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All interfaces > All interologs > Interface groups > group98 > 7OF0_0_A

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Licorice
Surface

RNA

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Licorice
Surface

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Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

7OF0_0
7OF0_A
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
0:79 [ALA] A:2678 [A] 4.15 A:2308 [A] 95.2
0:79 [ALA] A:2717 [A] 4.53 A:3102 [U] 95.2
0:79 [ALA] A:2719 [G] 3.76 A:3099 [C] 95.2
0:79 [ALA] A:3064 [A] 3.52 95.2
0:79 [ALA] A:3099 [C] 3.87 A:2719 [G] 95.2
0:79 [ALA] A:3100 [U] 4.6 A:2676 [A] 95.2
0:79 [ALA] A:3101 [A] 3.54 95.2
0:79 [ALA] A:3102 [U] 3.16 A:2717 [A] 95.2
0:80 [ALA] A:2678 [A] 3.57 A:2308 [A] 92.27
0:80 [ALA] A:2679 [U] 3.53 A:2307 [U] 92.27
0:80 [ALA] A:2719 [G] 4.57 A:3099 [C] 92.27
0:80 [ALA] A:2720 [A] 4.07 A:3098 [U] 92.27
0:80 [ALA] A:3102 [U] 3.49 A:2717 [A] 92.27
0:81 [PRO] A:2308 [A] 3.2 A:2678 [A] 94.93
0:81 [PRO] A:2678 [A] 3.46 A:2308 [A] 94.93
0:81 [PRO] A:2679 [U] 2.26 A:2307 [U] sugar:BB 94.93
0:81 [PRO] A:2680 [U] 3.95 A:2306 [A] 94.93
0:81 [PRO] A:3102 [U] 3.48 A:2717 [A] 94.93
0:82 [LYS] A:2679 [U] 4.46 A:2307 [U] 90.11
0:82 [LYS] A:2680 [U] 3.25 A:2306 [A] 90.11
0:82 [LYS] A:2681 [G] 4.47 A:1827 [C] 90.11
0:82 [LYS] A:2717 [A] 3.76 A:3102 [U] 90.11
0:82 [LYS] A:2718 [C] 2.88 90.11
0:82 [LYS] A:2719 [G] 2.41 A:3099 [C] sugar:SC 90.11
0:82 [LYS] A:2720 [A] 3.44 A:3098 [U] 90.11
0:82 [LYS] A:3102 [U] 3.35 A:2717 [A] 90.11
0:83 [ASN] A:2307 [U] 4.32 A:2679 [U] 56.91
0:83 [ASN] A:2680 [U] 3.45 A:2306 [A] 56.91
0:83 [ASN] A:2681 [G] 4.69 A:1827 [C] 56.91
0:83 [ASN] A:2682 [A] 3.83 A:2698 [G] base:SC 56.91
0:83 [ASN] A:2683 [C] 2.71 A:2697 [G] base:SC 56.91
0:83 [ASN] A:2685 [U] 3.47 56.91
0:83 [ASN] A:3102 [U] 4.61 A:2717 [A] 56.91
0:84 [ARG] A:1816 [G] 4.25 A:1672 [C] 97.66
0:84 [ARG] A:1817 [C] 3.34 A:1671 [G] 97.66
0:84 [ARG] A:1860 [A] 3.83 A:2305 [U] 97.66
0:84 [ARG] A:2306 [A] 2.69 A:2680 [U] base:SC, sugar:SC 97.66
0:84 [ARG] A:2307 [U] 3.47 A:2679 [U] 97.66
0:84 [ARG] A:2680 [U] 2.83 A:2306 [A] sugar:BB 97.66
0:84 [ARG] A:2682 [A] 4.24 A:2698 [G] 97.66
0:84 [ARG] A:2683 [C] 4.23 A:2697 [G] 97.66
0:84 [ARG] A:2685 [U] 4.62 97.66
0:85 [ARG] A:2307 [U] 3.11 A:2679 [U] sugar:BB 86.37
0:85 [ARG] A:2308 [A] 2.83 A:2678 [A] 86.37
0:85 [ARG] A:2309 [A] 3.79 A:2677 [A] 86.37
0:85 [ARG] A:3102 [U] 3.09 A:2717 [A] 86.37
0:85 [ARG] A:3103 [C] 3.63 A:2716 [G] 86.37
0:86 [THR] A:2683 [C] 3.33 A:2697 [G] 90.22
0:86 [THR] A:2684 [C] 2.49 90.22
0:87 [ILE] A:1817 [C] 3.24 A:1671 [G] 58.94
0:87 [ILE] A:1818 [A] 4.11 58.94
0:88 [GLU] A:1821 [A] 3.91 sugar:BB 85.02
0:88 [GLU] A:2684 [C] 4.21 85.02
0:89 [VAL] A:2684 [C] 3.43 65.42
