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All interfaces > All interologs > Interface groups > group124 > 4Y4O_13_1A vs 7OF0_Z_A

Interface analysis


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Common contacts -

4Y4O_13
4Y4O_1A
7OF0_Z
7OF0_A
Conserved?
13:13 [ILE] 1A:1014 [U] Z:76 [ARG] A:2121 [G] ✔
13:13 [ILE] 1A:1015 [C] Z:76 [ARG] A:2122 [A] ✔
13:13 [ILE] 1A:1034 [A] Z:76 [ARG] A:2139 [U] ✔
13:13 [ILE] 1A:1035 [G] Z:76 [ARG] A:2140 [G] ✔
13:10 [LYS] 1A:1033 [G] Z:73 [LYS] A:2138 [U] ✔
13:10 [LYS] 1A:1034 [A] Z:73 [LYS] A:2139 [U] ✔
13:11 [SER] 1A:1034 [A] Z:74 [SER] A:2139 [U] ✔
13:11 [SER] 1A:1035 [G] Z:74 [SER] A:2140 [G] ✔
13:31 [LEU] 1A:1035 [G] Z:94 [ALA] A:2140 [G] ✔
13:31 [LEU] 1A:1203 [G] Z:94 [ALA] A:2252 [C] ✔
13:31 [LEU] 1A:1204 [C] Z:94 [ALA] A:2253 [U] ✔
13:25 [ALA] 1A:896 [A] Z:88 [MET] A:2057 [C] ✔
13:25 [ALA] 1A:897 [C] Z:88 [MET] A:2058 [C] ✔
13:25 [ALA] 1A:974 [G] Z:88 [MET] A:2082 [G] ✔
13:43 [ILE] 1A:973 [G] Z:106 [VAL] A:2081 [U] ✔
13:16 [PRO] 1A:1013 [G] Z:79 [PRO] A:2120 [G] ✔
13:16 [PRO] 1A:1014 [U] Z:79 [PRO] A:2121 [G] ✔
13:17 [LYS] 1A:1013 [G] Z:80 [TYR] A:2120 [G] ✔
13:17 [LYS] 1A:1014 [U] Z:80 [TYR] A:2121 [G] ✔
13:40 [THR] 1A:973 [G] Z:103 [ILE] A:2081 [U] ✔
13:15 [TYR] 1A:1014 [U] Z:78 [ARG] A:2121 [G] ✔
13:15 [TYR] 1A:1015 [C] Z:78 [ARG] A:2122 [A] ✔
13:9 [VAL] 1A:1034 [A] Z:72 [ILE] A:2139 [U] ✔
13:46 [ASN] 1A:897 [C] Z:109 [LYS] A:2058 [C] ✔
13:46 [ASN] 1A:973 [G] Z:109 [LYS] A:2081 [U] ✔
13:42 [ALA] 1A:972 [A] Z:105 [SER] A:2080 [U] ✔
13:42 [ALA] 1A:973 [G] Z:105 [SER] A:2081 [U] ✔
13:32 [GLN] 1A:1204 [C] Z:95 [HIS] A:2253 [U] ✔
13:20 [LYS] 1A:1014 [U] Z:83 [LYS] A:2121 [G] ✔
13:20 [LYS] 1A:1015 [C] Z:83 [LYS] A:2122 [A] ✔
13:30 [ARG] 1A:1204 [C] Z:93 [LYS] A:2253 [U] ✔
13:30 [ARG] 1A:1205 [U] Z:93 [LYS] A:2254 [C] ✔
13:12 [PRO] 1A:1015 [C] Z:75 [THR] A:2122 [A] ✔
13:12 [PRO] 1A:1035 [G] Z:75 [THR] A:2140 [G] ✔
13:22 [ALA] 1A:897 [C] Z:85 [ILE] A:2058 [C] ✔
13:14 [GLY] 1A:1014 [U] Z:77 [ARG] A:2121 [G] ✔
13:14 [GLY] 1A:1015 [C] Z:77 [ARG] A:2122 [A] ✔
13:31 [LEU] 1A:1034 [A] Z:94 [ALA] A:2139 [U] ❌ 7OF0_Z_A
13:18 [ASP] 1A:897 [C] Z:81 [TRP] A:2058 [C] ❌ 7OF0_Z_A
13:18 [ASP] 1A:898 [U] Z:81 [TRP] A:2059 [C] ❌ 7OF0_Z_A
13:45 [GLY] 1A:898 [U] Z:108 [ALA] A:2059 [C] ❌ 7OF0_Z_A
13:25 [ALA] 1A:973 [G] Z:88 [MET] A:2081 [U] ❌ 7OF0_Z_A
13:43 [ILE] 1A:898 [U] Z:106 [VAL] A:2059 [C] ❌ 7OF0_Z_A
13:15 [TYR] 1A:1033 [G] Z:78 [ARG] A:2138 [U] ❌ 7OF0_Z_A
13:46 [ASN] 1A:898 [U] Z:109 [LYS] A:2059 [C] ❌ 7OF0_Z_A
13:42 [ALA] 1A:898 [U] Z:105 [SER] A:2059 [C] ❌ 7OF0_Z_A
13:41 [PRO] 1A:898 [U] Z:104 [PRO] A:2059 [C] ❌ 7OF0_Z_A
13:43 [ILE] 1A:974 [G] Z:106 [VAL] A:2082 [G] ❌ 4Y4O_13_1A
13:46 [ASN] 1A:974 [G] Z:109 [LYS] A:2082 [G] ❌ 4Y4O_13_1A
13:10 [LYS] 1A:1035 [G] Z:73 [LYS] A:2140 [G] ❌ 4Y4O_13_1A
13:11 [SER] 1A:1033 [G] Z:74 [SER] A:2138 [U] ❌ 4Y4O_13_1A
13:14 [GLY] 1A:1034 [A] Z:77 [ARG] A:2139 [U] ❌ 4Y4O_13_1A
