_a
m:107 [ARG] a:1240 [C] Ar:141 [ARG] A2:1526 [C] ❌ 6S0X_m_a
m:107 [ARG] a:962 [G] Ar:141 [ARG] A2:1236 [G] ❌ 6S0X_m_a
m:17 [ILE] a:1305 [U] Ar:25 [LYS] A2:1597 [U] ❌ 6S0X_m_a
m:17 [ILE] a:1306 [C] Ar:25 [LYS] A2:1598 [C] ❌ 6S0X_m_a
m:26 [GLY] a:1312 [U] Ar:38 [ARG] A2:1604 [G] ❌ 6S0X_m_a
m:105 [ASN] a:1241 [G] Ar:139 [THR] A2:1527 [G] ❌ 7O7Y_A2:1527 no longer at interface
m:103 [LYS] a:964 [U] Ar:136 [THR] A2:1238 [C] ❌ 7O7Y_A2:1238 no longer at interface
m:99 [GLY] a:1333 [G] Ar:132 [ARG] A2:1625 [U] ❌ 7O7Y_A2:1625 no longer at interface
m:100 [GLN] a:1333 [G] Ar:133 [GLY] A2:1625 [U] ❌ 7O7Y_A2:1625 no longer at interface
m:96 [PRO] a:1316 [A] Ar:130 [ARG] A2:1608 [A] ❌ 6S0X_a:1316 no longer at interface
m:108 [THR] a:1343 [A] Ar:142 [ARG] A2:1635 [A] ❌ 6S0X_a:1343 no longer at interface
m:108 [THR] a:1342 [A] Ar:142 [ARG] A2:1634 [A] ❌ 6S0X_a:1342 no longer at interface
m:108 [THR] a:955 [A] Ar:142 [ARG] A2:1229 [A] ❌ 6S0X_a:955 no longer at interface
m:12 [GLU] a:1307 [U] Ar:23 [ARG] A2:1599 [G] ❌ 6S0X_m:12, 6S0X_a:1307 no longer at interface
m:26 [GLY] a:1313 [C] Ar:38 [ARG] A2:1605 [G] ❌ 6S0X_a:1313 no longer at interface
m:26 [GLY] a:1315 [G] Ar:38 [ARG] A2:1607 [G] ❌ 6S0X_a:1315 no longer at interface
m:44 [ARG] a:1307 [U] Ar:55 [ARG] A2:1599 [G] ❌ 6S0X_m:44, 6S0X_a:1307 no longer at interface
m:32 [LYS] a:1277 [C] Ar:43 [VAL] A2:1568 [G] ❌ 7O7Y_Ar:43 no longer at interface
m:32 [LYS] a:1338 [C] Ar:43 [VAL] A2:1630 [C] ❌ 7O7Y_Ar:43 no longer at interface
m:94 [GLY] a:1236 [C] Ar:128 [GLY] A2:1522 [C] ❌ 7O7Y_Ar:128 no longer at interface
m:94 [GLY] a:1237 [A] Ar:128 [GLY] A2:1523 [A] ❌ 7O7Y_Ar:128 no longer at interface
m:79 [ARG] a:1320 [U] Ar:109 [GLU] A2:1612 [G] ❌ 7O7Y_Ar:109 no longer at interface
m:63 [TYR] a:1339 [A] Ar:71 [MET] A2:1631 [A] ❌ 7O7Y_Ar:71 no longer at interface
m:109 [ARG] a:957 [C] Ar:143 [GLY] A2:1231 [C] ❌ 7O7Y_Ar:143 no longer at interface
m:22 [ILE] a:1339 [A] Ar:30 [ILE] A2:1631 [A] ❌ 7O7Y_Ar:30 no longer at interface
m:22 [ILE] a:1340 [U] Ar:30 [ILE] A2:1632 [U] ❌ 7O7Y_Ar:30 no longer at interface
m:22 [ILE] a:1341 [G] Ar:30 [ILE] A2:1633 [G] ❌ 7O7Y_Ar:30 no longer at interface
m:86 [TYR] a:1235 [A] Ar:119 [ALA] A2:1521 [G] ❌ 7O7Y_Ar:119 no longer at interface
m:86 [TYR] a:1236 [C] Ar:119 [ALA] A2:1522 [C] ❌ 7O7Y_Ar:119 no longer at interface
m:86 [TYR] a:1330 [C] Ar:119 [ALA] A2:1622 [U] ❌ 7O7Y_Ar:119 no longer at interface
m:86 [TYR] a:1331 [U] Ar:119 [ALA] A2:1623 [U] ❌ 7O7Y_Ar:119 no longer at interface
m:21 [TYR] a:1311 [U] Ar:29 [ALA] A2:1603 [U] ❌ 7O7Y_Ar:29 no longer at interface
m:21 [TYR] a:1312 [U] Ar:29 [ALA] A2:1604 [G] ❌ 7O7Y_Ar:29 no longer at interface
m:21 [TYR] a:1340 [U] Ar:29 [ALA] A2:1632 [U] ❌ 7O7Y_Ar:29 no longer at interface
m:21 [TYR] a:1341 [G] Ar:29 [ALA] A2:1633 [G] ❌ 7O7Y_Ar:29 no longer at interface
m:33 [ILE] a:1339 [A] Ar:44 [VAL] A2:1631 [A] ❌ 7O7Y_Ar:44 no longer at interface
m:69 [LEU] a:1339 [A] Ar:98 [VAL] A2:1631 [A] ❌ 7O7Y_Ar:98 no longer at interface
m:18 [SER] a:1312 [U] Ar:26 [ILE] A2:1604 [G] ❌ 7O7Y_Ar:26 no longer at interface
m:81 [MET] a:1319 [G] Ar:111 [LEU] A2:1611 [G] ❌ 6S0X_m:81 no longer at interface
m:83 [ILE] a:1320 [U] Ar:113 [ARG] A2:1612 [G] ❌ 6S0X_m:83 no longer at interface
m:84 [SER] a:1320 [U] Ar:114 [LEU] A2:1612 [G] ❌ 6S0X_m:84 no longer at interface
m:84 [SER] a:1319 [G] Ar:114 [LEU] A2:1611 [G] ❌ 6S0X_m:84 no longer at interface
m:88 [GLY] a:1320 [U] Ar:121 [ARG] A2:1612 [G] ❌ 6S0X_m:88 no longer at interface
m:88 [GLY] a:1318 [U] Ar:121 [ARG] A2:1610 [C] ❌ 6S0X_m:88 no longer at interface
m:88 [GLY] a:1331 [U] Ar:121 [ARG] A2:1623 [U] ❌ 6S0X_m:88 no longer at interface
m:88 [GLY] a:1319 [G] Ar:121 [ARG] A2:1611 [G] ❌ 6S0X_m:88 no longer at interface
m:92 [ARG] a:1318 [U] Ar:125 [HIS] A2:1610 [C] ❌ 6S0X_m:92 no longer at interface
m:92 [ARG] a:1319 [G] Ar:125 [HIS] A2:1611 [G] ❌ 6S0X_m:92 no longer at interface
m:44 [ARG] a:1306 [C] Ar:55 [ARG] A2:1598 [C] ❌ 6S0X_m:44 no longer at interface
m:68 [ASP] a:1339 [A] Ar:97 [GLN] A2:1631 [A] ❌ 6S0X_m:68 no longer at interface
m:68 [ASP] a:1338 [C] Ar:97 [GLN] A2:1630 [C] ❌ 6S0X_m:68 no longer at interface

