MSA-tools

Evolutionary rate analysis

Job name: 8PVU

Job id: d3e9b4bf-39ba-43ad-9d94-45084177bc77

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Element
Chain
Chainbow
Hydrophobicity
Electrostatics (surface only)
Occupancy (if given)

Conservation*

Show chains


*Conservation was calculated using Rate4Site

MSA used for conservation analysis

Select the MSA to visualise:

Sequence match log

Match found between MSA sequence 1 (occurrence 1/1) and protein chain E in structure with 100.0% identity
> MSA 1 (occurrence 1/1)
RYTNLSYIGEGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVATEYVATRWYRAPEIMLNYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFDDLPKEKLKELIFEETARFQP
> protein chain E in structure
RYTNLSYIGEGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVATEYVATRWYRAPEIMLNYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFDDLPKEKLKELIFEETARFQP

Match found between MSA sequence 2 (occurrence 1/1) and protein chain A in structure with 100.0% identity
> MSA 2 (occurrence 1/1)
TQVRGYDFNRGVNYRALLEAFGTTGFQATNFGRAVQQVNAMIEKKLEPLSQHADLTQSRRPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLGEFSLRGKELRENGINRIGNLLVPNENYCKFEDWLMPILDQMVMEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVFSPALTDGSLGDMIFFHSYKNPGLVLDIVEDLRLINTQAIFAKCTGMIILGGGVVKHHIANANLMRNGADYAVYINTAQEFDGSDSGARPDEAVSWGKIRVDAQPVKVYADASLVFPLLVAETFAQKMDAF
> protein chain A in structure
TQVRGYDFNRGVNYRALLEAFGTTGFQATNFGRAVQQVNAMIEKKLEPLSQHADLTQSRRPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLGEFSLRGKELRENGINRIGNLLVPNENYCKFEDWLMPILDQMVMEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVFSPALTDGSLGDMIFFHSYKNPGLVLDIVEDLRLINTQAIFAKCTGMIILGGGVVKHHIANANLMRNGADYAVYINTAQEFDGSDSGARPDEAVSWGKIRVDAQPVKVYADASLVFPLLVAETFAQKMDAF

Match found between MSA sequence 3 (occurrence 1/1) and protein chain B in structure with 100.0% identity
> MSA 3 (occurrence 1/1)
TQVRGYDFNRGVNYRALLEAFGTTGFQATNFGRAVQQVNAMIEKKLEPLPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLGEFSLRGKELRENGINRIGNLLVPNENYCKFEDWLMPILDQMVMEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVFSPALTDGSLGDMIFFHSYKNPGLVLDIVEDLRLINTQAIFAKCTGMIILGGGVVKHHIANANLMRNGADYAVYINTAQEFDGSDSRPDEAVSWGKIRVDAQPVKVYADASLVFPLLVAETFAQKMDAF
> protein chain B in structure
TQVRGYDFNRGVNYRALLEAFGTTGFQATNFGRAVQQVNAMIEKKLEPLPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLGEFSLRGKELRENGINRIGNLLVPNENYCKFEDWLMPILDQMVMEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVFSPALTDGSLGDMIFFHSYKNPGLVLDIVEDLRLINTQAIFAKCTGMIILGGGVVKHHIANANLMRNGADYAVYINTAQEFDGSDSRPDEAVSWGKIRVDAQPVKVYADASLVFPLLVAETFAQKMDAF

Match found between MSA sequence 4 (occurrence 1/1) and protein chain C in structure with 100.0% identity
> MSA 4 (occurrence 1/1)
TQVRGYDFNRGVNYRALLEAFGTTGFQATNFGRAVQQVNAMIEKKLPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLEFSLRGKELRENGINRIGNLLVPNENYCKFEDWLMPILDQMVMEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVFSPALTDGSLGDMIFFHSYKNPGLVLDIVEDLRLINTQAIFAKCTGMIILGGGVVKHHIANANLMRNGADYAVYINTAQEFDGSDSEAVSWGKIRVDAQPVKVYADASLVFPLLVAETFAQKM
> protein chain C in structure
TQVRGYDFNRGVNYRALLEAFGTTGFQATNFGRAVQQVNAMIEKKLPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLEFSLRGKELRENGINRIGNLLVPNENYCKFEDWLMPILDQMVMEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVFSPALTDGSLGDMIFFHSYKNPGLVLDIVEDLRLINTQAIFAKCTGMIILGGGVVKHHIANANLMRNGADYAVYINTAQEFDGSDSEAVSWGKIRVDAQPVKVYADASLVFPLLVAETFAQKM

