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All interfaces > All interologs > Interface groups > group141 > 1A9N_B_Q vs 6F4G_B_C

Interface analysis


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Common contacts -

1A9N_B
1A9N_Q
6F4G_B
6F4G_C
Conserved?
B:23 [LYS] Q:13 [U] B:20 [LYS] C:16 [U] ✔
B:23 [LYS] Q:15 [C] B:20 [LYS] C:18 [C] ✔
B:23 [LYS] Q:16 [C] B:20 [LYS] C:19 [C] ✔
B:13 [TYR] Q:9 [G] B:10 [TYR] C:12 [G] ✔
B:13 [TYR] Q:10 [C] B:10 [TYR] C:13 [C] ✔
B:91 [SER] Q:11 [A] B:88 [SER] C:14 [A] ✔
B:91 [SER] Q:12 [G] B:88 [SER] C:15 [G] ✔
B:90 [ASP] Q:11 [A] B:87 [ASP] C:14 [A] ✔
B:90 [ASP] Q:12 [G] B:87 [ASP] C:15 [G] ✔
B:27 [LYS] Q:13 [U] B:24 [LYS] C:16 [U] ✔
B:15 [ASN] Q:8 [U] B:12 [ASN] C:11 [U] ✔
B:15 [ASN] Q:9 [G] B:12 [ASN] C:12 [G] ✔
B:43 [ILE] Q:13 [U] B:40 [ILE] C:16 [U] ✔
B:87 [ALA] Q:10 [C] B:84 [SER] C:13 [C] ✔
B:87 [ALA] Q:11 [A] B:84 [SER] C:14 [A] ✔
B:11 [THR] Q:11 [A] B:8 [THR] C:14 [A] ✔
B:88 [LYS] Q:10 [C] B:85 [LYS] C:13 [C] ✔
B:53 [GLY] Q:9 [G] B:50 [GLY] C:12 [G] ✔
B:44 [VAL] Q:11 [A] B:41 [VAL] C:14 [A] ✔
B:44 [VAL] Q:12 [G] B:41 [VAL] C:15 [G] ✔
B:44 [VAL] Q:13 [U] B:41 [VAL] C:16 [U] ✔
B:17 [MET] Q:9 [G] B:14 [LEU] C:12 [G] ✔
B:58 [ILE] Q:11 [A] B:55 [ILE] C:14 [A] ✔
B:83 [ARG] Q:8 [U] B:80 [GLN] C:11 [U] ✔
B:54 [GLN] Q:9 [G] B:51 [GLN] C:12 [G] ✔
B:54 [GLN] Q:10 [C] B:51 [GLN] C:13 [C] ✔
B:46 [LEU] Q:11 [A] B:43 [LEU] C:14 [A] ✔
B:46 [LEU] Q:12 [G] B:43 [LEU] C:15 [G] ✔
B:46 [LEU] Q:13 [U] B:43 [LEU] C:16 [U] ✔
B:51 [MET] Q:9 [G] B:48 [MET] C:12 [G] ✔
B:51 [MET] Q:10 [C] B:48 [MET] C:13 [C] ✔
B:51 [MET] Q:11 [A] B:48 [MET] C:14 [A] ✔
B:19 [ASP] Q:6 [A] B:16 [GLU] C:9 [A] ✔
B:19 [ASP] Q:7 [U] B:16 [GLU] C:10 [U] ✔
B:19 [ASP] Q:9 [G] B:16 [GLU] C:12 [G] ✔
B:86 [TYR] Q:10 [C] B:83 [TYR] C:13 [C] ✔
B:45 [ALA] Q:13 [U] B:42 [ALA] C:16 [U] ✔