13:14 [GLY] 1A:1033 [G] Z:77 [ARG] A:2138 [U] ❌ 4Y4O_13_1A
13:18 [ASP] 1A:1013 [G] Z:81 [TRP] A:2120 [G] ❌ 4Y4O_13_1A
13:29 [ARG] 1A:1035 [G] Z:92 [GLU] A:2140 [G] ❌ 4Y4O_13_1A
13:32 [GLN] 1A:1203 [G] Z:95 [HIS] A:2252 [C] ❌ 4Y4O_13_1A
13:24 [LYS] 1A:895 [G] Z:87 [LYS] A:2056 [G] ❌ 7OF0_Z:87, 7OF0_A:2056 no longer at interface
13:24 [LYS] 1A:976 [G] Z:87 [LYS] A:2084 [A] ❌ 7OF0_Z:87, 7OF0_A:2084 no longer at interface
13:24 [LYS] 1A:978 [A] Z:87 [LYS] A:2085 [A] ❌ 7OF0_Z:87, 7OF0_A:2085 no longer at interface
13:29 [ARG] 1A:976 [G] Z:92 [GLU] A:2084 [A] ❌ 7OF0_A:2084 no longer at interface
13:37 [LEU] 1A:975 [U] Z:100 [HIS] A:2083 [U] ❌ 4Y4O_13:37, 4Y4O_1A:975 no longer at interface
13:41 [PRO] 1A:900 [G] Z:104 [PRO] A:2060 [A] ❌ 4Y4O_1A:900 no longer at interface
13:42 [ALA] 1A:900 [G] Z:105 [SER] A:2060 [A] ❌ 4Y4O_1A:900 no longer at interface
13:45 [GLY] 1A:900 [G] Z:108 [ALA] A:2060 [A] ❌ 4Y4O_1A:900 no longer at interface
13:10 [LYS] 1A:1032 [C] Z:73 [LYS] A:2137 [C] ❌ 4Y4O_1A:1032 no longer at interface
13:13 [ILE] 1A:1021 [G] Z:76 [ARG] A:2126 [U] ❌ 4Y4O_1A:1021 no longer at interface
13:13 [ILE] 1A:1016 [C] Z:76 [ARG] A:2123 [C] ❌ 4Y4O_1A:1016 no longer at interface
13:14 [GLY] 1A:1031 [C] Z:77 [ARG] A:2136 [C] ❌ 4Y4O_1A:1031 no longer at interface
13:14 [GLY] 1A:1032 [C] Z:77 [ARG] A:2137 [C] ❌ 4Y4O_1A:1032 no longer at interface
13:14 [GLY] 1A:1022 [C] Z:77 [ARG] A:2127 [A] ❌ 4Y4O_1A:1022 no longer at interface
13:25 [ALA] 1A:975 [U] Z:88 [MET] A:2083 [U] ❌ 4Y4O_1A:975 no longer at interface
13:30 [ARG] 1A:1036 [A] Z:93 [LYS] A:2141 [U] ❌ 4Y4O_1A:1036 no longer at interface
13:24 [LYS] 1A:896 [A] Z:87 [LYS] A:2057 [C] ❌ 7OF0_Z:87 no longer at interface
13:24 [LYS] 1A:974 [G] Z:87 [LYS] A:2082 [G] ❌ 7OF0_Z:87 no longer at interface
13:21 [ALA] 1A:896 [A] Z:84 [ASP] A:2057 [C] ❌ 7OF0_Z:84 no longer at interface
13:21 [ALA] 1A:897 [C] Z:84 [ASP] A:2058 [C] ❌ 7OF0_Z:84 no longer at interface
13:49 [LYS] 1A:897 [C] Z:112 [VAL] A:2058 [C] ❌ 7OF0_Z:112 no longer at interface
13:49 [LYS] 1A:898 [U] Z:112 [VAL] A:2059 [C] ❌ 7OF0_Z:112 no longer at interface
13:37 [LEU] 1A:974 [G] Z:100 [HIS] A:2082 [G] ❌ 4Y4O_13:37 no longer at interface
13:38 [GLU] 1A:973 [G] Z:101 [LYS] A:2081 [U] ❌ 4Y4O_13:38 no longer at interface
13:38 [GLU] 1A:974 [G] Z:101 [LYS] A:2082 [G] ❌ 4Y4O_13:38 no longer at interface
13:8 [LEU] 1A:1035 [G] Z:71 [ARG] A:2140 [G] ❌ 4Y4O_13:8 no longer at interface
13:8 [LEU] 1A:1034 [A] Z:71 [ARG] A:2139 [U] ❌ 4Y4O_13:8 no longer at interface
13:26 [LEU] 1A:974 [G] Z:89 [LEU] A:2082 [G] ❌ 4Y4O_13:26 no longer at interface
13:33 [GLN] 1A:1205 [U] Z:96 [THR] A:2254 [C] ❌ 4Y4O_13:33 no longer at interface
13:33 [GLN] 1A:1204 [C] Z:96 [THR] A:2253 [U] ❌ 4Y4O_13:33 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L30p/L7e Bacterial large subunit ribosomal RNA 0.93 1.37 0.18 0.91 0.97 0.88 0.68 0.49 0.42 0.30 0.61


