RNAprotDB

All interfaces > All interologs > Interface groups > group126 > 4Y4O_1F_1A vs 7K00_e_a

Interface analysis


mouse controls

Style

Protein

Cartoon
Licorice
Surface

RNA

Cartoon
Licorice
Surface

Color

Structure
Structure (with hetatm)
Chain
Chainbow

View

Focus on

Interface
RNA
Protein
All

Show chains

Interface

show interface as licorice

Common contacts -

4Y4O_1F
4Y4O_1A
7K00_e
7K00_a
Conserved?
1F:134 [GLY] 1A:345 [G] e:129 [PRO] a:321 [U] ✔
1F:169 [ASN] 1A:344 [A] e:163 [ASN] a:320 [A] ✔
1F:169 [ASN] 1A:346 [A] e:163 [ASN] a:322 [A] ✔
1F:169 [ASN] 1A:347 [G] e:163 [ASN] a:323 [C] ✔
1F:73 [ALA] 1A:1301 [U] e:68 [ALA] a:1255 [U] ✔
1F:73 [ALA] 1A:1302 [G] e:68 [ALA] a:1256 [G] ✔
1F:73 [ALA] 1A:1303 [C] e:68 [ALA] a:1257 [C] ✔
1F:140 [LEU] 1A:344 [A] e:135 [ALA] a:320 [A] ✔
1F:41 [LEU] 1A:469 [A] e:36 [ALA] a:443 [A] ✔
1F:84 [VAL] 1A:474 [U] e:79 [ARG] a:448 [U] ✔
1F:84 [VAL] 1A:475 [A] e:79 [ARG] a:449 [A] ✔
1F:84 [VAL] 1A:1303 [C] e:79 [ARG] a:1257 [C] ✔
1F:84 [VAL] 1A:1304 [C] e:79 [ARG] a:1258 [U] ✔
1F:42 [ALA] 1A:469 [A] e:37 [ALA] a:443 [A] ✔
1F:59 [TYR] 1A:495 [G] e:54 [GLY] a:469 [G] ✔
1F:59 [TYR] 1A:845 [G] e:54 [GLY] a:798 [G] ✔
1F:74 [ARG] 1A:720 [C] e:69 [ARG] a:673 [C] ✔
1F:74 [ARG] 1A:721 [G] e:69 [ARG] a:674 [G] ✔
1F:74 [ARG] 1A:854 [U] e:69 [ARG] a:807 [U] ✔
1F:74 [ARG] 1A:1301 [U] e:69 [ARG] a:1255 [U] ✔
1F:74 [ARG] 1A:2082 [A] e:69 [ARG] a:2060 [A] ✔
1F:74 [ARG] 1A:2456 [G] e:69 [ARG] a:2444 [G] ✔
1F:74 [ARG] 1A:2457 [G] e:69 [ARG] a:2445 [2MG] ✔
1F:82 [ILE] 1A:607 [C] e:77 [ILE] a:584 [C] ✔
1F:82 [ILE] 1A:608 [G] e:77 [ILE] a:585 [G] ✔
1F:82 [ILE] 1A:720 [C] e:77 [ILE] a:673 [C] ✔
1F:82 [ILE] 1A:1300 [A] e:77 [ILE] a:1254 [A] ✔
1F:82 [ILE] 1A:1302 [G] e:77 [ILE] a:1256 [G] ✔
1F:82 [ILE] 1A:1303 [C] e:77 [ILE] a:1257 [C] ✔
1F:80 [ALA] 1A:720 [C] e:75 [SER] a:673 [C] ✔
1F:80 [ALA] 1A:721 [G] e:75 [SER] a:674 [G] ✔
1F:53 [THR] 1A:716 [G] e:48 [THR] a:669 [G] ✔
1F:53 [THR] 1A:848 [G] e:48 [THR] a:801 [G] ✔
1F:97 [TYR] 1A:470 [C] e:92 [HIS] a:444 [C] ✔
1F:44 [ARG] 1A:469 [A] e:39 [ALA] a:443 [A] ✔
1F:88 [VAL] 1A:476 [G] e:83 [VAL] a:450 [G] ✔
1F:88 [VAL] 1A:1294 [G] e:83 [VAL] a:1248 [G] ✔
1F:168 [ARG] 1A:345 [G] e:162 [ARG] a:321 [U] ✔
1F:168 [ARG] 1A:346 [A] e:162 [ARG] a:322 [A] ✔
1F:168 [ARG] 1A:364 [A] e:162 [ARG] a:340 [A] ✔
1F:104 [LYS] 1A:623 [G] e:99 [LYS] a:600 [G] ✔