0:89 [VAL] A:2709 [A] 3.77 65.42
0:90 [ASN] A:2307 [U] 3.59 A:2679 [U] 93.31
0:90 [ASN] A:2308 [A] 2.88 A:2678 [A] 93.31
0:91 [ARG] A:1817 [C] 4.95 A:1671 [G] 63.79
0:91 [ARG] A:1818 [A] 2.76 63.79
0:91 [ARG] A:1821 [A] 3.77 63.79
0:92 [CYS] A:1821 [A] 3.06 52.55
0:92 [CYS] A:1822 [U] 3.21 52.55
0:92 [CYS] A:2708 [C] 3.06 sugar:BB 52.55
0:92 [CYS] A:2709 [A] 3.99 52.55
0:93 [ARG] A:2308 [A] 2.76 A:2678 [A] 94.57
0:93 [ARG] A:2309 [A] 4.26 A:2677 [A] 94.57
0:93 [ARG] A:2310 [G] 2.76 A:2311 [U] 94.57
0:93 [ARG] A:2708 [C] 3.91 94.57
0:93 [ARG] A:2709 [A] 3.53 94.57
0:93 [ARG] A:2710 [C] 3.63 94.57
0:94 [ARG] A:2307 [U] 3.6 A:2679 [U] 75.63
0:94 [ARG] A:2308 [A] 3.81 A:2678 [A] 75.63
0:94 [ARG] A:2309 [A] 4.3 A:2677 [A] 75.63
0:94 [ARG] A:2310 [G] 2.44 A:2311 [U] 75.63
0:95 [ARG] A:1817 [C] 4.81 A:1671 [G] 66.64
0:95 [ARG] A:1818 [A] 2.69 66.64
0:95 [ARG] A:1819 [U] 2.69 66.64
0:95 [ARG] A:1820 [A] 3.43 66.64
0:95 [ARG] A:1821 [A] 2.61 66.64
0:96 [ASN] A:1821 [A] 4.23 46.19
0:96 [ASN] A:2708 [C] 2.39 sugar:SC 46.19
0:96 [ASN] A:2709 [A] 3.48 46.19
0:97 [PRO] A:1821 [A] 3.74 4.29
0:98 [GLN] A:2709 [A] 2.41 sugar:SC 19.38
0:98 [GLN] A:2710 [C] 3.85 19.38
0:98 [GLN] A:3221 [A] 4.86 19.38
0:99 [LYS] A:2709 [A] 3.42 76.71
0:99 [LYS] A:2710 [C] 3.18 76.71
0:102 [LYS] A:3222 [C] 4.3 53.66
0:102 [LYS] A:3223 [A] 4.65 A:3218 [A] 53.66
0:105 [ASN] A:3212 [C] 3.87 46.13
0:106 [ASN] A:3212 [C] 3.23 sugar:SC 82.52
0:106 [ASN] A:3213 [A] 4.02 A:3227 [U] 82.52
0:119 [LYS] A:3212 [C] 4.31 41.63
0:120 [HIS] A:3212 [C] 3.44 70.82
0:120 [HIS] A:3213 [A] 3.45 A:3227 [U] 70.82
0:134 [THR] A:2321 [A] 4.77 92.22
0:135 [ALA] A:2321 [A] 3.84 39.88
0:138 [ARG] A:2320 [A] 3.62 A:2323 [A] 72.52
0:138 [ARG] A:2321 [A] 3.17 72.52
0:139 [ARG] A:2321 [A] 3.3 40.83
0:139 [ARG] A:2322 [C] 2.87 40.83
0:141 [ILE] A:2321 [A] 4.15 69.62
0:142 [GLY] A:2321 [A] 3.33 0.3
0:145 [GLU] A:2321 [A] 3.9 base:SC 28.41
0:148 [PRO] A:2324 [U] 3.85 A:2319 [A] 22.97
0:148 [PRO] A:2325 [U] 3.87 A:2318 [A] 22.97
0:149 [PHE] A:2325 [U] 3.19 A:2318 [A] 27.67
0:149 [PHE] A:2326 [C] 3.61 A:2317 [G] 27.67

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group98 7OF0_0_A 0: 39s ribosomal protein l32, mitochondrial, Homo sapiens (natural) A: 16s ribosomal RNA, Homo sapiens (natural) Q9BYC8 Rubredoxin-related Bacterial large subunit ribosomal RNA ✔

Interologs

Total number of interologs for this interface: 3

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6S0Z_Z_A 7OF0_0_A 0.73 0.92 1.21 0.21 Rubredoxin-related Bacterial large subunit ribosomal RNA compare
4Y4O_15_1A 7OF0_0_A 0.74 0.93 1.15 0.14 Rubredoxin-related Bacterial large subunit ribosomal RNA compare
7OF0_0_A 7OF7_0_A 1.00 0.98 0.16 1.0 Rubredoxin-related Bacterial large subunit ribosomal RNA compare