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All interfaces > All interologs > Interface groups > group141 > 1A9N_B_Q vs 6DCL_A_D

Interface analysis


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Common contacts -

1A9N_B
1A9N_Q
6DCL_A
6DCL_D
Conserved?
B:13 [TYR] Q:9 [G] A:108 [PHE] D:9 [A] ✔
B:15 [ASN] Q:8 [U] A:110 [GLY] D:8 [U] ✔
B:87 [ALA] Q:10 [C] A:180 [ALA] D:10 [G] ✔
B:88 [LYS] Q:10 [C] A:181 [LEU] D:10 [G] ✔
B:83 [ARG] Q:8 [U] A:176 [GLU] D:8 [U] ✔
B:54 [GLN] Q:9 [G] A:148 [PHE] D:9 [A] ✔
B:54 [GLN] Q:10 [C] A:148 [PHE] D:10 [G] ✔
B:46 [LEU] Q:11 [A] A:137 [MET] D:11 [C] ✔
B:16 [ASN] Q:8 [U] A:111 [GLY] D:8 [U] ✔
B:56 [PHE] Q:10 [C] A:150 [PHE] D:10 [G] ✔
B:52 [ARG] Q:9 [G] A:146 [ARG] D:9 [A] ✔
B:89 [THR] Q:10 [C] A:182 [SER] D:10 [G] ✔
B:13 [TYR] Q:10 [C] A:108 [PHE] D:10 [G] ❌ 6DCL_A_D
B:15 [ASN] Q:9 [G] A:110 [GLY] D:9 [A] ❌ 6DCL_A_D
B:87 [ALA] Q:11 [A] A:180 [ALA] D:11 [C] ❌ 6DCL_A_D
B:11 [THR] Q:11 [A] A:106 [LYS] D:11 [C] ❌ 6DCL_A_D
B:53 [GLY] Q:9 [G] A:147 [GLY] D:9 [A] ❌ 6DCL_A_D
B:44 [VAL] Q:11 [A] A:135 [GLU] D:11 [C] ❌ 6DCL_A_D
B:17 [MET] Q:9 [G] A:112 [ILE] D:9 [A] ❌ 6DCL_A_D
B:51 [MET] Q:9 [G] A:145 [LYS] D:9 [A] ❌ 6DCL_A_D
B:51 [MET] Q:10 [C] A:145 [LYS] D:10 [G] ❌ 6DCL_A_D
B:51 [MET] Q:11 [A] A:145 [LYS] D:11 [C] ❌ 6DCL_A_D
B:19 [ASP] Q:9 [G] A:114 [GLU] D:9 [A] ❌ 6DCL_A_D
B:86 [TYR] Q:10 [C] A:179 [LYS] D:10 [G] ❌ 6DCL_A_D
B:85 [GLN] Q:10 [C] A:178 [ARG] D:10 [G] ❌ 6DCL_A_D
B:16 [ASN] Q:9 [G] A:111 [GLY] D:9 [A] ❌ 6DCL_A_D
B:56 [PHE] Q:11 [A] A:150 [PHE] D:11 [C] ❌ 6DCL_A_D
B:89 [THR] Q:11 [A] A:182 [SER] D:11 [C] ❌ 6DCL_A_D
B:50 [LYS] Q:9 [G] A:144 [LYS] D:9 [A] ❌ 6DCL_A_D
B:50 [LYS] Q:11 [A] A:144 [LYS] D:11 [C] ❌ 6DCL_A_D
B:11 [THR] Q:10 [C] A:106 [LYS] D:10 [G] ❌ 1A9N_B_Q
B:13 [TYR] Q:8 [U] A:108 [PHE] D:8 [U] ❌ 1A9N_B_Q
B:17 [MET] Q:8 [U] A:112 [ILE] D:8 [U] ❌ 1A9N_B_Q
B:44 [VAL] Q:10 [C] A:135 [GLU] D:10 [G] ❌ 1A9N_B_Q
B:46 [LEU] Q:10 [C] A:137 [MET] D:10 [G] ❌ 1A9N_B_Q
B:52 [ARG] Q:11 [A] A:146 [ARG] D:11 [C] ❌ 1A9N_B_Q
B:52 [ARG] Q:8 [U] A:146 [ARG] D:8 [U] ❌ 1A9N_B_Q
B:52 [ARG] Q:10 [C] A:146 [ARG] D:10 [G] ❌ 1A9N_B_Q
B:53 [GLY] Q:8 [U] A:147 [GLY] D:8 [U] ❌ 1A9N_B_Q
B:54 [GLN] Q:8 [U] A:148 [PHE] D:8 [U] ❌ 1A9N_B_Q
B:56 [PHE] Q:9 [G] A:150 [PHE] D:9 [A] ❌ 1A9N_B_Q
B:85 [GLN] Q:8 [U] A:178 [ARG] D:8 [U] ❌ 1A9N_B_Q
B:85 [GLN] Q:9 [G] A:178 [ARG] D:9 [A] ❌ 1A9N_B_Q
B:86 [TYR] Q:9 [G] A:179 [LYS] D:9 [A] ❌ 1A9N_B_Q
B:87 [ALA] Q:9 [G] A:180 [ALA] D:9 [A] ❌ 1A9N_B_Q
B:88 [LYS] Q:9 [G] A:181 [LEU] D:9 [A] ❌ 1A9N_B_Q
B:19 [ASP] Q:7 [U] A:114 [GLU] D:6 [A] ❌ 6DCL_D:6 no longer at interface
B:80 [LYS] Q:7 [U] A:173 [HIS] D:6 [A] ❌ 6DCL_A:173, 6DCL_D:6 no longer at interface
B:49 [MET] Q:7 [U] A:142 [SER] D:6 [A] ❌ 6DCL_A:142, 6DCL_D:6 no longer at interface
B:52 [ARG] Q:7 [U] A:146 [ARG] D:6 [A] ❌ 6DCL_D:6 no longer at interface
B:6 [ILE] Q:10 [C] A:99 [GLY] D:10 [G] ❌ 6DCL_A:99 no longer at interface
B:58 [ILE] Q:11 [A] A:152 [THR] D:11 [C] ❌ 6DCL_A:152 no longer at interface
B:80 [LYS] Q:8 [U] A:173 [HIS] D:8 [U] ❌ 6DCL_A:173 no longer at interface
B:49 [MET] Q:9 [G] A:142 [SER] D:9 [A] ❌ 6DCL_A:142 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
RNA-binding domain, RBD 0.6 2.71 0.20 0.71 0.05 0.87 0.8 0.32 0.26 0.10 0.19