1F:104 [LYS] 1A:624 [C] e:99 [LYS] a:601 [C] ✔
1F:104 [LYS] 1A:628 [C] e:99 [LYS] a:605 [G] ✔
1F:104 [LYS] 1A:629 [U] e:99 [LYS] a:606 [U] ✔
1F:60 [SER] 1A:494 [G] e:55 [SER] a:468 [G] ✔
1F:60 [SER] 1A:495 [G] e:55 [SER] a:469 [G] ✔
1F:60 [SER] 1A:844 [C] e:55 [SER] a:797 [G] ✔
1F:60 [SER] 1A:845 [G] e:55 [SER] a:798 [G] ✔
1F:85 [GLY] 1A:474 [U] e:80 [SER] a:448 [U] ✔
1F:85 [GLY] 1A:475 [A] e:80 [SER] a:449 [A] ✔
1F:136 [THR] 1A:344 [A] e:131 [THR] a:320 [A] ✔
1F:136 [THR] 1A:345 [G] e:131 [THR] a:321 [U] ✔
1F:136 [THR] 1A:346 [A] e:131 [THR] a:322 [A] ✔
1F:69 [HIS] 1A:2081 [A] e:64 [GLY] a:2059 [A] ✔
1F:69 [HIS] 1A:2082 [A] e:64 [GLY] a:2060 [A] ✔
1F:83 [PHE] 1A:1303 [C] e:78 [TRP] a:1257 [C] ✔
1F:170 [LEU] 1A:344 [A] e:164 [LEU] a:320 [A] ✔
1F:170 [LEU] 1A:347 [G] e:164 [LEU] a:323 [C] ✔
1F:71 [GLY] 1A:1301 [U] e:66 [GLY] a:1255 [U] ✔
1F:71 [GLY] 1A:2081 [A] e:66 [GLY] a:2059 [A] ✔
1F:71 [GLY] 1A:2082 [A] e:66 [GLY] a:2060 [A] ✔
1F:75 [HIS] 1A:721 [G] e:70 [SER] a:674 [G] ✔
1F:75 [HIS] 1A:722 [A] e:70 [SER] a:675 [A] ✔
1F:48 [THR] 1A:38 [A] e:43 [THR] a:38 [A] ✔
1F:48 [THR] 1A:39 [C] e:43 [THR] a:39 [G] ✔
1F:48 [THR] 1A:468 [G] e:43 [THR] a:442 [G] ✔
1F:48 [THR] 1A:470 [C] e:43 [THR] a:444 [C] ✔
1F:166 [ALA] 1A:345 [G] e:160 [ALA] a:321 [U] ✔
1F:99 [TYR] 1A:707 [G] e:94 [GLN] a:660 [C] ✔
1F:67 [GLN] 1A:721 [G] e:62 [GLN] a:674 [G] ✔
1F:67 [GLN] 1A:722 [A] e:62 [GLN] a:675 [A] ✔
1F:67 [GLN] 1A:723 [A] e:62 [GLN] a:676 [A] ✔
1F:67 [GLN] 1A:1301 [U] e:62 [GLN] a:1255 [U] ✔
1F:67 [GLN] 1A:2082 [A] e:62 [GLN] a:2060 [A] ✔
1F:67 [GLN] 1A:2455 [C] e:62 [GLN] a:2443 [C] ✔
1F:67 [GLN] 1A:2456 [G] e:62 [GLN] a:2444 [G] ✔
1F:55 [GLY] 1A:848 [G] e:50 [ALA] a:801 [G] ✔
1F:45 [ARG] 1A:469 [A] e:40 [ARG] a:443 [A] ✔
1F:45 [ARG] 1A:470 [C] e:40 [ARG] a:444 [C] ✔
1F:45 [ARG] 1A:1292 [A] e:40 [ARG] a:1246 [A] ✔
1F:54 [ARG] 1A:720 [C] e:49 [ARG] a:673 [C] ✔
1F:54 [ARG] 1A:721 [G] e:49 [ARG] a:674 [G] ✔
1F:54 [ARG] 1A:848 [G] e:49 [ARG] a:801 [G] ✔
1F:58 [ALA] 1A:477 [C] e:53 [THR] a:451 [U] ✔
1F:58 [ALA] 1A:478 [G] e:53 [THR] a:452 [G] ✔
1F:58 [ALA] 1A:484 [G] e:53 [THR] a:458 [G] ✔
1F:58 [ALA] 1A:495 [G] e:53 [THR] a:469 [G] ✔
1F:68 [LYS] 1A:2081 [A] e:63 [LYS] a:2059 [A] ✔
1F:68 [LYS] 1A:2082 [A] e:63 [LYS] a:2060 [A] ✔
1F:68 [LYS] 1A:2083 [G] e:63 [LYS] a:2061 [G] ✔
1F:68 [LYS] 1A:2084 [A] e:63 [LYS] a:2062 [A] ✔
1F:68 [LYS] 1A:2455 [C] e:63 [LYS] a:2443 [C] ✔
