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All interfaces > All interologs > Interface groups > group101 > 4Y4O_1e_1a vs 7O7Y_Ab_A2

Interface analysis


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Licorice
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Common contacts -

4Y4O_1e
4Y4O_1a
7O7Y_Ab
7O7Y_A2
Conserved?
1e:92 [LYS] 1a:7 [G] Ab:196 [ILE] A2:2 [A] ✔
1e:27 [ARG] 1a:1071 [C] Ab:123 [ARG] A2:1349 [G] ✔
1e:27 [ARG] 1a:1081 [G] Ab:123 [ARG] A2:1359 [U] ✔
1e:84 [PHE] 1a:1078 [U] Ab:188 [CYS] A2:1356 [C] ✔
1e:24 [ARG] 1a:15 [G] Ab:120 [GLN] A2:10 [G] ✔
1e:24 [ARG] 1a:1397 [C] Ab:120 [GLN] A2:1699 [C] ✔
1e:98 [THR] 1a:6 [G] Ab:202 [THR] A2:1 [U] ✔
1e:85 [GLY] 1a:864 [A] Ab:189 [GLY] A2:1144 [A] ✔
1e:19 [MET] 1a:15 [G] Ab:115 [GLN] A2:10 [G] ✔
1e:19 [MET] 1a:921 [U] Ab:115 [GLN] A2:1203 [U] ✔
1e:19 [MET] 1a:922 [G] Ab:115 [GLN] A2:1204 [G] ✔
1e:19 [MET] 1a:1396 [A] Ab:115 [GLN] A2:1698 [A] ✔
1e:19 [MET] 1a:1398 [A] Ab:115 [GLN] A2:1700 [A] ✔
1e:14 [ARG] 1a:17 [U] Ab:110 [MET] A2:12 [U] ✔
1e:14 [ARG] 1a:18 [C] Ab:110 [MET] A2:13 [C] ✔
1e:21 [ALA] 1a:922 [G] Ab:117 [ARG] A2:1204 [G] ✔
1e:21 [ALA] 1a:923 [A] Ab:117 [ARG] A2:1205 [A] ✔
1e:21 [ALA] 1a:1398 [A] Ab:117 [ARG] A2:1700 [A] ✔
1e:127 [ASN] 1a:18 [C] Ab:232 [THR] A2:13 [C] ✔
1e:127 [ASN] 1a:19 [C] Ab:232 [THR] A2:14 [C] ✔
1e:17 [ALA] 1a:15 [G] Ab:113 [GLN] A2:10 [G] ✔
1e:17 [ALA] 1a:16 [A] Ab:113 [GLN] A2:11 [A] ✔
1e:17 [ALA] 1a:1080 [A] Ab:113 [GLN] A2:1358 [A] ✔
1e:17 [ALA] 1a:1081 [G] Ab:113 [GLN] A2:1359 [U] ✔
1e:124 [GLY] 1a:20 [U] Ab:228 [GLY] A2:15 [U] ✔
1e:102 [ALA] 1a:8 [A] Ab:206 [SER] A2:3 [C] ✔
1e:101 [ILE] 1a:7 [G] Ab:205 [VAL] A2:2 [A] ✔
1e:101 [ILE] 1a:8 [A] Ab:205 [VAL] A2:3 [C] ✔
1e:120 [THR] 1a:7 [G] Ab:224 [THR] A2:2 [A] ✔
1e:120 [THR] 1a:8 [A] Ab:224 [THR] A2:3 [C] ✔
1e:126 [ARG] 1a:9 [G] Ab:230 [THR] A2:4 [C] ✔
1e:126 [ARG] 1a:10 [A] Ab:230 [THR] A2:5 [U] ✔
1e:133 [TYR] 1a:1078 [U] Ab:238 [LYS] A2:1356 [C] ✔
1e:133 [TYR] 1a:1079 [G] Ab:238 [LYS] A2:1357 [G] ✔
1e:121 [LYS] 1a:7 [G] Ab:225 [SER] A2:2 [A] ✔
1e:121 [LYS] 1a:8 [A] Ab:225 [SER] A2:3 [C] ✔
1e:121 [LYS] 1a:9 [G] Ab:225 [SER] A2:4 [C] ✔