Other pairs involving 1A9N_B_Q or 6DCL_A_D

Total number of entries: 26

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1URN_A_P 6DCL_A_D 0.33 0.61 1.95 0.17 RNA-binding domain, RBD compare
1A9N_B_Q 6F4G_B_C 0.94 0.92 0.25 0.79 RNA-binding domain, RBD compare
1A9N_B_Q 7DCO_R_G 0.79 0.68 2.58 0.17 compare
1A9N_B_Q 6SQN_A_X 0.92 0.87 0.86 0.6 RNA-binding domain, RBD compare
1A9N_B_Q 7DCO_4_G 0.43 0.58 1.31 0.17 RNA-binding domain, RBD compare
1A9N_B_Q 6DCL_A_D 0.32 0.6 2.71 0.2 RNA-binding domain, RBD compare
1A9N_B_Q 5WWE_A_B 0.72 0.6 2.34 0.2 RNA-binding domain, RBD compare
1A9N_B_Q 1SJ3_P_R 0.83 0.85 0.49 0.55 RNA-binding domain, RBD compare
1A9N_B_Q 1M5O_C_B 0.86 0.83 0.56 0.43 RNA-binding domain, RBD compare
1A9N_B_Q 1G2E_A_B 0.54 0.62 3.02 0.16 RNA-binding domain, RBD compare
1A9N_B_Q 6F4H_A_B 0.81 0.85 0.49 0.5 RNA-binding domain, RBD compare
1A9N_B_Q 4PR6_A_B 0.81 0.85 0.49 0.54 RNA-binding domain, RBD compare
1A9N_B_Q 7DCO_p_H 0.32 0.68 0.46 0.29 RNA-binding domain, RBD compare
1A9N_B_Q 7DCO_X_G 0.31 0.63 3.58 0.12 RNA-binding domain, RBD compare
1A9N_B_Q 2NZ4_A_P 0.79 0.83 0.54 0.5 RNA-binding domain, RBD compare
1A9N_B_Q 1URN_A_P 0.78 0.85 0.84 0.58 RNA-binding domain, RBD compare
1A9N_B_Q 1DRZ_A_B 0.81 0.85 0.47 0.5 RNA-binding domain, RBD compare
1A9N_B_Q 5DDP_D_A 0.81 0.82 0.42 0.46 RNA-binding domain, RBD compare
1A9N_B_Q 4ED5_A_D 0.54 0.62 2.45 0.1 RNA-binding domain, RBD compare
1A9N_B_Q 4PKD_B_V 0.75 0.85 0.6 0.5 RNA-binding domain, RBD compare
1A9N_B_Q 3MXH_P_R 0.79 0.78 1.0 0.46 RNA-binding domain, RBD compare
6CMN_A_D 6DCL_A_D 0.48 0.61 1.72 0.16 RNA-binding domain, RBD compare
6DCL_A_D 6F4H_A_B 0.33 0.63 1.94 0.17 RNA-binding domain, RBD compare
6DCL_A_D 6SQN_A_X 0.28 0.63 1.96 0.13 RNA-binding domain, RBD compare
6DCL_A_D 6XH2_A_D 0.48 0.6 1.96 0.14 RNA-binding domain, RBD compare
6DCL_A_D 6F4G_B_C 0.32 0.61 2.78 0.26 RNA-binding domain, RBD compare