1F:68 [LYS] 1A:2456 [G] e:63 [LYS] a:2444 [G] ✔
1F:101 [LEU] 1A:630 [U] e:96 [VAL] a:607 [U] ✔
1F:101 [LEU] 1A:706 [C] e:96 [VAL] a:659 [G] ✔
1F:89 [VAL] 1A:609 [A] e:84 [THR] a:586 [A] ✔
1F:89 [VAL] 1A:719 [C] e:84 [THR] a:672 [C] ✔
1F:70 [THR] 1A:2081 [A] e:65 [THR] a:2059 [A] ✔
1F:70 [THR] 1A:2082 [A] e:65 [THR] a:2060 [A] ✔
1F:29 [ASN] 1A:622 [G] e:24 [ASN] a:599 [A] ✔
1F:29 [ASN] 1A:623 [G] e:24 [ASN] a:600 [G] ✔
1F:81 [PRO] 1A:608 [G] e:76 [PRO] a:585 [G] ✔
1F:81 [PRO] 1A:719 [C] e:76 [PRO] a:672 [C] ✔
1F:81 [PRO] 1A:720 [C] e:76 [PRO] a:673 [C] ✔
1F:56 [GLU] 1A:478 [G] e:51 [GLU] a:452 [G] ✔
1F:77 [ASP] 1A:721 [G] e:72 [SER] a:674 [G] ✔
1F:50 [SER] 1A:37 [C] e:45 [ALA] a:37 [C] ✔
1F:50 [SER] 1A:38 [A] e:45 [ALA] a:38 [A] ✔
1F:50 [SER] 1A:476 [G] e:45 [ALA] a:450 [G] ✔
1F:50 [SER] 1A:477 [C] e:45 [ALA] a:451 [U] ✔
1F:34 [TRP] 1A:1290 [G] e:29 [HIS] a:1244 [A] ✔
1F:34 [TRP] 1A:1291 [G] e:29 [HIS] a:1245 [G] ✔
1F:40 [GLN] 1A:640 [A] e:35 [TYR] a:615 [U] ✔
1F:61 [GLY] 1A:845 [G] e:56 [GLY] a:798 [G] ✔
1F:32 [LEU] 1A:622 [G] e:27 [LEU] a:599 [A] ✔
1F:32 [LEU] 1A:623 [G] e:27 [LEU] a:600 [G] ✔
1F:100 [THR] 1A:630 [U] e:95 [LYS] a:607 [U] ✔
1F:100 [THR] 1A:705 [C] e:95 [LYS] a:658 [U] ✔
1F:100 [THR] 1A:706 [C] e:95 [LYS] a:659 [G] ✔
1F:65 [TRP] 1A:1303 [C] e:60 [TRP] a:1257 [C] ✔
1F:105 [VAL] 1A:622 [G] e:100 [MET] a:599 [A] ✔
1F:105 [VAL] 1A:623 [G] e:100 [MET] a:600 [G] ✔
1F:38 [ARG] 1A:1291 [G] e:33 [VAL] a:1245 [G] ✔
1F:165 [ARG] 1A:345 [G] e:159 [LEU] a:321 [U] ✔
1F:165 [ARG] 1A:346 [A] e:159 [LEU] a:322 [A] ✔
1F:57 [VAL] 1A:478 [G] e:52 [VAL] a:452 [G] ✔
1F:62 [ARG] 1A:843 [C] e:57 [LYS] a:796 [C] ✔
1F:62 [ARG] 1A:844 [C] e:57 [LYS] a:797 [G] ✔
1F:62 [ARG] 1A:845 [G] e:57 [LYS] a:798 [G] ✔
1F:95 [ARG] 1A:612 [C] e:90 [GLN] a:589 [U] ✔
1F:95 [ARG] 1A:613 [A] e:90 [GLN] a:590 [A] ✔
1F:135 [LYS] 1A:344 [A] e:130 [LYS] a:320 [A] ✔
1F:135 [LYS] 1A:345 [G] e:130 [LYS] a:321 [U] ✔
1F:106 [ARG] 1A:642 [G] e:101 [TYR] a:617 [G] ✔
1F:171 [PRO] 1A:347 [G] e:165 [HIS] a:323 [C] ✔
1F:171 [PRO] 1A:1250 [U] e:165 [HIS] a:1205 [A] ✔
1F:205 [ARG] 1A:641 [G] e:199 [MET] a:616 [A] ✔
1F:205 [ARG] 1A:642 [G] e:199 [MET] a:617 [G] ✔
1F:47 [GLY] 1A:469 [A] e:42 [GLY] a:443 [A] ✔
1F:47 [GLY] 1A:470 [C] e:42 [GLY] a:444 [C] ✔
1F:49 [ALA] 1A:38 [A] e:44 [ARG] a:38 [A] ✔
1F:49 [ALA] 1A:468 [G] e:44 [ARG] a:442 [G] ✔
1F:49 [ALA] 1A:470 [C] e:44 [ARG] a:444 [C] ✔