1e:119 [LEU] 1a:6 [G] Ab:223 [TYR] A2:1 [U] ✔
1e:119 [LEU] 1a:7 [G] Ab:223 [TYR] A2:2 [A] ✔
1e:18 [ARG] 1a:15 [G] Ab:114 [LYS] A2:10 [G] ✔
1e:18 [ARG] 1a:921 [U] Ab:114 [LYS] A2:1203 [U] ✔
1e:18 [ARG] 1a:1070 [U] Ab:114 [LYS] A2:1348 [PSU] ✔
1e:18 [ARG] 1a:1081 [G] Ab:114 [LYS] A2:1359 [U] ✔
1e:20 [GLN] 1a:921 [U] Ab:116 [THR] A2:1203 [U] ✔
1e:20 [GLN] 1a:922 [G] Ab:116 [THR] A2:1204 [G] ✔
1e:20 [GLN] 1a:1398 [A] Ab:116 [THR] A2:1700 [A] ✔
1e:86 [ALA] 1a:19 [C] Ab:190 [SER] A2:14 [C] ✔
1e:86 [ALA] 1a:20 [U] Ab:190 [SER] A2:15 [U] ✔
1e:86 [ALA] 1a:864 [A] Ab:190 [SER] A2:1144 [A] ✔
1e:123 [LEU] 1a:560 [U] Ab:227 [ARG] A2:657 [G] ✔
1e:87 [SER] 1a:19 [C] Ab:191 [VAL] A2:14 [C] ✔
1e:130 [ASN] 1a:18 [C] Ab:235 [ASN] A2:13 [C] ✔
1e:130 [ASN] 1a:19 [C] Ab:235 [ASN] A2:14 [C] ✔
1e:130 [ASN] 1a:1078 [U] Ab:235 [ASN] A2:1356 [C] ✔
1e:103 [GLY] 1a:8 [A] Ab:207 [ALA] A2:3 [C] ✔
1e:103 [GLY] 1a:9 [G] Ab:207 [ALA] A2:4 [C] ✔
1e:83 [GLU] 1a:863 [U] Ab:187 [ARG] A2:1143 [G] ✔
1e:122 [GLU] 1a:9 [G] Ab:226 [ALA] A2:4 [C] ✔
1e:47 [LYS] 1a:1080 [A] Ab:143 [CYS] A2:1358 [A] ✔
1e:47 [LYS] 1a:1081 [G] Ab:143 [CYS] A2:1359 [U] ✔
1e:25 [ARG] 1a:1081 [G] Ab:121 [ARG] A2:1359 [U] ✔
1e:16 [THR] 1a:16 [A] Ab:112 [VAL] A2:11 [A] ✔
1e:16 [THR] 1a:17 [U] Ab:112 [VAL] A2:12 [U] ✔
1e:16 [THR] 1a:1080 [A] Ab:112 [VAL] A2:1358 [A] ✔
1e:16 [THR] 1a:1081 [G] Ab:112 [VAL] A2:1359 [U] ✔
1e:23 [GLY] 1a:1398 [A] Ab:119 [GLY] A2:1700 [A] ✔
1e:125 [SER] 1a:19 [C] Ab:229 [CYS] A2:14 [C] ✔
1e:125 [SER] 1a:20 [U] Ab:229 [CYS] A2:15 [U] ✔
1e:15 [ARG] 1a:16 [A] Ab:111 [PRO] A2:11 [A] ✔
1e:15 [ARG] 1a:17 [U] Ab:111 [PRO] A2:12 [U] ✔
1e:22 [GLY] 1a:1194 [U] Ab:118 [ALA] A2:1488 [A] ✔
1e:22 [GLY] 1a:1398 [A] Ab:118 [ALA] A2:1700 [A] ✔
1e:104 [ALA] 1a:8 [A] Ab:208 [PRO] A2:3 [C] ❌ 7O7Y_Ab_A2
1e:92 [LYS] 1a:6 [G] Ab:196 [ILE] A2:1 [U] ❌ 7O7Y_Ab_A2
1e:27 [ARG] 1a:1082 [G] Ab:123 [ARG] A2:1360 [U] ❌ 7O7Y_Ab_A2
1e:24 [ARG] 1a:1396 [A] Ab:120 [GLN] A2:1698 [A] ❌ 7O7Y_Ab_A2
1e:19 [MET] 1a:1397 [C] Ab:115 [GLN] A2:1699 [C] ❌ 7O7Y_Ab_A2
1e:14 [ARG] 1a:1079 [G] Ab:110 [MET] A2:1357 [G] ❌ 7O7Y_Ab_A2
1e:14 [ARG] 1a:1080 [A] Ab:110 [MET] A2:1358 [A] ❌ 7O7Y_Ab_A2
