group1 |
2 |
HUP domains &
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
|
tRNA
|
✘ |
group2 |
2 |
Microbial ribonucleases
|
|
✘ |
group3 |
2 |
Eukaryotic type KH-domain (KH-domain type I)
|
|
✔ |
group4 |
2 |
Prokaryotic type KH domain (KH-domain type II)
|
|
✔ |
group5 |
2 |
RNA bacteriophage capsid protein
|
|
✘ |
group6 |
2 |
|
|
✘ |
group7 |
2 |
P-loop containing nucleoside triphosphate hydrolases &
tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain
|
tRNA
|
✘ |
group8 |
2 |
Prokaryotic type KH domain (KH-domain type II)
|
|
✘ |
group9 |
2 |
Nucleic acid-binding proteins &
CCHC-type 1 zinc finger
|
|
✘ |
group10 |
2 |
CRISPR-associated protein Cas7/Csa2-related
|
|
✘ |
group11 |
2 |
|
|
✘ |
group12 |
2 |
tri-helical &
winged &
Helical bundle in ROQ domain
|
|
✘ |
group13 |
2 |
SH3
|
|
✘ |
group14 |
2 |
SH3
|
Bacterial small subunit ribosomal RNA
|
✔ |
group15 |
2 |
Ribosome binding protein Y (YfiA homologue)
|
Bacterial small subunit ribosomal RNA
|
✘ |
group16 |
2 |
Ribosomal protein L11, C-terminal domain &
Ribosomal protein L11/L12e N-terminal domain
|
Bacterial large subunit ribosomal RNA
|
✔ |
group17 |
2 |
Ribosomal protein L25-like
|
Bacterial large subunit ribosomal RNA
|
✔ |
group18 |
2 |
CCCH zinc finger
|
|
✘ |
group19 |
2 |
CCCH zinc finger
|
|
✘ |
group20 |
2 |
CCCH zinc finger
|
|
✘ |
group21 |
2 |
RPL13
|
Eukaryotic large subunit ribosomal RNA
|
✔ |
group22 |
2 |
Ribosomal protein L10e
|
5S ribosomal RNA
|
✔ |
group23 |
2 |
RplX-like
|
5S ribosomal RNA
|
✔ |
group24 |
2 |
Ribosomal protein L22e
|
|
✔ |
group25 |
2 |
Ribosomal protein L29 (L29p)
|
Eukaryotic large subunit ribosomal RNA
|
✔ |
group26 |
2 |
Rubredoxin-related
|
5.8S ribosomal RNA
|
✔ |
group27 |
2 |
30S ribosomal protein S21
|
Bacterial small subunit ribosomal RNA
|
✔ |
group28 |
2 |
Immunoglobulin/Fibronectin type III/E set domains/PapD-like
|
|
✘ |
group29 |
2 |
Obg GTP-binding protein N-terminal domain
|
Bacterial large subunit ribosomal RNA
|
✘ |
group30 |
2 |
|
|
✘ |
group31 |
2 |
Mitoribosomal protein mL52
|
Bacterial large subunit ribosomal RNA
|
✔ |
group32 |
3 |
Trp RNA-binding attenuation protein (TRAP)
|
|
✘ |
group33 |
3 |
dsRNA-binding domain-like
|
|
✘ |
group34 |
3 |
Eukaryotic type KH-domain (KH-domain type I)
|
|
✘ |
group35 |
3 |
Putative DNA-binding domain
|
Bacterial small signal recognition particle RNA
|
✘ |
group36 |
3 |
Ribosomal protein L11, C-terminal domain
|
Archaeal large subunit ribosomal RNA
|
✔ |
group37 |
3 |
winged
|
|
✘ |
group38 |
3 |
RNase III catalytic domain-like &
dsRNA-binding domain-like
|
|
✘ |
group39 |
3 |
Nucleolar RNA-binding protein Nop10-like
|
|
✔ |
group40 |
3 |
CRISPR transcript (pre-crRNA) processing endoribonuclease-related
|
|
✘ |
group41 |
3 |
PAP/OAS1 substrate-binding domain &
Nucleotidyltransferase
|
|
✘ |
group42 |
3 |
RplX-like
|
Eukaryotic large subunit ribosomal RNA
|
✔ |
group43 |
3 |
Ribosomal protein L28
|
Bacterial large subunit ribosomal RNA
|
✔ |
group44 |
3 |
L9 N-domain-like
|
Bacterial large subunit ribosomal RNA
|
✔ |
group45 |
3 |
Ribosomal protein L14-related
|
Bacterial small subunit ribosomal RNA
|
✔ |
group46 |
3 |
6-bladed
|
|
✘ |
group47 |
3 |
CRISPR-associated endonuclease Cpf1 first helical domain &
CRISPR-associated endonuclease Cpf1 second helical domain &
Small protein B (SmpB) &
Ribonuclease H-like
|
|
✘ |
group48 |
3 |
SH3
|
Eukaryotic large subunit ribosomal RNA
|
✔ |
group49 |
3 |
SH3
|
Eukaryotic large subunit ribosomal RNA
|
✔ |
group50 |
3 |
SH3
|
Eukaryotic large subunit ribosomal RNA
|
✔ |
group51 |
3 |
Alanine racemase-C
|
Eukaryotic large subunit ribosomal RNA
|
✔ |
group52 |
3 |
RPL34
|
Eukaryotic large subunit ribosomal RNA
|
✔ |
group53 |
3 |