B:85 [GLN] Q:10 [C] B:82 [ALA] C:13 [C] ✔
B:80 [LYS] Q:8 [U] B:77 [LYS] C:11 [U] ✔
B:47 [LYS] Q:16 [C] B:44 [LYS] C:19 [C] ✔
B:47 [LYS] Q:17 [U] B:44 [LYS] C:20 [G] ✔
B:20 [LYS] Q:4 [G] B:17 [LYS] C:7 [G] ✔
B:20 [LYS] Q:5 [U] B:17 [LYS] C:8 [U] ✔
B:20 [LYS] Q:6 [A] B:17 [LYS] C:9 [A] ✔
B:20 [LYS] Q:17 [U] B:17 [LYS] C:20 [G] ✔
B:20 [LYS] Q:18 [C] B:17 [LYS] C:21 [C] ✔
B:48 [THR] Q:16 [C] B:45 [THR] C:19 [C] ✔
B:16 [ASN] Q:8 [U] B:13 [ASN] C:11 [U] ✔
B:16 [ASN] Q:9 [G] B:13 [ASN] C:12 [G] ✔
B:49 [MET] Q:7 [U] B:46 [LEU] C:10 [U] ✔
B:49 [MET] Q:9 [G] B:46 [LEU] C:12 [G] ✔
B:56 [PHE] Q:10 [C] B:53 [PHE] C:13 [C] ✔
B:56 [PHE] Q:11 [A] B:53 [PHE] C:14 [A] ✔
B:92 [ASP] Q:11 [A] B:89 [ASP] C:14 [A] ✔
B:92 [ASP] Q:12 [G] B:89 [ASP] C:15 [G] ✔
B:52 [ARG] Q:7 [U] B:49 [ARG] C:10 [U] ✔
B:52 [ARG] Q:9 [G] B:49 [ARG] C:12 [G] ✔
B:52 [ARG] Q:16 [C] B:49 [ARG] C:19 [C] ✔
B:52 [ARG] Q:17 [U] B:49 [ARG] C:20 [G] ✔
B:89 [THR] Q:10 [C] B:86 [SER] C:13 [C] ✔
B:89 [THR] Q:11 [A] B:86 [SER] C:14 [A] ✔
B:89 [THR] Q:12 [G] B:86 [SER] C:15 [G] ✔
B:93 [ILE] Q:12 [G] B:90 [ILE] C:15 [G] ✔
B:50 [LYS] Q:9 [G] B:47 [LYS] C:12 [G] ✔
B:50 [LYS] Q:11 [A] B:47 [LYS] C:14 [A] ✔
B:80 [LYS] Q:7 [U] B:77 [LYS] C:10 [U] ❌ 6F4G_B_C
B:49 [MET] Q:6 [A] B:46 [LEU] C:9 [A] ❌ 6F4G_B_C
B:49 [MET] Q:17 [U] B:46 [LEU] C:20 [G] ❌ 6F4G_B_C
B:52 [ARG] Q:6 [A] B:49 [ARG] C:9 [A] ❌ 6F4G_B_C
B:50 [LYS] Q:10 [C] B:47 [LYS] C:13 [C] ❌ 1A9N_B_Q
B:22 [LYS] Q:0 [C] B:19 [LYS] C:2 [C] ❌ 6F4G_B:19, 6F4G_C:2 no longer at interface
B:22 [LYS] Q:1 [C] B:19 [LYS] C:3 [G] ❌ 6F4G_B:19, 6F4G_C:3 no longer at interface
B:6 [ILE] Q:10 [C] B:3 [MET] C:13 [C] ❌ 6F4G_B:3 no longer at interface
B:24 [GLU] Q:15 [C] B:21 [GLU] C:18 [C] ❌ 6F4G_B:21 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
RNA-binding domain, RBD 0.92 0.25 0.79 0.96 0.39 1.0 1.0 0.94 0.89 0.68 0.44