1e:127 [ASN] 1a:17 [U] Ab:232 [THR] A2:12 [U] ❌ 7O7Y_Ab_A2
1e:18 [ARG] 1a:1071 [C] Ab:114 [LYS] A2:1349 [G] ❌ 7O7Y_Ab_A2
1e:49 [PRO] 1a:1071 [C] Ab:145 [LYS] A2:1349 [G] ❌ 7O7Y_Ab_A2
1e:49 [PRO] 1a:1072 [G] Ab:145 [LYS] A2:1350 [G] ❌ 7O7Y_Ab_A2
1e:20 [GLN] 1a:923 [A] Ab:116 [THR] A2:1205 [A] ❌ 7O7Y_Ab_A2
1e:20 [GLN] 1a:1070 [U] Ab:116 [THR] A2:1348 [PSU] ❌ 7O7Y_Ab_A2
1e:123 [LEU] 1a:7 [G] Ab:227 [ARG] A2:2 [A] ❌ 7O7Y_Ab_A2
1e:122 [GLU] 1a:8 [A] Ab:226 [ALA] A2:3 [C] ❌ 7O7Y_Ab_A2
1e:122 [GLU] 1a:10 [A] Ab:226 [ALA] A2:5 [U] ❌ 7O7Y_Ab_A2
1e:47 [LYS] 1a:1079 [G] Ab:143 [CYS] A2:1357 [G] ❌ 7O7Y_Ab_A2
1e:25 [ARG] 1a:1070 [U] Ab:121 [ARG] A2:1348 [PSU] ❌ 7O7Y_Ab_A2
1e:25 [ARG] 1a:1193 [G] Ab:121 [ARG] A2:1487 [A] ❌ 7O7Y_Ab_A2
1e:125 [SER] 1a:18 [C] Ab:229 [CYS] A2:13 [C] ❌ 7O7Y_Ab_A2
1e:90 [VAL] 1a:7 [G] Ab:194 [ARG] A2:2 [A] ❌ 7O7Y_Ab_A2
1e:18 [ARG] 1a:1082 [G] Ab:114 [LYS] A2:1360 [U] ❌ 4Y4O_1e_1a
1e:20 [GLN] 1a:1193 [G] Ab:116 [THR] A2:1487 [A] ❌ 4Y4O_1e_1a
1e:22 [GLY] 1a:1193 [G] Ab:118 [ALA] A2:1487 [A] ❌ 4Y4O_1e_1a
1e:23 [GLY] 1a:1194 [U] Ab:119 [GLY] A2:1488 [A] ❌ 4Y4O_1e_1a
1e:23 [GLY] 1a:1193 [G] Ab:119 [GLY] A2:1487 [A] ❌ 4Y4O_1e_1a
1e:24 [ARG] 1a:1194 [U] Ab:120 [GLN] A2:1488 [A] ❌ 4Y4O_1e_1a
1e:25 [ARG] 1a:1082 [G] Ab:121 [ARG] A2:1360 [U] ❌ 4Y4O_1e_1a
1e:27 [ARG] 1a:1080 [A] Ab:123 [ARG] A2:1358 [A] ❌ 4Y4O_1e_1a
1e:49 [PRO] 1a:1193 [G] Ab:145 [LYS] A2:1487 [A] ❌ 4Y4O_1e_1a
1e:83 [GLU] 1a:864 [A] Ab:187 [ARG] A2:1144 [A] ❌ 4Y4O_1e_1a
1e:84 [PHE] 1a:19 [C] Ab:188 [CYS] A2:14 [C] ❌ 4Y4O_1e_1a
1e:85 [GLY] 1a:1078 [U] Ab:189 [GLY] A2:1356 [C] ❌ 4Y4O_1e_1a
1e:85 [GLY] 1a:19 [C] Ab:189 [GLY] A2:14 [C] ❌ 4Y4O_1e_1a
1e:85 [GLY] 1a:18 [C] Ab:189 [GLY] A2:13 [C] ❌ 4Y4O_1e_1a
1e:86 [ALA] 1a:18 [C] Ab:190 [SER] A2:13 [C] ❌ 4Y4O_1e_1a
1e:101 [ILE] 1a:6 [G] Ab:205 [VAL] A2:1 [U] ❌ 4Y4O_1e_1a
1e:103 [GLY] 1a:10 [A] Ab:207 [ALA] A2:5 [U] ❌ 4Y4O_1e_1a
1e:104 [ALA] 1a:9 [G] Ab:208 [PRO] A2:4 [C] ❌ 4Y4O_1e_1a
1e:120 [THR] 1a:9 [G] Ab:224 [THR] A2:4 [C] ❌ 4Y4O_1e_1a
1e:123 [LEU] 1a:20 [U] Ab:227 [ARG] A2:15 [U] ❌ 4Y4O_1e_1a
1e:61 [TYR] 1a:1074 [G] Ab:157 [LEU] A2:1352 [G] ❌ 7O7Y_Ab:157, 7O7Y_A2:1352 no longer at interface
