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All interfaces > All interologs > Interface groups > group139 > 5XTM_A_B vs 7O7Y_Al_A2

Interface analysis


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Common contacts -

5XTM_A
5XTM_B
7O7Y_Al
7O7Y_A2
Conserved?
A:39 [GLU] B:20 [G] Al:37 [GLU] A2:1287 [G] ✔
A:35 [LYS] B:18 [G] Al:33 [ARG] A2:1285 [A] ✔
A:35 [LYS] B:20 [G] Al:33 [ARG] A2:1287 [G] ✔
A:35 [LYS] B:32 [A] Al:33 [ARG] A2:1314 [A] ✔
A:99 [SER] B:19 [U] Al:108 [CYS] A2:1286 [G] ✔
A:60 [PRO] B:19 [U] Al:58 [GLU] A2:1286 [G] ✔
A:59 [ASP] B:19 [U] Al:57 [ASP] A2:1286 [G] ✔
A:58 [VAL] B:19 [U] Al:56 [CYS] A2:1286 [G] ✔
A:97 [ALA] B:18 [G] Al:106 [CYS] A2:1285 [A] ✔
A:97 [ALA] B:19 [U] Al:106 [CYS] A2:1286 [G] ✔
A:98 [ALA] B:18 [G] Al:107 [SER] A2:1285 [A] ✔
A:98 [ALA] B:19 [U] Al:107 [SER] A2:1286 [G] ✔
A:96 [ALA] B:18 [G] Al:105 [GLY] A2:1285 [A] ✔
A:96 [ALA] B:19 [U] Al:105 [GLY] A2:1286 [G] ✔
A:84 [LYS] B:19 [U] Al:82 [ASN] A2:1286 [G] ✔
A:36 [GLY] B:18 [G] Al:34 [GLY] A2:1285 [A] ✔
A:36 [GLY] B:19 [U] Al:34 [GLY] A2:1286 [G] ✔
A:36 [GLY] B:20 [G] Al:34 [GLY] A2:1287 [G] ✔
A:95 [VAL] B:17 [G] Al:104 [VAL] A2:1284 [C] ✔
A:95 [VAL] B:18 [G] Al:104 [VAL] A2:1285 [A] ✔
A:42 [LYS] B:29 [C] Al:40 [LYS] A2:1311 [U] ✔
A:42 [LYS] B:30 [C] Al:40 [LYS] A2:1312 [C] ✔
A:42 [LYS] B:31 [G] Al:40 [LYS] A2:1313 [G] ✔
A:38 [ASN] B:20 [G] Al:36 [ARG] A2:1287 [G] ✔
A:38 [ASN] B:31 [G] Al:36 [ARG] A2:1313 [G] ✔
A:93 [ILE] B:18 [G] Al:91 [LEU] A2:1285 [A] ✔
A:57 [ASP] B:19 [U] Al:55 [ASN] A2:1286 [G] ✔
A:37 [THR] B:18 [G] Al:35 [ILE] A2:1285 [A] ✔
A:37 [THR] B:19 [U] Al:35 [ILE] A2:1286 [G] ✔
A:37 [THR] B:20 [G] Al:35 [ILE] A2:1287 [G] ✔
A:63 [ILE] B:19 [U] Al:61 [TYR] A2:1286 [G] ✔
A:39 [GLU] B:18 [G] Al:37 [GLU] A2:1285 [A] ❌ 7O7Y_Al_A2
A:39 [GLU] B:31 [G] Al:37 [GLU] A2:1313 [G] ❌ 7O7Y_Al_A2
A:35 [LYS] B:31 [G] Al:33 [ARG] A2:1313 [G] ❌ 7O7Y_Al_A2
A:99 [SER] B:18 [G] Al:108 [CYS] A2:1285 [A] ❌ 5XTM_A_B
A:38 [ASN] B:29 [C] Al:36 [ARG] A2:1311 [U] ❌ 5XTM_A_B
A:94 [GLU] B:33 [G] Al:92 [CYS] A2:1316 [U] ❌ 7O7Y_Al:92, 7O7Y_A2:1316 no longer at interface
A:94 [GLU] B:17 [G] Al:92 [CYS] A2:1284 [C] ❌ 7O7Y_Al:92 no longer at interface
A:40 [THR] B:20 [G] Al:38 [ALA] A2:1287 [G] ❌ 7O7Y_Al:38 no longer at interface
A:34 [ARG] B:31 [G] Al:32 [ALA] A2:1313 [G] ❌ 7O7Y_Al:32 no longer at interface
A:46 [ARG] B:29 [C] Al:44 [LYS] A2:1311 [U] ❌ 7O7Y_Al:44 no longer at interface
A:46 [ARG] B:30 [C] Al:44 [LYS] A2:1312 [C] ❌ 7O7Y_Al:44 no longer at interface
A:92 [GLY] B:18 [G] Al:90 [GLY] A2:1285 [A] ❌ 5XTM_A:92 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
L30e-like 0.73 1.67 0.24 0.75 0.28 0.86 0.89 0.77 0.70 0.39 0.58


Other pairs involving 5XTM_A_B or 7O7Y_Al_A2

Total number of entries: 18

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6Q8U_C_A,B 7O7Y_Al_A2 0.87 0.66 1.35 0.22 L30e-like compare
5XTM_A_B 6AZ3_d_3 0.80 0.58 1.46 0.17 L30e-like compare
5XTM_A_B 6Q8U_C_A,B 0.95 0.79 0.59 0.22 L30e-like compare
5XTM_A_B 7O7Y_Al_A2 0.77 0.73 1.67 0.24 L30e-like compare
5XTM_A_B 6AZ3_G_1,7 0.91 0.7 1.59 0.27 L30e-like compare
5XTM_A_B 7O7Y_BG_B5,B8 0.68 0.71 1.4 0.22 L30e-like compare
5XTM_A_B 7O7Y_Bc_B5 0.79 0.62 1.62 0.14 L30e-like compare
5XTM_A_B 7OZQ_A_H 1.00 0.85 0.21 0.38 L30e-like compare
4BW0_B_A 5XTM_A_B 0.94 0.87 0.57 0.22 L30e-like compare
4BW0_B_A 7O7Y_Al_A2 0.85 0.75 1.35 0.22 L30e-like compare
3LWR_C_D 7O7Y_Al_A2 0.88 0.6 1.41 0.2 L30e-like compare
3LWR_C_D 5XTM_A_B 0.83 0.76 0.5 0.22 L30e-like compare
3HAX_D_E 7O7Y_Al_A2 0.97 0.6 1.46 0.24 L30e-like compare
2HVY_D_E 5XTM_A_B 0.92 0.78 0.22 0.22 L30e-like compare
2HVY_D_E 7O7Y_Al_A2 0.99 0.6 1.49 0.25 L30e-like compare
1YHQ_F_0 5XTM_A_B 0.93 0.78 0.72 0.22 L30e-like compare
1VQ8_F_0 5XTM_A_B 0.75 0.75 1.28 0.33 L30e-like compare
1JJ2_F_0 5XTM_A_B 0.94 0.78 0.56 0.22 L30e-like compare