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All interfaces > All interologs > Interface groups > group122 > 4Y4O_1S_1A vs 7RYG_N_A

Interface analysis


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Common contacts -

4Y4O_1S
4Y4O_1A
7RYG_N
7RYG_A
Conserved?
1S:106 [ARG] 1A:2388 [A] N:110 [ARG] A:2372 [A] ✔
1S:106 [ARG] 1A:2389 [A] N:110 [ARG] A:2373 [A] ✔
1S:85 [VAL] 1A:2390 [A] N:89 [VAL] A:2374 [A] ✔
1S:10 [ARG] 1A:2306 [C] N:11 [ARG] A:2290 [G] ✔
1S:10 [ARG] 1A:2307 [C] N:11 [ARG] A:2291 [C] ✔
1S:18 [ILE] 1A:2390 [A] N:19 [ILE] A:2374 [A] ✔
1S:91 [PRO] 1A:2306 [C] N:95 [GLY] A:2290 [G] ✔
1S:13 [ARG] 1A:2346 [G] N:14 [SER] A:2330 [A] ✔
1S:13 [ARG] 1A:2347 [A] N:14 [SER] A:2331 [A] ✔
1S:12 [PHE] 1A:2346 [G] N:13 [LYS] A:2330 [A] ✔
1S:9 [ARG] 1A:2308 [U] N:10 [ARG] A:2292 [U] ✔
1S:9 [ARG] 1A:2345 [A] N:10 [ARG] A:2329 [A] ✔
1S:9 [ARG] 1A:2347 [A] N:10 [ARG] A:2331 [A] ✔
1S:87 [PHE] 1A:2388 [A] N:91 [PHE] A:2372 [A] ✔
1S:87 [PHE] 1A:2389 [A] N:91 [PHE] A:2373 [A] ✔
1S:86 [ALA] 1A:2390 [A] N:90 [ALA] A:2374 [A] ✔
1S:17 [ARG] 1A:2390 [A] N:18 [HIS] A:2374 [A] ✔
1S:17 [ARG] 1A:2391 [G] N:18 [HIS] A:2375 [G] ✔
1S:17 [ARG] 1A:2392 [C] N:18 [HIS] A:2376 [U] ✔
1S:16 [ASN] 1A:2346 [G] N:17 [LEU] A:2330 [A] ✔
1S:89 [ARG] 1A:2305 [C] N:93 [ARG] A:2289 [C] ✔
1S:89 [ARG] 1A:2306 [C] N:93 [ARG] A:2290 [G] ✔
1S:89 [ARG] 1A:2388 [A] N:93 [ARG] A:2372 [A] ✔
1S:112 [PHE] 1A:2388 [A] N:116 [PHE] A:2372 [A] ✔
1S:112 [PHE] 1A:2389 [A] N:116 [PHE] A:2373 [A] ✔
1S:18 [ILE] 1A:2389 [A] N:19 [ILE] A:2373 [A] ❌ 7RYG_N_A
1S:13 [ARG] 1A:2306 [C] N:14 [SER] A:2290 [G] ❌ 7RYG_N_A
1S:13 [ARG] 1A:2307 [C] N:14 [SER] A:2291 [C] ❌ 7RYG_N_A
1S:9 [ARG] 1A:2346 [G] N:10 [ARG] A:2330 [A] ❌ 7RYG_N_A
1S:14 [VAL] 1A:2306 [C] N:15 [THR] A:2290 [G] ❌ 7RYG_N_A
1S:112 [PHE] 1A:2390 [A] N:116 [PHE] A:2374 [A] ❌ 7RYG_N_A
1S:9 [ARG] 1A:2307 [C] N:10 [ARG] A:2291 [C] ❌ 4Y4O_1S_1A
1S:12 [PHE] 1A:2345 [A] N:13 [LYS] A:2329 [A] ❌ 4Y4O_1S_1A
1S:14 [VAL] 1A:2390 [A] N:15 [THR] A:2374 [A] ❌ 4Y4O_1S_1A
1S:14 [VAL] 1A:2305 [C] N:15 [THR] A:2289 [C] ❌ 4Y4O_1S_1A
1S:17 [ARG] 1A:2346 [G] N:18 [HIS] A:2330 [A] ❌ 4Y4O_1S_1A
1S:17 [ARG] 1A:2303 [U] N:18 [HIS] A:2287 [U] ❌ 7RYG_A:2287 no longer at interface
1S:17 [ARG] 1A:2304 [C] N:18 [HIS] A:2288 [G] ❌ 7RYG_A:2288 no longer at interface
1S:6 [ALA] 1A:2307 [C] N:7 [SER] A:2291 [C] ❌ 7RYG_N:7 no longer at interface
1S:6 [ALA] 1A:2308 [U] N:7 [SER] A:2292 [U] ❌ 7RYG_N:7 no longer at interface
1S:93 [LYS] 1A:2306 [C] N:97 [LYS] A:2290 [G] ❌ 7RYG_N:97 no longer at interface
1S:23 [ARG] 1A:2390 [A] N:23 [GLY] A:2374 [A] ❌ 7RYG_N:23 no longer at interface
1S:23 [ARG] 1A:2391 [G] N:23 [GLY] A:2375 [G] ❌ 7RYG_N:23 no longer at interface
1S:92 [TYR] 1A:2306 [C] N:96 [PHE] A:2290 [G] ❌ 7RYG_N:96 no longer at interface
1S:20 [ARG] 1A:2346 [G] N:21 [ALA] A:2330 [A] ❌ 4Y4O_1S:20 no longer at interface
1S:22 [GLY] 1A:2390 [A] N:22 [LEU] A:2374 [A] ❌ 4Y4O_1S:22 no longer at interface
1S:22 [GLY] 1A:2391 [G] N:22 [LEU] A:2375 [G] ❌ 4Y4O_1S:22 no longer at interface
1S:22 [GLY] 1A:2392 [C] N:22 [LEU] A:2376 [U] ❌ 4Y4O_1S:22 no longer at interface
1S:24 [LEU] 1A:2390 [A] N:24 [ALA] A:2374 [A] ❌ 4Y4O_1S:24 no longer at interface
1S:95 [HIS] 1A:2388 [A] N:98 [TYR] A:2372 [A] ❌ 4Y4O_1S:95 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribonuclease H-like Bacterial large subunit ribosomal RNA 0.95 3.79 0.47 0.9 0.96 0.79 1.0 0.56 0.46 0.40 0.56