1e:126 [ARG] 1a:558 [G] Ab:230 [THR] A2:655 [A] ❌ 7O7Y_A2:655 no longer at interface
1e:126 [ARG] 1a:559 [A] Ab:230 [THR] A2:656 [A] ❌ 7O7Y_A2:656 no longer at interface
1e:121 [LYS] 1a:558 [G] Ab:225 [SER] A2:655 [A] ❌ 7O7Y_A2:655 no longer at interface
1e:121 [LYS] 1a:559 [A] Ab:225 [SER] A2:656 [A] ❌ 7O7Y_A2:656 no longer at interface
1e:64 [ARG] 1a:1074 [G] Ab:160 [LEU] A2:1352 [G] ❌ 7O7Y_Ab:160, 7O7Y_A2:1352 no longer at interface
1e:64 [ARG] 1a:1075 [C] Ab:160 [LEU] A2:1353 [G] ❌ 7O7Y_Ab:160, 7O7Y_A2:1353 no longer at interface
1e:20 [GLN] 1a:1069 [C] Ab:116 [THR] A2:1347 [U] ❌ 7O7Y_A2:1347 no longer at interface
1e:60 [TYR] 1a:1074 [G] Ab:156 [ILE] A2:1352 [G] ❌ 7O7Y_Ab:156, 7O7Y_A2:1352 no longer at interface
1e:47 [LYS] 1a:1077 [G] Ab:143 [CYS] A2:1355 [G] ❌ 7O7Y_A2:1355 no longer at interface
1e:25 [ARG] 1a:1069 [C] Ab:121 [ARG] A2:1347 [U] ❌ 7O7Y_A2:1347 no longer at interface
1e:25 [ARG] 1a:1192 [C] Ab:121 [ARG] A2:1486 [U] ❌ 7O7Y_A2:1486 no longer at interface
1e:22 [GLY] 1a:1195 [C] Ab:118 [ALA] A2:1489 [C] ❌ 7O7Y_A2:1489 no longer at interface
1e:21 [ALA] 1a:1064 [G] Ab:117 [ARG] A2:1342 [C] ❌ 4Y4O_1a:1064 no longer at interface
1e:21 [ALA] 1a:1387 [G] Ab:117 [ARG] A2:1689 [C] ❌ 4Y4O_1a:1387 no longer at interface
1e:21 [ALA] 1a:1388 [C] Ab:117 [ARG] A2:1690 [C] ❌ 4Y4O_1a:1388 no longer at interface
1e:83 [GLU] 1a:862 [C] Ab:187 [ARG] A2:1142 [G] ❌ 4Y4O_1a:862 no longer at interface
1e:85 [GLY] 1a:865 [A] Ab:189 [GLY] A2:1145 [A] ❌ 4Y4O_1a:865 no longer at interface
1e:93 [PRO] 1a:6 [G] Ab:197 [PRO] A2:1 [U] ❌ 7O7Y_Ab:197 no longer at interface
1e:129 [ILE] 1a:18 [C] Ab:234 [GLY] A2:13 [C] ❌ 7O7Y_Ab:234 no longer at interface
1e:129 [ILE] 1a:1078 [U] Ab:234 [GLY] A2:1356 [C] ❌ 7O7Y_Ab:234 no longer at interface
1e:129 [ILE] 1a:1079 [G] Ab:234 [GLY] A2:1357 [G] ❌ 7O7Y_Ab:234 no longer at interface
1e:107 [ARG] 1a:8 [A] Ab:211 [LYS] A2:3 [C] ❌ 7O7Y_Ab:211 no longer at interface
1e:57 [LYS] 1a:1072 [G] Ab:153 [GLY] A2:1350 [G] ❌ 7O7Y_Ab:153 no longer at interface
1e:57 [LYS] 1a:1073 [U] Ab:153 [GLY] A2:1351 [U] ❌ 7O7Y_Ab:153 no longer at interface
