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All interfaces > All interologs > Interface groups > group141 > 1A9N_B_Q vs 7DCO_p_H

Interface analysis


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Common contacts -

1A9N_B
1A9N_Q
7DCO_p
7DCO_H
Conserved?
B:23 [LYS] Q:16 [C] p:41 [MET] H:1138 [G] ✔
B:22 [LYS] Q:0 [C] p:40 [ASN] H:1097 [G] ✔
B:22 [LYS] Q:1 [C] p:40 [ASN] H:1098 [C] ✔
B:51 [MET] Q:9 [G] p:68 [GLN] H:1106 [G] ✔
B:47 [LYS] Q:16 [C] p:64 [ASN] H:1138 [G] ✔
B:49 [MET] Q:9 [G] p:66 [LYS] H:1106 [G] ✔
B:52 [ARG] Q:6 [A] p:69 [ARG] H:1104 [U] ✔
B:52 [ARG] Q:9 [G] p:69 [ARG] H:1106 [G] ✔
B:50 [LYS] Q:9 [G] p:67 [LYS] H:1106 [G] ✔
B:20 [LYS] Q:6 [A] p:38 [LYS] H:1104 [U] ❌ 7DCO_p_H
B:49 [MET] Q:6 [A] p:66 [LYS] H:1104 [U] ❌ 7DCO_p_H
B:52 [ARG] Q:16 [C] p:69 [ARG] H:1138 [G] ❌ 7DCO_p_H
B:20 [LYS] Q:16 [C] p:38 [LYS] H:1138 [G] ❌ 1A9N_B_Q
B:44 [VAL] Q:12 [G] p:61 [VAL] H:1116 [A] ❌ 7DCO_p:61, 7DCO_H:1116 no longer at interface
B:46 [LEU] Q:12 [G] p:63 [MET] H:1116 [A] ❌ 7DCO_p:63, 7DCO_H:1116 no longer at interface
B:19 [ASP] Q:7 [U] p:37 [GLU] H:1105 [C] ❌ 7DCO_p:37, 7DCO_H:1105 no longer at interface
B:80 [LYS] Q:7 [U] p:97 [LYS] H:1105 [C] ❌ 7DCO_p:97, 7DCO_H:1105 no longer at interface
B:20 [LYS] Q:4 [G] p:38 [LYS] H:1101 [C] ❌ 7DCO_H:1101 no longer at interface
B:49 [MET] Q:7 [U] p:66 [LYS] H:1105 [C] ❌ 7DCO_H:1105 no longer at interface
B:52 [ARG] Q:7 [U] p:69 [ARG] H:1105 [C] ❌ 7DCO_H:1105 no longer at interface
B:20 [LYS] Q:3 [G] p:38 [LYS] H:1100 [A] ❌ 1A9N_Q:3 no longer at interface
B:13 [TYR] Q:9 [G] p:31 [TYR] H:1106 [G] ❌ 7DCO_p:31 no longer at interface
B:15 [ASN] Q:9 [G] p:33 [SER] H:1106 [G] ❌ 7DCO_p:33 no longer at interface
B:53 [GLY] Q:9 [G] p:70 [GLY] H:1106 [G] ❌ 7DCO_p:70 no longer at interface
B:17 [MET] Q:9 [G] p:35 [LEU] H:1106 [G] ❌ 7DCO_p:35 no longer at interface
B:54 [GLN] Q:9 [G] p:71 [GLN] H:1106 [G] ❌ 7DCO_p:71 no longer at interface
B:19 [ASP] Q:6 [A] p:37 [GLU] H:1104 [U] ❌ 7DCO_p:37 no longer at interface
B:19 [ASP] Q:9 [G] p:37 [GLU] H:1106 [G] ❌ 7DCO_p:37 no longer at interface
B:48 [THR] Q:16 [C] p:65 [PHE] H:1138 [G] ❌ 7DCO_p:65 no longer at interface
B:16 [ASN] Q:9 [G] p:34 [GLN] H:1106 [G] ❌ 7DCO_p:34 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
RNA-binding domain, RBD 0.68 0.46 0.29 0.98 0.25 1.0 0.71 0.32 0.10 0.00 0.81


Other pairs involving 1A9N_B_Q or 7DCO_p_H

Total number of entries: 21

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6F4G_B_C 7DCO_p_H 0.23 0.65 0.62 0.14 RNA-binding domain, RBD compare
1A9N_B_Q 6F4G_B_C 0.94 0.92 0.25 0.79 RNA-binding domain, RBD compare
1A9N_B_Q 7DCO_R_G 0.79 0.68 2.58 0.17 compare
1A9N_B_Q 6SQN_A_X 0.92 0.87 0.86 0.6 RNA-binding domain, RBD compare
1A9N_B_Q 7DCO_4_G 0.43 0.58 1.31 0.17 RNA-binding domain, RBD compare
1A9N_B_Q 6DCL_A_D 0.32 0.6 2.71 0.2 RNA-binding domain, RBD compare
1A9N_B_Q 5WWE_A_B 0.72 0.6 2.34 0.2 RNA-binding domain, RBD compare
1A9N_B_Q 1SJ3_P_R 0.83 0.85 0.49 0.55 RNA-binding domain, RBD compare
1A9N_B_Q 1M5O_C_B 0.86 0.83 0.56 0.43 RNA-binding domain, RBD compare
1A9N_B_Q 1G2E_A_B 0.54 0.62 3.02 0.16 RNA-binding domain, RBD compare
1A9N_B_Q 6F4H_A_B 0.81 0.85 0.49 0.5 RNA-binding domain, RBD compare
1A9N_B_Q 4PR6_A_B 0.81 0.85 0.49 0.54 RNA-binding domain, RBD compare
1A9N_B_Q 7DCO_p_H 0.32 0.68 0.46 0.29 RNA-binding domain, RBD compare
1A9N_B_Q 7DCO_X_G 0.31 0.63 3.58 0.12 RNA-binding domain, RBD compare
1A9N_B_Q 2NZ4_A_P 0.79 0.83 0.54 0.5 RNA-binding domain, RBD compare
1A9N_B_Q 1URN_A_P 0.78 0.85 0.84 0.58 RNA-binding domain, RBD compare
1A9N_B_Q 1DRZ_A_B 0.81 0.85 0.47 0.5 RNA-binding domain, RBD compare
1A9N_B_Q 5DDP_D_A 0.81 0.82 0.42 0.46 RNA-binding domain, RBD compare
1A9N_B_Q 4ED5_A_D 0.54 0.62 2.45 0.1 RNA-binding domain, RBD compare
1A9N_B_Q 4PKD_B_V 0.75 0.85 0.6 0.5 RNA-binding domain, RBD compare
1A9N_B_Q 3MXH_P_R 0.79 0.78 1.0 0.46 RNA-binding domain, RBD compare