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All interfaces > All interologs > Interface groups > group123 > 1YHQ_N_9 vs 7OF0_P_B

Interface analysis


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Common contacts -

1YHQ_N
1YHQ_9
7OF0_P
7OF0_B
Conserved?
N:77 [ASN] 9:49 [G] P:121 [ASN] B:1641 [G] ✔
N:115 [VAL] 9:48 [C] P:158 [MET] B:1640 [A] ✔
N:42 [HIS] 9:26 [C] P:89 [HIS] B:1622 [A] ✔
N:42 [HIS] 9:27 [C] P:89 [HIS] B:1623 [G] ✔
N:108 [SER] 9:46 [C] P:151 [TRP] B:1638 [U] ✔
N:108 [SER] 9:47 [A] P:151 [TRP] B:1639 [U] ✔
N:39 [SER] 9:26 [C] P:86 [THR] B:1622 [A] ✔
N:39 [SER] 9:27 [C] P:86 [THR] B:1623 [G] ✔
N:39 [SER] 9:28 [U] P:86 [THR] B:1624 [C] ✔
N:78 [MET] 9:48 [C] P:122 [VAL] B:1640 [A] ✔
N:78 [MET] 9:49 [G] P:122 [VAL] B:1641 [G] ✔
N:40 [ASN] 9:27 [C] P:87 [GLN] B:1623 [G] ✔
N:40 [ASN] 9:28 [U] P:87 [GLN] B:1624 [C] ✔
N:40 [ASN] 9:29 [C] P:87 [GLN] B:1625 [A] ✔
N:40 [ASN] 9:30 [C] P:87 [GLN] B:1626 [C] ✔
N:40 [ASN] 9:50 [G] P:87 [GLN] B:1642 [G] ✔
N:40 [ASN] 9:51 [A] P:87 [GLN] B:1643 [A] ✔
N:114 [LYS] 9:47 [A] P:157 [SER] B:1639 [U] ✔
N:114 [LYS] 9:48 [C] P:157 [SER] B:1640 [A] ✔
N:38 [LYS] 9:28 [U] P:85 [ARG] B:1624 [C] ✔
N:38 [LYS] 9:48 [C] P:85 [ARG] B:1640 [A] ✔
N:76 [GLY] 9:49 [G] P:120 [ARG] B:1641 [G] ✔
N:76 [GLY] 9:50 [G] P:120 [ARG] B:1642 [G] ✔
N:74 [PRO] 9:50 [G] P:118 [SER] B:1642 [G] ✔
N:113 [SER] 9:47 [A] P:156 [ASP] B:1639 [U] ✔
N:113 [SER] 9:48 [C] P:156 [ASP] B:1640 [A] ✔
N:41 [LYS] 9:27 [C] P:88 [HIS] B:1623 [G] ✔
N:41 [LYS] 9:28 [U] P:88 [HIS] B:1624 [C] ✔
N:41 [LYS] 9:51 [A] P:88 [HIS] B:1643 [A] ✔
N:112 [GLY] 9:48 [C] P:155 [SER] B:1640 [A] ✔
N:77 [ASN] 9:50 [G] P:121 [ASN] B:1642 [G] ❌ 7OF0_P_B
N:114 [LYS] 9:49 [G] P:157 [SER] B:1641 [G] ❌ 7OF0_P_B
N:38 [LYS] 9:47 [A] P:85 [ARG] B:1639 [U] ❌ 7OF0_P_B
N:74 [PRO] 9:51 [A] P:118 [SER] B:1643 [A] ❌ 7OF0_P_B
N:41 [LYS] 9:25 [G] P:88 [HIS] B:1621 [A] ❌ 7OF0_P_B
N:41 [LYS] 9:26 [C] P:88 [HIS] B:1622 [A] ❌ 7OF0_P_B
N:76 [GLY] 9:51 [A] P:120 [ARG] B:1643 [A] ❌ 1YHQ_N_9
N:112 [GLY] 9:47 [A] P:155 [SER] B:1639 [U] ❌ 1YHQ_N_9
N:40 [ASN] 9:52 [A] P:87 [GLN] B:1644 [G] ❌ 1YHQ_N_9
N:41 [LYS] 9:52 [A] P:88 [HIS] B:1644 [G] ❌ 1YHQ_N_9
N:42 [HIS] 9:25 [G] P:89 [HIS] B:1621 [A] ❌ 1YHQ_N_9
N:79 [PRO] 9:49 [G] P:123 [VAL] B:1641 [G] ❌ 7OF0_P:123 no longer at interface
N:110 [THR] 9:46 [C] P:153 [ALA] B:1638 [U] ❌ 7OF0_P:153 no longer at interface
N:110 [THR] 9:47 [A] P:153 [ALA] B:1639 [U] ❌ 7OF0_P:153 no longer at interface
N:107 [ASN] 9:47 [A] P:150 [PRO] B:1639 [U] ❌ 7OF0_P:150 no longer at interface
N:62 [HIS] 9:27 [C] P:106 [SER] B:1623 [G] ❌ 7OF0_P:106 no longer at interface
N:64 [SER] 9:25 [G] P:108 [ARG] B:1621 [A] ❌ 1YHQ_N:64 no longer at interface
N:64 [SER] 9:26 [C] P:108 [ARG] B:1622 [A] ❌ 1YHQ_N:64 no longer at interface
N:67 [ALA] 9:25 [G] P:110 [TRP] B:1621 [A] ❌ 1YHQ_N:67 no longer at interface
N:73 [ALA] 9:50 [G] P:117 [TYR] B:1642 [G] ❌ 1YHQ_N:73 no longer at interface
N:73 [ALA] 9:51 [A] P:117 [TYR] B:1643 [A] ❌ 1YHQ_N:73 no longer at interface
N:109 [PRO] 9:47 [A] P:152 [GLU] B:1639 [U] ❌ 1YHQ_N:109 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribonuclease H-like 0.56 1.79 0.11 0.63 0.21 0.74 1.0 0.69 0.47 0.22 0.50