1F:63 [LYS] 1A:721 [G] e:58 [LYS] a:674 [G] ✔
1F:63 [LYS] 1A:722 [A] e:58 [LYS] a:675 [A] ✔
1F:63 [LYS] 1A:723 [A] e:58 [LYS] a:676 [A] ✔
1F:94 [PRO] 1A:38 [A] e:89 [PRO] a:38 [A] ✔
1F:94 [PRO] 1A:39 [C] e:89 [PRO] a:39 [G] ✔
1F:137 [LYS] 1A:344 [A] e:132 [LYS] a:320 [A] ✔
1F:137 [LYS] 1A:345 [G] e:132 [LYS] a:321 [U] ✔
1F:90 [PHE] 1A:610 [C] e:85 [PHE] a:587 [C] ✔
1F:90 [PHE] 1A:611 [U] e:85 [PHE] a:588 [U] ✔
1F:90 [PHE] 1A:716 [G] e:85 [PHE] a:669 [G] ✔
1F:90 [PHE] 1A:718 [C] e:85 [PHE] a:671 [C] ✔
1F:90 [PHE] 1A:719 [C] e:85 [PHE] a:672 [C] ✔
1F:103 [LYS] 1A:630 [U] e:98 [LYS] a:607 [U] ✔
1F:103 [LYS] 1A:643 [C] e:98 [LYS] a:618 [G] ✔
1F:103 [LYS] 1A:644 [G] e:98 [LYS] a:619 [G] ✔
1F:103 [LYS] 1A:645 [G] e:98 [LYS] a:620 [G] ✔
1F:102 [PRO] 1A:629 [U] e:97 [ASN] a:606 [U] ✔
1F:102 [PRO] 1A:630 [U] e:97 [ASN] a:607 [U] ✔
1F:102 [PRO] 1A:705 [C] e:97 [ASN] a:658 [U] ✔
1F:102 [PRO] 1A:706 [C] e:97 [ASN] a:659 [G] ✔
1F:35 [GLU] 1A:622 [G] e:30 [GLN] a:599 [A] ✔
1F:35 [GLU] 1A:706 [C] e:30 [GLN] a:659 [G] ✔
1F:35 [GLU] 1A:707 [G] e:30 [GLN] a:660 [C] ✔
1F:78 [ILE] 1A:495 [G] e:73 [ILE] a:469 [G] ✔
1F:51 [THR] 1A:37 [C] e:46 [GLN] a:37 [C] ✔
1F:51 [THR] 1A:476 [G] e:46 [GLN] a:450 [G] ✔
1F:51 [THR] 1A:477 [C] e:46 [GLN] a:451 [U] ✔
1F:51 [THR] 1A:1294 [G] e:46 [GLN] a:1248 [G] ✔
1F:179 [GLU] 1A:641 [G] e:173 [THR] a:616 [A] ✔
1F:76 [GLY] 1A:721 [G] e:71 [GLY] a:674 [G] ✔
1F:76 [GLY] 1A:722 [A] e:71 [GLY] a:675 [A] ✔
1F:46 [ARG] 1A:38 [A] e:41 [GLN] a:38 [A] ✔
1F:46 [ARG] 1A:39 [C] e:41 [GLN] a:39 [G] ✔
1F:46 [ARG] 1A:467 [U] e:41 [GLN] a:441 [U] ✔
1F:46 [ARG] 1A:468 [G] e:41 [GLN] a:442 [G] ✔
1F:46 [ARG] 1A:469 [A] e:41 [GLN] a:443 [A] ✔
1F:31 [HIS] 1A:622 [G] e:26 [ALA] a:599 [A] ✔
1F:107 [LYS] 1A:642 [G] e:102 [ARG] a:617 [G] ✔
1F:52 [LYS] 1A:37 [C] e:47 [LYS] a:37 [C] ✔
1F:52 [LYS] 1A:477 [C] e:47 [LYS] a:451 [U] ✔
1F:52 [LYS] 1A:478 [G] e:47 [LYS] a:452 [G] ✔
1F:86 [GLY] 1A:475 [A] e:81 [GLY] a:449 [A] ✔
1F:86 [GLY] 1A:476 [G] e:81 [GLY] a:450 [G] ✔
1F:72 [ARG] 1A:1301 [U] e:67 [ARG] a:1255 [U] ✔
1F:72 [ARG] 1A:1302 [G] e:67 [ARG] a:1256 [G] ✔
1F:72 [ARG] 1A:1303 [C] e:67 [ARG] a:1257 [C] ✔
1F:72 [ARG] 1A:1304 [C] e:67 [ARG] a:1258 [U] ✔
1F:72 [ARG] 1A:2082 [A] e:67 [ARG] a:2060 [A] ✔
1F:169 [ASN] 1A:348 [A] e:163 [ASN] a:324 [A] ❌ 7K00_e_a
1F:39 [TRP] 1A:641 [G] e:34 [ALA] a:616 [A] ❌ 7K00_e_a
1F:39 [TRP] 1A:642 [G] e:34 [ALA] a:617 [G] ❌ 7K00_e_a