Other pairs involving 4Y4O_1S_1A or 7RYG_N_A

Total number of entries: 11

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
4Y4O_1S_1A 7K00_n_a 0.77 0.96 1.65 0.43 Ribonuclease H-like Bacterial large subunit ribosomal RNA compare
4Y4O_1S_1A 6S0Z_M_A 0.62 0.97 2.94 0.38 Ribonuclease H-like Bacterial large subunit ribosomal RNA compare
4Y4O_1S_1A 6AZ3_O_2 0.40 0.75 4.24 0.0 Ribonuclease H-like compare
4Y4O_1S_1A 7RYG_N_A 0.56 0.95 3.79 0.47 Ribonuclease H-like Bacterial large subunit ribosomal RNA compare
4Y4O_1S_1A 7O7Y_BD_B5 0.36 0.89 4.42 0.04 Ribonuclease H-like compare
6AZ3_O_2 7RYG_N_A 0.22 0.74 3.63 0.0 Ribonuclease H-like compare
6S0Z_M_A 7RYG_N_A 0.66 0.98 2.44 0.37 Ribonuclease H-like Bacterial large subunit ribosomal RNA compare
1YHQ_N_0 7RYG_N_A 0.17 0.92 5.16 0.05 Ribonuclease H-like compare
1YHQ_N_0 4Y4O_1S_1A 0.37 0.91 4.27 0.09 Ribonuclease H-like compare
1VQ8_N_0 7RYG_N_A 0.17 0.92 5.13 0.05 Ribonuclease H-like compare
1VQ8_N_0 4Y4O_1S_1A 0.37 0.91 4.22 0.09 Ribonuclease H-like compare