Match found between MSA sequence 5 (occurrence 1/1) and protein chain D in structure with 100.0% identity
> MSA 5 (occurrence 1/1)
STQVRGYDFNRGVNYRALLEAFGTTGFQATNFGRAVQQVNAMIEKKLEPLRPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLNRIGNLLVPNENYCKFEDWLMPILDQMVMEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVFSPALTDGSLGDMIFFHSYKNPGLVLDIVEDLRLINTQAIFAKCTGMIILGGGVVKHHIANANLMRNGADYAVYINTAQEFDGGARPDEAVSWGKIRVDAQPVKVYADASLVFPLLVAETFAQKMDAF
> protein chain D in structure
STQVRGYDFNRGVNYRALLEAFGTTGFQATNFGRAVQQVNAMIEKKLEPLRPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLNRIGNLLVPNENYCKFEDWLMPILDQMVMEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVFSPALTDGSLGDMIFFHSYKNPGLVLDIVEDLRLINTQAIFAKCTGMIILGGGVVKHHIANANLMRNGADYAVYINTAQEFDGGARPDEAVSWGKIRVDAQPVKVYADASLVFPLLVAETFAQKMDAF

Job parameters

chain: all chains
coupled mode: false
field: bfactor
job_type: evolutionary-analysis
jobid: d3e9b4bf-39ba-43ad-9d94-45084177bc77
jobname: 8PVU
maximum  number sequences: 100
maximum percentage identity: 80
output:
- /store/plateformes/BIOI2/webservices/msa_tools/jobs/d3e9b4bf-39ba-43ad-9d94-45084177bc77/result/structure_output.cif
- /store/plateformes/BIOI2/webservices/msa_tools/jobs/d3e9b4bf-39ba-43ad-9d94-45084177bc77/8PVU.zip

[2024-10-18 14:24:27] Fetching sequence(s) from structure
[2024-10-18 14:24:28] Running mmseqs to generate MSA(s)
[2024-10-18 14:24:29] Loading database...
[2024-10-18 14:24:29] Running step 1 - colabfold_search msa generation...
[2024-10-18 14:29:30] ...output ok
[2024-10-18 14:29:30] ...renaming MSA output files
[2024-10-18 14:29:30] ...done!
[2024-10-18 14:29:31] Running conservation analysis with Rate4Site
Reformatted /store/plateformes/BIOI2/webservices/msa_tools/jobs/d3e9b4bf-39ba-43ad-9d94-45084177bc77/structure.a3m with 24764 sequences from a3m to fas and written to file temp/structure.fasta
[2024-10-18 14:29:34] - INFO - Fasta with multiple sequences
[2024-10-18 14:29:40] - INFO - Rate4site command :
[2024-10-18 14:29:40] - INFO - rate4site  -s /store/plateformes/BIOI2/webservices/msa_tools/jobs/d3e9b4bf-39ba-43ad-9d94-45084177bc77/result/split_1.fasta -o /store/plateformes/BIOI2/webservices/msa_tools/jobs/d3e9b4bf-39ba-43ad-9d94-45084177bc77/result/r4s_0.grade -x /store/plateformes/BIOI2/webservices/msa_tools/jobs/d3e9b4bf-39ba-43ad-9d94-45084177bc77/result/r4s_0.ph
START OF LOG FILE

 =======================================================
 the rate for site project:                             
 Version: 3.0.0.                                        
 Tal Pupko and his lab:     talp@post.tau.ac.il         
 Nir Ben-Tal and his lab:   bental@ashtoret.tau.ac.il   
 Itay Mayrose:  itayMay@post.tau.ac.il                  
 For program support, please contact Itay Mayrose       
 =======================================================


 ---------------------- THE PARAMETERS ----------------------------
seq file is: /store/plateformes/BIOI2/webservices/msa_tools/jobs/d3e9b4bf-39ba-43ad-9d94-45084177bc77/result/split_1.fasta
output file is: /store/plateformes/BIOI2/webservices/msa_tools/jobs/d3e9b4bf-39ba-43ad-9d94-45084177bc77/result/r4s_0.grade
rate inference method is: empirical Bayesian estimate
using a Gamma prior distribution with: 16 discrete categories
probablistic_model is: JTT
branch lengths optimization is ML using a gamma model

