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All interfaces > All interologs > Interface groups > group113 > 6S0Z_T_B vs 6YSI_R_5

Interface analysis


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Common contacts -

6S0Z_T
6S0Z_B
6YSI_R
6YSI_5
Conserved?
T:90 [ASP] B:73 [G] R:94 [ASP] 5:74 [G] ✔
T:90 [ASP] B:99 [G] R:94 [ASP] 5:100 [G] ✔
T:22 [ARG] B:74 [G] R:25 [ARG] 5:75 [G] ✔
T:22 [ARG] B:75 [U] R:25 [ARG] 5:76 [U] ✔
T:29 [ALA] B:73 [G] R:32 [ALA] 5:74 [G] ✔
T:32 [TYR] B:71 [A] R:35 [TYR] 5:72 [A] ✔
T:32 [TYR] B:72 [U] R:35 [TYR] 5:73 [U] ✔
T:32 [TYR] B:100 [U] R:35 [TYR] 5:101 [U] ✔
T:32 [TYR] B:101 [A] R:35 [TYR] 5:102 [A] ✔
T:33 [GLY] B:101 [A] R:36 [GLY] 5:102 [A] ✔
T:19 [LYS] B:89 [U] R:22 [ARG] 5:90 [C] ✔
T:19 [LYS] B:90 [U] R:22 [ARG] 5:91 [C] ✔
T:9 [ARG] B:73 [G] R:11 [ARG] 5:74 [G] ✔
T:9 [ARG] B:74 [G] R:11 [ARG] 5:75 [G] ✔
T:20 [GLN] B:91 [C] R:23 [ARG] 5:92 [A] ✔
T:28 [PRO] B:74 [G] R:31 [PRO] 5:75 [G] ✔
T:87 [THR] B:74 [G] R:91 [MET] 5:75 [G] ✔
T:87 [THR] B:75 [U] R:91 [MET] 5:76 [U] ✔
T:38 [ASN] B:71 [A] R:41 [PRO] 5:72 [A] ✔
T:38 [ASN] B:72 [U] R:41 [PRO] 5:73 [U] ✔
T:92 [LEU] B:101 [A] R:96 [LYS] 5:102 [A] ✔
T:30 [VAL] B:72 [U] R:33 [ILE] 5:73 [U] ✔
T:30 [VAL] B:73 [G] R:33 [ILE] 5:74 [G] ✔
T:78 [GLN] B:73 [G] R:82 [GLN] 5:74 [G] ✔
T:78 [GLN] B:74 [G] R:82 [GLN] 5:75 [G] ✔
T:78 [GLN] B:75 [U] R:82 [GLN] 5:76 [U] ✔
T:18 [LEU] B:74 [G] R:21 [SER] 5:75 [G] ✔
T:18 [LEU] B:75 [U] R:21 [SER] 5:76 [U] ✔
T:88 [HIS] B:73 [G] R:92 [HIS] 5:74 [G] ✔
T:88 [HIS] B:74 [G] R:92 [HIS] 5:75 [G] ✔
T:15 [ARG] B:76 [A] R:18 [LYS] 5:77 [A] ✔
T:15 [ARG] B:77 [G] R:18 [LYS] 5:78 [G] ✔
T:15 [ARG] B:78 [U] R:18 [LYS] 5:79 [U] ✔
T:15 [ARG] B:94 [C] R:18 [LYS] 5:95 [U] ✔
T:15 [ARG] B:95 [U] R:18 [LYS] 5:96 [G] ✔
T:16 [SER] B:91 [C] R:19 [GLY] 5:92 [A] ✔
T:75 [ALA] B:100 [U] R:79 [GLN] 5:101 [U] ✔
T:13 [GLN] B:74 [G] R:15 [LYS] 5:75 [G] ✔
T:19 [LYS] B:91 [C] R:22 [ARG] 5:92 [A] ❌ 6YSI_R_5
T:15 [ARG] B:92 [C] R:18 [LYS] 5:93 [U] ❌ 6YSI_R_5
T:16 [SER] B:92 [C] R:19 [GLY] 5:93 [U] ❌ 6YSI_R_5
T:14 [THR] B:92 [C] R:17 [GLY] 5:93 [U] ❌ 6YSI_R_5
T:14 [THR] B:74 [G] R:17 [GLY] 5:75 [G] ❌ 6S0Z_T_B
T:14 [THR] B:75 [U] R:17 [GLY] 5:76 [U] ❌ 6S0Z_T_B
T:14 [THR] B:95 [U] R:17 [GLY] 5:96 [G] ❌ 6S0Z_T_B
T:15 [ARG] B:75 [U] R:18 [LYS] 5:76 [U] ❌ 6S0Z_T_B
T:19 [LYS] B:77 [G] R:22 [ARG] 5:78 [G] ❌ 6S0Z_T_B
T:19 [LYS] B:76 [A] R:22 [ARG] 5:77 [A] ❌ 6S0Z_T_B
T:19 [LYS] B:75 [U] R:22 [ARG] 5:76 [U] ❌ 6S0Z_T_B
T:20 [GLN] B:92 [C] R:23 [ARG] 5:93 [U] ❌ 6S0Z_T_B
T:75 [ALA] B:101 [A] R:79 [GLN] 5:102 [A] ❌ 6S0Z_T_B
T:90 [ASP] B:100 [U] R:94 [ASP] 5:101 [U] ❌ 6S0Z_T_B
T:12 [LYS] B:93 [G] R:14 [ASP] 5:94 [G] ❌ 6YSI_R:14, 6YSI_5:94 no longer at interface
T:15 [ARG] B:93 [G] R:18 [LYS] 5:94 [G] ❌ 6YSI_5:94 no longer at interface
T:14 [THR] B:93 [G] R:17 [GLY] 5:94 [G] ❌ 6YSI_5:94 no longer at interface
T:92 [LEU] B:102 [G] R:96 [LYS] 5:103 [A] ❌ 6S0Z_B:102 no longer at interface
T:12 [LYS] B:94 [C] R:14 [ASP] 5:95 [U] ❌ 6YSI_R:14 no longer at interface
T:40 [SER] B:73 [G] R:43 [ALA] 5:74 [G] ❌ 6YSI_R:43 no longer at interface
T:23 [LYS] B:89 [U] R:26 [ARG] 5:90 [C] ❌ 6S0Z_T:23 no longer at interface
T:23 [LYS] B:90 [U] R:26 [ARG] 5:91 [C] ❌ 6S0Z_T:23 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L25-like 5S ribosomal RNA 0.9 1.95 0.39 0.85 0.85 0.91 0.94 0.71 0.62 0.41 0.36