1F:84 [VAL] 1A:607 [C] e:79 [ARG] a:584 [C] ❌ 7K00_e_a
1F:59 [TYR] 1A:478 [G] e:54 [GLY] a:452 [G] ❌ 7K00_e_a
1F:59 [TYR] 1A:496 [A] e:54 [GLY] a:470 [A] ❌ 7K00_e_a
1F:97 [TYR] 1A:1292 [A] e:92 [HIS] a:1246 [A] ❌ 7K00_e_a
1F:97 [TYR] 1A:1293 [A] e:92 [HIS] a:1247 [A] ❌ 7K00_e_a
1F:43 [LYS] 1A:641 [G] e:38 [GLY] a:616 [A] ❌ 7K00_e_a
1F:168 [ARG] 1A:1250 [U] e:162 [ARG] a:1205 [A] ❌ 7K00_e_a
1F:60 [SER] 1A:843 [C] e:55 [SER] a:796 [C] ❌ 7K00_e_a
1F:85 [GLY] 1A:478 [G] e:80 [SER] a:452 [G] ❌ 7K00_e_a
1F:69 [HIS] 1A:2084 [A] e:64 [GLY] a:2062 [A] ❌ 7K00_e_a
1F:69 [HIS] 1A:2455 [C] e:64 [GLY] a:2443 [C] ❌ 7K00_e_a
1F:83 [PHE] 1A:607 [C] e:78 [TRP] a:584 [C] ❌ 7K00_e_a
1F:83 [PHE] 1A:1304 [C] e:78 [TRP] a:1258 [U] ❌ 7K00_e_a
1F:170 [LEU] 1A:1250 [U] e:164 [LEU] a:1205 [A] ❌ 7K00_e_a
1F:75 [HIS] 1A:720 [C] e:70 [SER] a:673 [C] ❌ 7K00_e_a
1F:75 [HIS] 1A:1302 [G] e:70 [SER] a:1256 [G] ❌ 7K00_e_a
1F:75 [HIS] 1A:1303 [C] e:70 [SER] a:1257 [C] ❌ 7K00_e_a
1F:48 [THR] 1A:37 [C] e:43 [THR] a:37 [C] ❌ 7K00_e_a
1F:99 [TYR] 1A:706 [C] e:94 [GLN] a:659 [G] ❌ 7K00_e_a
1F:89 [VAL] 1A:718 [C] e:84 [THR] a:671 [C] ❌ 7K00_e_a
1F:81 [PRO] 1A:607 [C] e:76 [PRO] a:584 [C] ❌ 7K00_e_a
1F:177 [ALA] 1A:640 [A] e:171 [ASP] a:615 [U] ❌ 7K00_e_a
1F:50 [SER] 1A:470 [C] e:45 [ALA] a:444 [C] ❌ 7K00_e_a
1F:50 [SER] 1A:1294 [G] e:45 [ALA] a:1248 [G] ❌ 7K00_e_a
1F:34 [TRP] 1A:707 [G] e:29 [HIS] a:660 [C] ❌ 7K00_e_a
1F:40 [GLN] 1A:641 [G] e:35 [TYR] a:616 [A] ❌ 7K00_e_a
1F:61 [GLY] 1A:844 [C] e:56 [GLY] a:797 [G] ❌ 7K00_e_a
1F:38 [ARG] 1A:469 [A] e:33 [VAL] a:443 [A] ❌ 7K00_e_a
1F:38 [ARG] 1A:707 [G] e:33 [VAL] a:660 [C] ❌ 7K00_e_a
1F:38 [ARG] 1A:708 [C] e:33 [VAL] a:661 [A] ❌ 7K00_e_a
1F:38 [ARG] 1A:1292 [A] e:33 [VAL] a:1246 [A] ❌ 7K00_e_a
1F:62 [ARG] 1A:494 [G] e:57 [LYS] a:468 [G] ❌ 7K00_e_a
1F:95 [ARG] 1A:1292 [A] e:90 [GLN] a:1246 [A] ❌ 7K00_e_a
1F:95 [ARG] 1A:1293 [A] e:90 [GLN] a:1247 [A] ❌ 7K00_e_a
1F:135 [LYS] 1A:343 [C] e:130 [LYS] a:319 [G] ❌ 7K00_e_a
1F:106 [ARG] 1A:630 [U] e:101 [TYR] a:607 [U] ❌ 7K00_e_a
1F:171 [PRO] 1A:344 [A] e:165 [HIS] a:320 [A] ❌ 7K00_e_a
1F:47 [GLY] 1A:38 [A] e:42 [GLY] a:38 [A] ❌ 7K00_e_a
1F:90 [PHE] 1A:1294 [G] e:85 [PHE] a:1248 [G] ❌ 7K00_e_a
1F:102 [PRO] 1A:622 [G] e:97 [ASN] a:599 [A] ❌ 7K00_e_a
1F:179 [GLU] 1A:640 [A] e:173 [THR] a:615 [U] ❌ 7K00_e_a
1F:52 [LYS] 1A:38 [A] e:47 [LYS] a:38 [A] ❌ 7K00_e_a