 -----------------------------------------------------------------
The tree was written to a file name called /store/plateformes/BIOI2/webservices/msa_tools/jobs/d3e9b4bf-39ba-43ad-9d94-45084177bc77/result/r4s_0.ph
[2024-10-18 14:32:24] - INFO - Rate4site command :
[2024-10-18 14:32:24] - INFO - rate4site  -s /store/plateformes/BIOI2/webservices/msa_tools/jobs/d3e9b4bf-39ba-43ad-9d94-45084177bc77/result/split_2.fasta -o /store/plateformes/BIOI2/webservices/msa_tools/jobs/d3e9b4bf-39ba-43ad-9d94-45084177bc77/result/r4s_1.grade -x /store/plateformes/BIOI2/webservices/msa_tools/jobs/d3e9b4bf-39ba-43ad-9d94-45084177bc77/result/r4s_1.ph
START OF LOG FILE

 =======================================================
 the rate for site project:                             
 Version: 3.0.0.                                        
 Tal Pupko and his lab:     talp@post.tau.ac.il         
 Nir Ben-Tal and his lab:   bental@ashtoret.tau.ac.il   
 Itay Mayrose:  itayMay@post.tau.ac.il                  
 For program support, please contact Itay Mayrose       
 =======================================================


 ---------------------- THE PARAMETERS ----------------------------
seq file is: /store/plateformes/BIOI2/webservices/msa_tools/jobs/d3e9b4bf-39ba-43ad-9d94-45084177bc77/result/split_2.fasta
output file is: /store/plateformes/BIOI2/webservices/msa_tools/jobs/d3e9b4bf-39ba-43ad-9d94-45084177bc77/result/r4s_1.grade
rate inference method is: empirical Bayesian estimate
using a Gamma prior distribution with: 16 discrete categories
probablistic_model is: JTT
branch lengths optimization is ML using a gamma model

 -----------------------------------------------------------------
The tree was written to a file name called /store/plateformes/BIOI2/webservices/msa_tools/jobs/d3e9b4bf-39ba-43ad-9d94-45084177bc77/result/r4s_1.ph
[2024-10-18 14:35:36] - INFO - Rate4site command :
[2024-10-18 14:35:36] - INFO - rate4site  -s /store/plateformes/BIOI2/webservices/msa_tools/jobs/d3e9b4bf-39ba-43ad-9d94-45084177bc77/result/split_3.fasta -o /store/plateformes/BIOI2/webservices/msa_tools/jobs/d3e9b4bf-39ba-43ad-9d94-45084177bc77/result/r4s_2.grade -x /store/plateformes/BIOI2/webservices/msa_tools/jobs/d3e9b4bf-39ba-43ad-9d94-45084177bc77/result/r4s_2.ph
START OF LOG FILE

 =======================================================
 the rate for site project:                             
 Version: 3.0.0.                                        
 Tal Pupko and his lab:     talp@post.tau.ac.il         
 Nir Ben-Tal and his lab:   bental@ashtoret.tau.ac.il   
 Itay Mayrose:  itayMay@post.tau.ac.il                  
 For program support, please contact Itay Mayrose       
 =======================================================


 ---------------------- THE PARAMETERS ----------------------------
seq file is: /store/plateformes/BIOI2/webservices/msa_tools/jobs/d3e9b4bf-39ba-43ad-9d94-45084177bc77/result/split_3.fasta
output file is: /store/plateformes/BIOI2/webservices/msa_tools/jobs/d3e9b4bf-39ba-43ad-9d94-45084177bc77/result/r4s_2.grade
rate inference method is: empirical Bayesian estimate
using a Gamma prior distribution with: 16 discrete categories
probablistic_model is: JTT
branch lengths optimization is ML using a gamma model

 -----------------------------------------------------------------
The tree was written to a file name called /store/plateformes/BIOI2/webservices/msa_tools/jobs/d3e9b4bf-39ba-43ad-9d94-45084177bc77/result/r4s_2.ph
[2024-10-18 14:38:40] - INFO - Rate4site command :
[2024-10-18 14:38:40] - INFO - rate4site  -s /store/plateformes/BIOI2/webservices/msa_tools/jobs/d3e9b4bf-39ba-43ad-9d94-45084177bc77/result/split_4.fasta -o /store/plateformes/BIOI2/webservices/msa_tools/jobs/d3e9b4bf-39ba-43ad-9d94-45084177bc77/result/r4s_3.grade -x /store/plateformes/BIOI2/webservices/msa_tools/jobs/d3e9b4bf-39ba-43ad-9d94-45084177bc77/result/r4s_3.ph
START OF LOG FILE

 =======================================================
 the rate for site project:                             
 Version: 3.0.0.                                        
 Tal Pupko and his lab:     talp@post.tau.ac.il         
 Nir Ben-Tal and his lab:   bental@ashtoret.tau.ac.il   
 Itay Mayrose:  itayMay@post.tau.ac.il                  
 For program support, please contact Itay Mayrose       
 =======================================================