logo_download Export the table of contacts

Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
H2TH 0.89 4.78 0.07 0.76 0.89 0.59 0.89 0.43 0.23 0.09 0.44


Other pairs involving 6S0X_m_a or 7O7Y_Ar_A2

Total number of entries: 8

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4W2F_AM_AA 6S0X_m_a 0.32 0.94 4.98 0.11 H2TH Bacterial small subunit ribosomal RNA compare
4Y4O_1m_1a 6S0X_m_a 0.31 0.94 5.62 0.11 H2TH Bacterial small subunit ribosomal RNA compare
6S0X_m_a 7K00_M_A 0.33 0.94 5.26 0.2 H2TH Bacterial small subunit ribosomal RNA compare
7K00_M_A 7O7Y_Ar_A2 0.73 0.92 1.92 0.44 H2TH compare
6S0X_m_a 7O7Y_Ar_A2 0.43 0.89 4.78 0.07 H2TH compare
4W2F_AM_AA 7O7Y_Ar_A2 0.77 0.93 1.79 0.4 H2TH compare
4Y4O_1m_1a 7O7Y_Ar_A2 0.73 0.93 2.02 0.4 H2TH compare
6S0X_m_a 7RYG_m_a 0.54 0.95 4.63 0.3 H2TH Bacterial small subunit ribosomal RNA compare