Other pairs involving 1A9N_B_Q or 6F4G_B_C

Total number of entries: 39

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1DRZ_A_B 6F4G_B_C 0.80 0.83 0.38 0.43 RNA-binding domain, RBD compare
6F4G_B_C 6F4H_A_B 0.81 0.87 0.36 0.5 RNA-binding domain, RBD compare
6F4G_B_C 7DCO_p_H 0.23 0.65 0.62 0.14 RNA-binding domain, RBD compare
6F4G_B_C 6SQN_A_X 0.91 0.87 0.39 0.6 RNA-binding domain, RBD compare
6F4G_B_C 7DCO_X_G 0.33 0.62 3.54 0.12 RNA-binding domain, RBD compare
6F4G_B_C 7DCO_R_G 0.76 0.68 2.57 0.14 compare
4ED5_A_D 6F4G_B_C 0.57 0.62 2.44 0.1 RNA-binding domain, RBD compare
1G2E_A_B 6F4G_B_C 0.57 0.61 3.03 0.15 RNA-binding domain, RBD compare
1URN_A_P 6F4G_B_C 0.78 0.85 0.36 0.58 RNA-binding domain, RBD compare
4PR6_A_B 6F4G_B_C 0.80 0.83 0.4 0.46 RNA-binding domain, RBD compare
3MXH_P_R 6F4G_B_C 0.80 0.77 0.94 0.46 RNA-binding domain, RBD compare
1A9N_B_Q 6F4G_B_C 0.94 0.92 0.25 0.79 RNA-binding domain, RBD compare
1A9N_B_Q 7DCO_R_G 0.79 0.68 2.58 0.17 compare
1A9N_B_Q 6SQN_A_X 0.92 0.87 0.86 0.6 RNA-binding domain, RBD compare
1A9N_B_Q 7DCO_4_G 0.43 0.58 1.31 0.17 RNA-binding domain, RBD compare
1A9N_B_Q 6DCL_A_D 0.32 0.6 2.71 0.2 RNA-binding domain, RBD compare
1A9N_B_Q 5WWE_A_B 0.72 0.6 2.34 0.2 RNA-binding domain, RBD compare
1A9N_B_Q 1SJ3_P_R 0.83 0.85 0.49 0.55 RNA-binding domain, RBD compare
1A9N_B_Q 1M5O_C_B 0.86 0.83 0.56 0.43 RNA-binding domain, RBD compare
1A9N_B_Q 1G2E_A_B 0.54 0.62 3.02 0.16 RNA-binding domain, RBD compare
1A9N_B_Q 6F4H_A_B 0.81 0.85 0.49 0.5 RNA-binding domain, RBD compare
1A9N_B_Q 4PR6_A_B 0.81 0.85 0.49 0.54 RNA-binding domain, RBD compare
1A9N_B_Q 7DCO_p_H 0.32 0.68 0.46 0.29 RNA-binding domain, RBD compare
1A9N_B_Q 7DCO_X_G 0.31 0.63 3.58 0.12 RNA-binding domain, RBD compare
1A9N_B_Q 2NZ4_A_P 0.79 0.83 0.54 0.5 RNA-binding domain, RBD compare
1A9N_B_Q 1URN_A_P 0.78 0.85 0.84 0.58 RNA-binding domain, RBD compare
1A9N_B_Q 1DRZ_A_B 0.81 0.85 0.47 0.5 RNA-binding domain, RBD compare
1A9N_B_Q 5DDP_D_A 0.81 0.82 0.42 0.46 RNA-binding domain, RBD compare
1A9N_B_Q 4ED5_A_D 0.54 0.62 2.45 0.1 RNA-binding domain, RBD compare
1A9N_B_Q 4PKD_B_V 0.75 0.85 0.6 0.5 RNA-binding domain, RBD compare
1A9N_B_Q 3MXH_P_R 0.79 0.78 1.0 0.46 RNA-binding domain, RBD compare
5TF6_A_B 6F4G_B_C 0.58 0.61 3.75 0.0 RNA-binding domain, RBD compare
1M5O_C_B 6F4G_B_C 0.81 0.81 0.4 0.5 RNA-binding domain, RBD compare
6DCL_A_D 6F4G_B_C 0.32 0.61 2.78 0.26 RNA-binding domain, RBD compare
4N0T_A_B 6F4G_B_C 0.58 0.61 3.62 0.0 RNA-binding domain, RBD compare
4PKD_B_V 6F4G_B_C 0.81 0.81 0.46 0.5 RNA-binding domain, RBD compare
2NZ4_A_P 6F4G_B_C 0.85 0.8 0.45 0.43 RNA-binding domain, RBD compare
1SJ3_P_R 6F4G_B_C 0.83 0.83 0.4 0.55 RNA-binding domain, RBD compare
5DDP_D_A 6F4G_B_C 0.82 0.81 0.36 0.46 RNA-binding domain, RBD compare