 ---------------------- THE PARAMETERS ----------------------------
seq file is: /store/plateformes/BIOI2/webservices/msa_tools/jobs/d3e9b4bf-39ba-43ad-9d94-45084177bc77/result/split_4.fasta
output file is: /store/plateformes/BIOI2/webservices/msa_tools/jobs/d3e9b4bf-39ba-43ad-9d94-45084177bc77/result/r4s_3.grade
rate inference method is: empirical Bayesian estimate
using a Gamma prior distribution with: 16 discrete categories
probablistic_model is: JTT
branch lengths optimization is ML using a gamma model

 -----------------------------------------------------------------
The tree was written to a file name called /store/plateformes/BIOI2/webservices/msa_tools/jobs/d3e9b4bf-39ba-43ad-9d94-45084177bc77/result/r4s_3.ph
[2024-10-18 14:40:43] - INFO - Rate4site command :
[2024-10-18 14:40:43] - INFO - rate4site  -s /store/plateformes/BIOI2/webservices/msa_tools/jobs/d3e9b4bf-39ba-43ad-9d94-45084177bc77/result/split_5.fasta -o /store/plateformes/BIOI2/webservices/msa_tools/jobs/d3e9b4bf-39ba-43ad-9d94-45084177bc77/result/r4s_4.grade -x /store/plateformes/BIOI2/webservices/msa_tools/jobs/d3e9b4bf-39ba-43ad-9d94-45084177bc77/result/r4s_4.ph
START OF LOG FILE

 =======================================================
 the rate for site project:                             
 Version: 3.0.0.                                        
 Tal Pupko and his lab:     talp@post.tau.ac.il         
 Nir Ben-Tal and his lab:   bental@ashtoret.tau.ac.il   
 Itay Mayrose:  itayMay@post.tau.ac.il                  
 For program support, please contact Itay Mayrose       
 =======================================================


 ---------------------- THE PARAMETERS ----------------------------
seq file is: /store/plateformes/BIOI2/webservices/msa_tools/jobs/d3e9b4bf-39ba-43ad-9d94-45084177bc77/result/split_5.fasta
output file is: /store/plateformes/BIOI2/webservices/msa_tools/jobs/d3e9b4bf-39ba-43ad-9d94-45084177bc77/result/r4s_4.grade
rate inference method is: empirical Bayesian estimate
using a Gamma prior distribution with: 16 discrete categories
probablistic_model is: JTT
branch lengths optimization is ML using a gamma model