1F:105 [VAL] 1A:706 [C] e:100 [MET] a:659 [G] ❌ 4Y4O_1F_1A
1F:105 [VAL] 1A:705 [C] e:100 [MET] a:658 [U] ❌ 4Y4O_1F_1A
1F:106 [ARG] 1A:640 [A] e:101 [TYR] a:615 [U] ❌ 4Y4O_1F_1A
1F:106 [ARG] 1A:641 [G] e:101 [TYR] a:616 [A] ❌ 4Y4O_1F_1A
1F:107 [LYS] 1A:643 [C] e:102 [ARG] a:618 [G] ❌ 4Y4O_1F_1A
1F:137 [LYS] 1A:343 [C] e:132 [LYS] a:319 [G] ❌ 4Y4O_1F_1A
1F:168 [ARG] 1A:348 [A] e:162 [ARG] a:324 [A] ❌ 4Y4O_1F_1A
1F:169 [ASN] 1A:343 [C] e:163 [ASN] a:319 [G] ❌ 4Y4O_1F_1A
1F:179 [GLU] 1A:637 [U] e:173 [THR] a:614 [A] ❌ 4Y4O_1F_1A
1F:38 [ARG] 1A:1290 [G] e:33 [VAL] a:1244 [A] ❌ 4Y4O_1F_1A
1F:39 [TRP] 1A:640 [A] e:34 [ALA] a:615 [U] ❌ 4Y4O_1F_1A
1F:41 [LEU] 1A:640 [A] e:36 [ALA] a:615 [U] ❌ 4Y4O_1F_1A
1F:43 [LYS] 1A:640 [A] e:38 [GLY] a:615 [U] ❌ 4Y4O_1F_1A
1F:44 [ARG] 1A:640 [A] e:39 [ALA] a:615 [U] ❌ 4Y4O_1F_1A
1F:47 [GLY] 1A:468 [G] e:42 [GLY] a:442 [G] ❌ 4Y4O_1F_1A
1F:48 [THR] 1A:467 [U] e:43 [THR] a:441 [U] ❌ 4Y4O_1F_1A
1F:49 [ALA] 1A:37 [C] e:44 [ARG] a:37 [C] ❌ 4Y4O_1F_1A
1F:49 [ALA] 1A:1293 [A] e:44 [ARG] a:1247 [A] ❌ 4Y4O_1F_1A
1F:49 [ALA] 1A:1294 [G] e:44 [ARG] a:1248 [G] ❌ 4Y4O_1F_1A
1F:51 [THR] 1A:470 [C] e:46 [GLN] a:444 [C] ❌ 4Y4O_1F_1A
1F:54 [ARG] 1A:719 [C] e:49 [ARG] a:672 [C] ❌ 4Y4O_1F_1A
1F:71 [GLY] 1A:1302 [G] e:66 [GLY] a:1256 [G] ❌ 4Y4O_1F_1A
1F:76 [GLY] 1A:720 [C] e:71 [GLY] a:673 [C] ❌ 4Y4O_1F_1A
1F:82 [ILE] 1A:719 [C] e:77 [ILE] a:672 [C] ❌ 4Y4O_1F_1A
1F:83 [PHE] 1A:1302 [G] e:78 [TRP] a:1256 [G] ❌ 4Y4O_1F_1A
1F:84 [VAL] 1A:496 [A] e:79 [ARG] a:470 [A] ❌ 4Y4O_1F_1A
1F:88 [VAL] 1A:475 [A] e:83 [VAL] a:449 [A] ❌ 4Y4O_1F_1A
1F:89 [VAL] 1A:608 [G] e:84 [THR] a:585 [G] ❌ 4Y4O_1F_1A
1F:89 [VAL] 1A:848 [G] e:84 [THR] a:801 [G] ❌ 4Y4O_1F_1A
1F:89 [VAL] 1A:716 [G] e:84 [THR] a:669 [G] ❌ 4Y4O_1F_1A
1F:90 [PHE] 1A:609 [A] e:85 [PHE] a:586 [A] ❌ 4Y4O_1F_1A
1F:99 [TYR] 1A:708 [C] e:94 [GLN] a:661 [A] ❌ 4Y4O_1F_1A
1F:100 [THR] 1A:707 [G] e:95 [LYS] a:660 [C] ❌ 4Y4O_1F_1A
1F:100 [THR] 1A:629 [U] e:95 [LYS] a:606 [U] ❌ 4Y4O_1F_1A
1F:102 [PRO] 1A:623 [G] e:97 [ASN] a:600 [G] ❌ 4Y4O_1F_1A
1F:103 [LYS] 1A:642 [G] e:98 [LYS] a:617 [G] ❌ 4Y4O_1F_1A
1F:66 [PRO] 1A:837 [C] e:61 [ARG] a:790 [U] ❌ 7K00_e:61, 7K00_a:790 no longer at interface
1F:41 [LEU] 1A:1247 [C] e:36 [ALA] a:1202 [G] ❌ 7K00_a:1202 no longer at interface
1F:84 [VAL] 1A:606 [G] e:79 [ARG] a:583 [G] ❌ 7K00_a:583 no longer at interface
