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All interfaces > All interologs > Interface groups > group97 > 7PJS_M_w

Interface analysis

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Protein

Cartoon
Licorice
Surface

RNA

Cartoon
Licorice
Surface

Color

Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Interface

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Rim - Core

Contacts -

7PJS_M
7PJS_w
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
M:47 [GLU] w:54 [5MU] 4.5 w:58 [A] 83.02
M:50 [ARG] w:54 [5MU] 3.22 w:58 [A] 85.86
M:50 [ARG] w:55 [PSU] 3.21 85.86
M:51 [ARG] w:53 [G] 4.03 w:61 [C] 62.17
M:51 [ARG] w:54 [5MU] 3.56 w:58 [A] 62.17
M:54 [THR] w:54 [5MU] 4.94 w:58 [A] 35.86
M:54 [THR] w:55 [PSU] 3.15 35.86
M:55 [ARG] w:53 [G] 3.36 w:61 [C] 80.18
M:55 [ARG] w:54 [5MU] 3.12 w:58 [A] 80.18
M:59 [ARG] w:55 [PSU] 3.23 67.53
M:59 [ARG] w:56 [C] 3.12 67.53
M:59 [ARG] w:57 [G] 2.48 67.53

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group97 7PJS_M_w M: 50s ribosomal protein l16, Escherichia coli (natural) w: P-site fmet-phe-tRNA(phe), Escherichia coli (natural) P0ADY7 Ribosomal protein L10e tRNA ✔

Interologs

Total number of interologs for this interface: 3

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4W2F_BQ_AW 7PJS_M_w 0.62 0.92 1.02 0.2 Ribosomal protein L10e tRNA compare
6XZ7_M_g 7PJS_M_w 0.96 0.98 0.22 1.0 Ribosomal protein L10e tRNA compare
6XHV_1Q_1w 7PJS_M_w 0.63 0.91 1.24 0.2 Ribosomal protein L10e tRNA compare