 -----------------------------------------------------------------
The tree was written to a file name called /store/plateformes/BIOI2/webservices/msa_tools/jobs/d3e9b4bf-39ba-43ad-9d94-45084177bc77/result/r4s_4.ph
[2024-10-18 14:43:33] - INFO - Match found between MSA sequence 1 (occurrence 1/1) and protein chain E in structure with 100.0% identity
[2024-10-18 14:43:33] - INFO - > MSA 1 (occurrence 1/1)
[2024-10-18 14:43:33] - INFO - RYTNLSYIGEGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVATEYVATRWYRAPEIMLNYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFDDLPKEKLKELIFEETARFQP
[2024-10-18 14:43:33] - INFO - > protein chain E in structure
[2024-10-18 14:43:33] - INFO - RYTNLSYIGEGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVATEYVATRWYRAPEIMLNYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFDDLPKEKLKELIFEETARFQP
[2024-10-18 14:43:33] - INFO - Match found between MSA sequence 2 (occurrence 1/1) and protein chain A in structure with 100.0% identity
[2024-10-18 14:43:33] - INFO - > MSA 2 (occurrence 1/1)
[2024-10-18 14:43:33] - INFO - TQVRGYDFNRGVNYRALLEAFGTTGFQATNFGRAVQQVNAMIEKKLEPLSQHADLTQSRRPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLGEFSLRGKELRENGINRIGNLLVPNENYCKFEDWLMPILDQMVMEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVFSPALTDGSLGDMIFFHSYKNPGLVLDIVEDLRLINTQAIFAKCTGMIILGGGVVKHHIANANLMRNGADYAVYINTAQEFDGSDSGARPDEAVSWGKIRVDAQPVKVYADASLVFPLLVAETFAQKMDAF
[2024-10-18 14:43:33] - INFO - > protein chain A in structure
[2024-10-18 14:43:33] - INFO - TQVRGYDFNRGVNYRALLEAFGTTGFQATNFGRAVQQVNAMIEKKLEPLSQHADLTQSRRPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLGEFSLRGKELRENGINRIGNLLVPNENYCKFEDWLMPILDQMVMEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVFSPALTDGSLGDMIFFHSYKNPGLVLDIVEDLRLINTQAIFAKCTGMIILGGGVVKHHIANANLMRNGADYAVYINTAQEFDGSDSGARPDEAVSWGKIRVDAQPVKVYADASLVFPLLVAETFAQKMDAF
[2024-10-18 14:43:33] - INFO - Match found between MSA sequence 3 (occurrence 1/1) and protein chain B in structure with 100.0% identity
[2024-10-18 14:43:33] - INFO - > MSA 3 (occurrence 1/1)
[2024-10-18 14:43:33] - INFO - TQVRGYDFNRGVNYRALLEAFGTTGFQATNFGRAVQQVNAMIEKKLEPLPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLGEFSLRGKELRENGINRIGNLLVPNENYCKFEDWLMPILDQMVMEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVFSPALTDGSLGDMIFFHSYKNPGLVLDIVEDLRLINTQAIFAKCTGMIILGGGVVKHHIANANLMRNGADYAVYINTAQEFDGSDSRPDEAVSWGKIRVDAQPVKVYADASLVFPLLVAETFAQKMDAF
[2024-10-18 14:43:33] - INFO - > protein chain B in structure
[2024-10-18 14:43:33] - INFO - TQVRGYDFNRGVNYRALLEAFGTTGFQATNFGRAVQQVNAMIEKKLEPLPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLGEFSLRGKELRENGINRIGNLLVPNENYCKFEDWLMPILDQMVMEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVFSPALTDGSLGDMIFFHSYKNPGLVLDIVEDLRLINTQAIFAKCTGMIILGGGVVKHHIANANLMRNGADYAVYINTAQEFDGSDSRPDEAVSWGKIRVDAQPVKVYADASLVFPLLVAETFAQKMDAF
[2024-10-18 14:43:33] - INFO - Match found between MSA sequence 4 (occurrence 1/1) and protein chain C in structure with 100.0% identity
[2024-10-18 14:43:33] - INFO - > MSA 4 (occurrence 1/1)
[2024-10-18 14:43:33] - INFO - TQVRGYDFNRGVNYRALLEAFGTTGFQATNFGRAVQQVNAMIEKKLPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLEFSLRGKELRENGINRIGNLLVPNENYCKFEDWLMPILDQMVMEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVFSPALTDGSLGDMIFFHSYKNPGLVLDIVEDLRLINTQAIFAKCTGMIILGGGVVKHHIANANLMRNGADYAVYINTAQEFDGSDSEAVSWGKIRVDAQPVKVYADASLVFPLLVAETFAQKM
[2024-10-18 14:43:33] - INFO - > protein chain C in structure
[2024-10-18 14:43:33] - INFO - TQVRGYDFNRGVNYRALLEAFGTTGFQATNFGRAVQQVNAMIEKKLPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLEFSLRGKELRENGINRIGNLLVPNENYCKFEDWLMPILDQMVMEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVFSPALTDGSLGDMIFFHSYKNPGLVLDIVEDLRLINTQAIFAKCTGMIILGGGVVKHHIANANLMRNGADYAVYINTAQEFDGSDSEAVSWGKIRVDAQPVKVYADASLVFPLLVAETFAQKM
[2024-10-18 14:43:33] - INFO - Match found between MSA sequence 5 (occurrence 1/1) and protein chain D in structure with 100.0% identity
[2024-10-18 14:43:33] - INFO - > MSA 5 (occurrence 1/1)
[2024-10-18 14:43:33] - INFO - STQVRGYDFNRGVNYRALLEAFGTTGFQATNFGRAVQQVNAMIEKKLEPLRPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLNRIGNLLVPNENYCKFEDWLMPILDQMVMEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVFSPALTDGSLGDMIFFHSYKNPGLVLDIVEDLRLINTQAIFAKCTGMIILGGGVVKHHIANANLMRNGADYAVYINTAQEFDGGARPDEAVSWGKIRVDAQPVKVYADASLVFPLLVAETFAQKMDAF
[2024-10-18 14:43:33] - INFO - > protein chain D in structure
[2024-10-18 14:43:33] - INFO - STQVRGYDFNRGVNYRALLEAFGTTGFQATNFGRAVQQVNAMIEKKLEPLRPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLNRIGNLLVPNENYCKFEDWLMPILDQMVMEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVFSPALTDGSLGDMIFFHSYKNPGLVLDIVEDLRLINTQAIFAKCTGMIILGGGVVKHHIANANLMRNGADYAVYINTAQEFDGGARPDEAVSWGKIRVDAQPVKVYADASLVFPLLVAETFAQKMDAF
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