Other pairs involving 1YHQ_N_9 or 7OF0_P_B

Total number of entries: 15

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1YHQ_N_9 7RYG_N_B 0.65 0.86 1.69 0.18 Ribonuclease H-like 5S ribosomal RNA compare
1YHQ_N_9 7O7Y_BD_B7 0.86 0.91 1.71 0.37 Ribonuclease H-like 5S ribosomal RNA compare
1YHQ_N_9 7OF0_P_B 0.69 0.56 1.79 0.11 Ribonuclease H-like compare
1YHQ_N_9 7O9M_P_B 0.66 0.55 1.72 0.1 Ribonuclease H-like compare
1YHQ_N_9 4Y4O_1S_1B 0.65 0.87 2.31 0.26 Ribonuclease H-like 5S ribosomal RNA compare
1YHQ_N_9 6S0Z_M_B 0.70 0.83 1.98 0.24 Ribonuclease H-like 5S ribosomal RNA compare
1YHQ_N_9 6AZ3_O_8 0.87 0.9 1.8 0.44 Ribonuclease H-like 5S ribosomal RNA compare
7O7Y_BD_B7 7OF0_P_B 0.69 0.56 1.89 0.11 Ribonuclease H-like compare
6S0Z_M_B 7OF0_P_B 0.64 0.54 2.86 0.16 Ribonuclease H-like compare
6AZ3_O_8 7OF0_P_B 0.76 0.56 1.99 0.11 Ribonuclease H-like compare
7O9M_P_B 7OF0_P_B 0.94 0.98 0.53 0.95 Ribonuclease H-like compare
7OF0_P_B 7RYG_N_B 0.63 0.56 1.99 0.21 Ribonuclease H-like compare
1VQ8_N_9 1YHQ_N_9 1.00 1.0 0.19 1.0 Ribonuclease H-like 5S ribosomal RNA compare
1VQ8_N_9 7OF0_P_B 0.67 0.57 1.81 0.11 Ribonuclease H-like compare
4Y4O_1S_1B 7OF0_P_B 0.72 0.54 2.33 0.11 Ribonuclease H-like compare