RNAprotDB

Interface analysis

6XZ7_M	6XZ7_g	7N1P_LP	7N1P_Pt	Conserved?
M:51 [ARG]	g:54 [5MU]	LP:51 [ARG]	Pt:54 [5MU]	✔
M:50 [ARG]	g:54 [5MU]	LP:50 [ARG]	Pt:54 [5MU]	✔
M:50 [ARG]	g:55 [PSU]	LP:50 [ARG]	Pt:55 [PSU]	✔
M:55 [ARG]	g:53 [G]	LP:55 [ARG]	Pt:53 [G]	✔
M:55 [ARG]	g:54 [5MU]	LP:55 [ARG]	Pt:54 [5MU]	✔
M:47 [GLU]	g:54 [5MU]	LP:47 [GLU]	Pt:54 [5MU]	✔
M:54 [THR]	g:55 [PSU]	LP:54 [THR]	Pt:55 [PSU]	✔
M:59 [ARG]	g:55 [PSU]	LP:59 [ARG]	Pt:55 [PSU]	✔
M:59 [ARG]	g:56 [C]	LP:59 [ARG]	Pt:56 [C]	✔
M:59 [ARG]	g:57 [G]	LP:59 [ARG]	Pt:57 [G]	✔
M:51 [ARG]	g:53 [G]	LP:51 [ARG]	Pt:53 [G]	❌ 6XZ7_M_g
M:55 [ARG]	g:52 [U]	LP:55 [ARG]	Pt:52 [G]	❌ 6XZ7_g:52 no longer at interface

Export the table of contacts

Common ECOD label(s)	Common RFAM label(s)	Interface TM-score	Interface RMSD	Percentage identity	Protein TM-score	RNA TM-score	Protein coverage	RNA coverage	Percentage conservation	Apolar conservation	H-bond conservation	Percentage switching out
Ribosomal protein L10e	tRNA	0.98	0.31	1.00	1.0	0.88	1.0	1.0	0.95	0.84	1.00	0.50

Other pairs involving 6XZ7_M_g or 7N1P_LP_Pt

Interface 1	Interface 2	Percentage conservation	Interface TM-score	Interface RMSD	Percentage identity	Common ECOD label(s)	Common RFAM label(s)	Explore both interfaces
4W2F_BQ_AW	6XZ7_M_g	0.58	0.91	1.0	0.2	Ribosomal protein L10e	tRNA	compare
4W2F_BQ_AW	7N1P_LP_Pt	0.63	0.91	0.99	0.2	Ribosomal protein L10e	tRNA	compare
6XZ7_M_g	7PJS_M_w	0.96	0.98	0.22	1.0	Ribosomal protein L10e	tRNA	compare
6XZ7_M_g	7N1P_LP_Pt	0.95	0.98	0.31	1.0	Ribosomal protein L10e	tRNA	compare
6XHV_1Q_1w	7N1P_LP_Pt	0.64	0.91	1.18	0.2	Ribosomal protein L10e	tRNA	compare
6XHV_1Q_1w	6XZ7_M_g	0.60	0.9	1.19	0.2	Ribosomal protein L10e	tRNA	compare

Interface 1

Interface 2

Percentage conservation

Interface TM-score

Interface RMSD

Percentage identity

Common ECOD label(s)

Common RFAM label(s)

Explore both interfaces

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