1F:44 [ARG] 1A:1247 [C] e:39 [ALA] a:1202 [G] ❌ 7K00_a:1202 no longer at interface
1F:188 [ARG] 1A:1248 [G] e:182 [ALA] a:1203 [U] ❌ 7K00_e:182, 7K00_a:1203 no longer at interface
1F:184 [TYR] 1A:1247 [C] e:178 [VAL] a:1202 [G] ❌ 7K00_e:178, 7K00_a:1202 no longer at interface
1F:184 [TYR] 1A:1248 [G] e:178 [VAL] a:1203 [U] ❌ 7K00_e:178, 7K00_a:1203 no longer at interface
1F:100 [THR] 1A:631 [A] e:95 [LYS] a:608 [A] ❌ 7K00_a:608 no longer at interface
1F:90 [PHE] 1A:717 [A] e:85 [PHE] a:670 [A] ❌ 7K00_a:670 no longer at interface
1F:35 [GLU] 1A:621 [G] e:30 [GLN] a:598 [U] ❌ 7K00_a:598 no longer at interface
1F:46 [ARG] 1A:466 [G] e:41 [GLN] a:440 [C] ❌ 7K00_a:440 no longer at interface
1F:31 [HIS] 1A:621 [G] e:26 [ALA] a:598 [U] ❌ 7K00_a:598 no longer at interface
1F:177 [ALA] 1A:636 [G] e:171 [ASP] a:613 [A] ❌ 4Y4O_1A:636 no longer at interface
1F:179 [GLU] 1A:636 [G] e:173 [THR] a:613 [A] ❌ 4Y4O_1A:636 no longer at interface
1F:62 [ARG] 1A:842 [C] e:57 [LYS] a:795 [C] ❌ 4Y4O_1A:842 no longer at interface
1F:84 [VAL] 1A:497 [A] e:79 [ARG] a:471 [A] ❌ 4Y4O_1A:497 no longer at interface
1F:84 [VAL] 1A:498 [A] e:79 [ARG] a:472 [A] ❌ 4Y4O_1A:498 no longer at interface
1F:85 [GLY] 1A:497 [A] e:80 [SER] a:471 [A] ❌ 4Y4O_1A:497 no longer at interface
1F:176 [LEU] 1A:640 [A] e:170 [ARG] a:615 [U] ❌ 7K00_e:170 no longer at interface
1F:185 [ASP] 1A:640 [A] e:179 [SER] a:615 [U] ❌ 7K00_e:179 no longer at interface
1F:91 [GLY] 1A:1294 [G] e:86 [ALA] a:1248 [G] ❌ 7K00_e:86 no longer at interface
1F:182 [ASN] 1A:640 [A] e:176 [ASP] a:615 [U] ❌ 7K00_e:176 no longer at interface
1F:182 [ASN] 1A:641 [G] e:176 [ASP] a:616 [A] ❌ 7K00_e:176 no longer at interface
1F:181 [LEU] 1A:641 [G] e:175 [ILE] a:616 [A] ❌ 7K00_e:175 no longer at interface
1F:92 [PRO] 1A:1294 [G] e:87 [ALA] a:1248 [G] ❌ 7K00_e:87 no longer at interface
1F:180 [GLY] 1A:640 [A] e:174 [GLY] a:615 [U] ❌ 7K00_e:174 no longer at interface
1F:180 [GLY] 1A:641 [G] e:174 [GLY] a:616 [A] ❌ 7K00_e:174 no longer at interface
1F:108 [LYS] 1A:623 [G] e:103 [GLY] a:600 [G] ❌ 7K00_e:103 no longer at interface
1F:108 [LYS] 1A:624 [C] e:103 [GLY] a:601 [C] ❌ 7K00_e:103 no longer at interface
1F:172 [TRP] 1A:1250 [U] e:166 [LYS] a:1205 [A] ❌ 4Y4O_1F:172 no longer at interface
1F:26 [ALA] 1A:624 [C] e:21 [ARG] a:601 [C] ❌ 4Y4O_1F:26 no longer at interface
1F:79 [GLY] 1A:848 [G] e:74 [LYS] a:801 [G] ❌ 4Y4O_1F:79 no longer at interface