Other pairs involving 4Y4O_13_1A or 7OF0_Z_A

Total number of entries: 10

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1YHQ_W_0 4Y4O_13_1A 0.75 0.9 2.44 0.15 Ribosomal protein L30p/L7e compare
1VQ8_W_0 4Y4O_13_1A 0.76 0.9 2.49 0.15 Ribosomal protein L30p/L7e compare
7OF0_Z_A 7RYG_Y_A 0.37 0.89 3.29 0.15 Ribosomal protein L30p/L7e Bacterial large subunit ribosomal RNA compare
4Y4O_13_1A 6S0Z_X_A 0.79 0.97 1.8 0.38 Ribosomal protein L30p/L7e Bacterial large subunit ribosomal RNA compare
4Y4O_13_1A 7OF0_Z_A 0.49 0.93 1.37 0.18 Ribosomal protein L30p/L7e Bacterial large subunit ribosomal RNA compare
4Y4O_13_1A 7O7Y_BF_B5 0.58 0.89 2.87 0.04 Ribosomal protein L30p/L7e compare
4Y4O_13_1A 6AZ3_c_1 0.51 0.65 3.35 0.08 Ribosomal protein L30p/L7e compare
4Y4O_13_1A 7RYG_Y_A 0.66 0.96 3.31 0.31 Ribosomal protein L30p/L7e Bacterial large subunit ribosomal RNA compare
4Y4O_13_1A 7K00_y_a 0.76 0.96 1.81 0.29 Ribosomal protein L30p/L7e Bacterial large subunit ribosomal RNA compare
6S0Z_X_A 7OF0_Z_A 0.62 0.93 2.4 0.18 Ribosomal protein L30p/L7e Bacterial large subunit ribosomal RNA compare