1e:48 [ALA] 1a:1072 [G] Ab:144 [SER] A2:1350 [G] ❌ 7O7Y_Ab:144 no longer at interface
1e:60 [TYR] 1a:1073 [U] Ab:156 [ILE] A2:1351 [U] ❌ 7O7Y_Ab:156 no longer at interface
1e:94 [ALA] 1a:6 [G] Ab:198 [ALA] A2:1 [U] ❌ 7O7Y_Ab:198 no longer at interface
1e:95 [ALA] 1a:6 [G] Ab:199 [PRO] A2:1 [U] ❌ 7O7Y_Ab:199 no longer at interface
1e:53 [LEU] 1a:1072 [G] Ab:149 [THR] A2:1350 [G] ❌ 7O7Y_Ab:149 no longer at interface
1e:45 [PHE] 1a:1079 [G] Ab:141 [VAL] A2:1357 [G] ❌ 7O7Y_Ab:141 no longer at interface
1e:45 [PHE] 1a:1080 [A] Ab:141 [VAL] A2:1358 [A] ❌ 7O7Y_Ab:141 no longer at interface
1e:29 [GLY] 1a:1080 [A] Ab:125 [LYS] A2:1358 [A] ❌ 4Y4O_1e:29 no longer at interface
1e:29 [GLY] 1a:1079 [G] Ab:125 [LYS] A2:1357 [G] ❌ 4Y4O_1e:29 no longer at interface
1e:46 [GLY] 1a:1073 [U] Ab:142 [LYS] A2:1351 [U] ❌ 4Y4O_1e:46 no longer at interface
1e:46 [GLY] 1a:1072 [G] Ab:142 [LYS] A2:1350 [G] ❌ 4Y4O_1e:46 no longer at interface
1e:105 [VAL] 1a:10 [A] Ab:209 [VAL] A2:5 [U] ❌ 4Y4O_1e:105 no longer at interface
1e:131 [ILE] 1a:10 [A] Ab:236 [PHE] A2:5 [U] ❌ 4Y4O_1e:131 no longer at interface
1e:131 [ILE] 1a:9 [G] Ab:236 [PHE] A2:4 [C] ❌ 4Y4O_1e:131 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like 0.93 1.93 0.17 0.91 0.93 0.81 0.78 0.67 0.67 0.20 0.49


Other pairs involving 4Y4O_1e_1a or 7O7Y_Ab_A2

Total number of entries: 7

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6S0X_e_a 7O7Y_Ab_A2 0.44 0.89 2.76 0.17 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like compare
7K00_E_A 7O7Y_Ab_A2 0.73 0.92 1.76 0.17 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like compare
4Y4O_1e_1a 6S0X_e_a 0.59 0.96 2.62 0.5 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA compare
4Y4O_1e_1a 7K00_E_A 0.83 0.98 0.91 0.44 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA compare
4Y4O_1e_1a 7RYG_e_a 0.81 0.92 2.08 0.5 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like Bacterial small subunit ribosomal RNA compare
4Y4O_1e_1a 7O7Y_Ab_A2 0.67 0.93 1.93 0.17 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like compare
4Y4O_1e_1a 7O7Z_Ab_A2 0.67 0.93 1.9 0.16 Ribosomal protein S5 domain 2-like & dsRNA-binding domain-like compare