logo_download Export the table of contacts

Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
Ribosomal protein L4 Bacterial large subunit ribosomal RNA 0.96 1.16 0.47 0.91 0.96 0.96 0.95 0.77 0.68 0.53 0.28


Other pairs involving 4Y4O_1F_1A or 7K00_e_a

Total number of entries: 17

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1VQ8_C_0 7K00_e_a 0.64 0.91 2.39 0.2 Ribosomal protein L4 compare
1VQ8_C_0 4Y4O_1F_1A 0.65 0.92 2.06 0.24 Ribosomal protein L4 compare
1YHQ_C_0 7K00_e_a 0.65 0.91 2.39 0.2 Ribosomal protein L4 compare
1YHQ_C_0 4Y4O_1F_1A 0.65 0.92 2.09 0.24 Ribosomal protein L4 compare
3CC2_C_0 7K00_e_a 0.65 0.91 2.38 0.2 Ribosomal protein L4 compare
3CC2_C_0 4Y4O_1F_1A 0.66 0.92 2.07 0.24 Ribosomal protein L4 compare
4Y4O_1F_1A 7O7Y_BC_B5,B8 0.58 0.9 2.36 0.2 Ribosomal protein L4 compare
4Y4O_1F_1A 6AZ3_C_1,7 0.58 0.63 2.26 0.16 compare
4Y4O_1F_1A 7RYG_E_A 0.74 0.96 1.8 0.47 Ribosomal protein L4 Bacterial large subunit ribosomal RNA compare
4Y4O_1F_1A 7OF0_F_A 0.80 0.94 1.15 0.47 Ribosomal protein L4 Bacterial large subunit ribosomal RNA compare
4Y4O_1F_1A 7K00_e_a 0.77 0.96 1.16 0.47 Ribosomal protein L4 Bacterial large subunit ribosomal RNA compare
4Y4O_1F_1A 6S0Z_E_A 0.78 0.97 1.43 0.53 Ribosomal protein L4 Bacterial large subunit ribosomal RNA compare
6AZ3_C_1,7 7K00_e_a 0.61 0.62 2.19 0.2 compare
6S0Z_E_A 7K00_e_a 0.81 0.98 1.41 0.49 Ribosomal protein L4 Bacterial large subunit ribosomal RNA compare
7K00_e_a 7RYG_E_A 0.93 0.99 1.56 0.77 Ribosomal protein L4 Bacterial large subunit ribosomal RNA compare
7K00_e_a 7O7Y_BC_B5,B8 0.58 0.9 2.31 0.22 Ribosomal protein L4 compare
7K00_e_a 7OF0_F_A 0.76 0.91 1.05 0.41 Ribosomal protein L4 Bacterial large subunit ribosomal RNA compare