Other pairs involving 6S0Z_T_B or 6YSI_R_5

Total number of entries: 10

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1DFU_P_M,N 6YSI_R_5 0.80 0.81 0.65 0.47 Ribosomal protein L25-like compare
6S0Z_T_B 7ASM_T_B 0.96 0.99 0.47 1.0 Ribosomal protein L25-like 5S ribosomal RNA compare
6S0Z_T_B 6YSI_R_5 0.71 0.9 1.95 0.39 Ribosomal protein L25-like 5S ribosomal RNA compare
6YSI_R_5 7ASM_T_B 0.65 0.9 2.0 0.39 Ribosomal protein L25-like 5S ribosomal RNA compare
1FEU_A_B,C 6S0Z_T_B 0.64 0.54 0.91 0.3 Ribosomal protein L25-like compare
1FEU_A_B,C 6YSI_R_5 0.67 0.55 1.0 0.3 Ribosomal protein L25-like compare
4Y4O_1Z_1B 6S0Z_T_B 0.63 0.87 1.54 0.35 Ribosomal protein L25-like 5S ribosomal RNA compare
4Y4O_1Z_1B 6YSI_R_5 0.60 0.87 1.36 0.3 Ribosomal protein L25-like 5S ribosomal RNA compare
4YBB_DW_DB 6S0Z_T_B 0.64 0.91 2.15 0.39 Ribosomal protein L25-like 5S ribosomal RNA compare
4YBB_DW_DB 6YSI_R_5 0.92 0.97 0.56 0.83 Ribosomal protein L25-like 5S ribosomal RNA compare