RNAprotDB

Interface analysis

Contacts -

6XZ7_M	6XZ7_g	Distance	Base Pair	Residue conservation
M:47 [GLU]	g:54 [5MU]	4.15		83.02
M:50 [ARG]	g:54 [5MU]	3.41		85.86
M:50 [ARG]	g:55 [PSU]	2.88	g:18 [G]	85.86
M:51 [ARG]	g:54 [5MU]	4.14		62.17
M:54 [THR]	g:55 [PSU]	3.29	g:18 [G]	35.86
M:55 [ARG]	g:53 [G]	3.8	g:61 [C]	80.18
M:55 [ARG]	g:54 [5MU]	2.66		80.18
M:59 [ARG]	g:55 [PSU]	3.45	g:18 [G]	67.53
M:59 [ARG]	g:56 [C]	2.97	g:19 [G]	67.53
M:59 [ARG]	g:57 [G]	3.1		67.53

Export the table of contacts

*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID	Structure ID	Structure description	UniProt ID	ECOD label(s)	RFAM label(s)	Is ribosome?	RCSB PDB link
group97	6XZ7_M_g	M: 50s ribosomal protein l16, Escherichia coli (strain k12) (natural) g: Fmet-phe-tRNA(phe), Saccharomyces cerevisiae (natural)	P0ADY7	Ribosomal protein L10e	tRNA	✔

Interologs

Interface 1	Interface 2	Percentage conservation	Interface TM-score	Interface RMSD	Percentage identity	Common ECOD label(s)	Common RFAM label(s)	Explore both interfaces
4W2F_BQ_AW	6XZ7_M_g	0.58	0.91	1.0	0.2	Ribosomal protein L10e	tRNA	compare
6XHV_1Q_1w	6XZ7_M_g	0.60	0.9	1.19	0.2	Ribosomal protein L10e	tRNA	compare
6XZ7_M_g	7PJS_M_w	0.96	0.98	0.22	1.0	Ribosomal protein L10e	tRNA	compare
6XZ7_M_g	7N1P_LP_Pt	0.95	0.98	0.31	1.0	Ribosomal protein L10e	tRNA	compare

Interface 1

Interface 2

Percentage conservation

Interface TM-score

Interface RMSD

Percentage identity

Common ECOD label(s)

Common RFAM label(s)

Explore both interfaces

4W2F_BQ_AW

6XZ7_M_g

0.58