60S ribosomal protein rpL36 (L36e)
|
Eukaryotic large subunit ribosomal RNA
|
✔ |
group54 |
3 |
Signal recognition particle alu RNA binding heterodimer SRP9/14-related
|
Eukaryotic large subunit ribosomal RNA
|
✔ |
group55 |
4 |
Rubredoxin-related
|
LSU clan
|
✔ |
group56 |
4 |
SH3
|
5S ribosomal RNA
|
✔ |
group57 |
4 |
Ribosomal protein L30p/L7e
|
5S ribosomal RNA
|
✔ |
group58 |
4 |
Ribosomal protein L32e
|
LSU clan
|
✔ |
group59 |
4 |
CRISPR transcript (pre-crRNA) processing endoribonuclease-related
|
|
✘ |
group60 |
4 |
S15/NS1 RNA-binding domain
|
|
✘ |
group61 |
4 |
SH3
|
Bacterial large subunit ribosomal RNA
|
✔ |
group62 |
4 |
SH3
|
Bacterial large subunit ribosomal RNA
|
✔ |
group63 |
4 |
Alpha-L RNA-binding motif
|
Bacterial small subunit ribosomal RNA
|
✔ |
group64 |
4 |
Ribosomal protein S16
|
Bacterial small subunit ribosomal RNA
|
✔ |
group65 |
4 |
Ribosomal protein L10e
|
5S ribosomal RNA
|
✔ |
group66 |
4 |
winged
|
|
✘ |
group67 |
4 |
Cytidine deaminase-like
|
|
✘ |
group68 |
4 |
Rubredoxin-related
|
Eukaryotic large subunit ribosomal RNA
|
✔ |
group69 |
5 |
Tombusvirus P19 core protein, VP19
|
|
✘ |
group70 |
5 |
Rubredoxin-related
|
Eukaryotic large subunit ribosomal RNA
|
✔ |
group71 |
5 |
Ribosomal proteins L15p and L18e
|
Eukaryotic large subunit ribosomal RNA
|
✔ |
group72 |
5 |
SH3
|
Eukaryotic large subunit ribosomal RNA
|
✔ |
group73 |
5 |
LIM domain-like
|
LSU clan
|
✔ |
group74 |
5 |
S-adenosyl-L-methionine-dependent methyltransferases
|
|
✘ |
group75 |
5 |
Ribosomal protein S20
|
Bacterial small subunit ribosomal RNA
|
✔ |
group76 |
5 |
CRISPR transcript (pre-crRNA) processing endoribonuclease-related
|
|
✘ |
group77 |
5 |
Ribosomal protein L10-like
|
Bacterial large subunit ribosomal RNA
|
✔ |
group78 |
5 |
Rubredoxin-related
|
Bacterial large subunit ribosomal RNA
|
✔ |
group79 |
5 |
50S ribosomal protein L34
|
Bacterial large subunit ribosomal RNA
|
✔ |
group80 |
5 |
Ribosomal protein L35p
|
Bacterial large subunit ribosomal RNA
|
✔ |
group81 |
5 |
Ribosomal protein L36
|
Bacterial large subunit ribosomal RNA
|
✔ |
group82 |
5 |
Ribosomal protein L20
|
Bacterial large subunit ribosomal RNA
|
✔ |
group83 |
5 |
Ribosomal protein L21p
|
Bacterial large subunit ribosomal RNA
|
✔ |
group84 |
5 |
Ribosomal protein S2/SIS domain
|
Bacterial small subunit ribosomal RNA
|
✔ |
group85 |
5 |
Ribosomal protein S6
|
Bacterial small subunit ribosomal RNA
|
✔ |
group86 |
5 |
Ribosomal protein S8, N-terminal domain &
Ribosomal protein S8, C-terminal domain
|
Bacterial small subunit ribosomal RNA
|
✔ |
group87 |
5 |
Ribosomal protein S10
|
Bacterial small subunit ribosomal RNA
|
✔ |
group88 |
5 |
Ribosomal protein S19
|
Bacterial small subunit ribosomal RNA
|
✔ |
group89 |
6 |
HUP domains &
Ribosomal protein L25-like &
Zn-binding domain in glutaminyl-tRNA synthetase
|
tRNA
|
✘ |
group90 |
6 |
PAP/OAS1 substrate-binding domain &
PAP/Archaeal CCA-adding enzyme, C-terminal domain &
Nucleotidyltransferase
|
|
✘ |
group91 |
6 |
SH3
|
LSU clan
|
✔ |
group92 |
6 |
Ribosomal protein S5 domain 2-like
|
Bacterial small subunit ribosomal RNA
|
✔ |
group93 |
6 |
Nucleic acid-binding proteins
|
Bacterial small subunit ribosomal RNA
|
✔ |
group94 |
6 |
tri-helical
|
Bacterial small subunit ribosomal RNA
|
✔ |
group95 |
6 |
ARM repeat
|
|
✘ |
group96 |
6 |
H2TH
|
Bacterial small subunit ribosomal RNA
|
✔ |
group97 |
6 |
Ribosomal protein L10e
|
tRNA
|
✔ |
group98 |
6 |
Rubredoxin-related
|
Bacterial large subunit ribosomal RNA
|
✔ |
group99 |
6 |
Prokaryotic ribosomal protein L17
|
Bacterial large subunit ribosomal RNA
|
✔ |
group100 |
6 |
Ribosomal protein S3-C &
Prokaryotic type KH domain (KH-domain type II)
|
Bacterial small subunit ribosomal RNA
|
✔ |