Interface analysis
Style
Protein
CartoonLicorice
Surface
RNA
CartoonLicorice
Surface
Color
StructureStructure (with hetatm)
Chain
Chainbow
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Focus on
InterfaceRNA
Protein
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Show chains
Interface
show interface as licoriceCommon contacts -
1DRZ_A
|
1DRZ_B
|
7DCO_R
|
7DCO_G
|
Conserved?
|
---|---|---|---|---|
A:13 [TYR] | B:151 [G] | R:138 [TYR] | G:112 [U] | ✔ |
A:13 [TYR] | B:152 [C] | R:138 [TYR] | G:113 [U] | ✔ |
A:91 [SER] | B:153 [A] | R:230 [PRO] | G:114 [U] | ✔ |
A:51 [MSE] | B:151 [G] | R:179 [LYS] | G:112 [U] | ✔ |
A:51 [MSE] | B:152 [C] | R:179 [LYS] | G:113 [U] | ✔ |
A:15 [ASN] | B:151 [G] | R:140 [GLY] | G:112 [U] | ✔ |
A:90 [ASP] | B:153 [A] | R:229 [ASP] | G:114 [U] | ✔ |
A:87 [ALA] | B:152 [C] | R:226 [ALA] | G:113 [U] | ✔ |
A:87 [ALA] | B:153 [A] | R:226 [ALA] | G:114 [U] | ✔ |
A:11 [THR] | B:153 [A] | R:136 [THR] | G:114 [U] | ✔ |
A:88 [LYS] | B:152 [C] | R:227 [ASN] | G:113 [U] | ✔ |
A:88 [LYS] | B:153 [A] | R:227 [ASN] | G:114 [U] | ✔ |
A:83 [ARG] | B:150 [U] | R:222 [LEU] | G:111 [U] | ✔ |
A:54 [GLN] | B:151 [G] | R:181 [CYS] | G:112 [U] | ✔ |
A:54 [GLN] | B:152 [C] | R:181 [CYS] | G:113 [U] | ✔ |
A:86 [TYR] | B:152 [C] | R:225 [TRP] | G:113 [U] | ✔ |
A:85 [GLN] | B:152 [C] | R:224 [LYS] | G:113 [U] | ✔ |
A:16 [ASN] | B:150 [U] | R:141 [GLY] | G:111 [U] | ✔ |
A:16 [ASN] | B:151 [G] | R:141 [GLY] | G:112 [U] | ✔ |
A:44 [LEU] | B:153 [A] | R:174 [ARG] | G:114 [U] | ✔ |
A:56 [PHE] | B:152 [C] | R:183 [PHE] | G:113 [U] | ✔ |
A:56 [PHE] | B:153 [A] | R:183 [PHE] | G:114 [U] | ✔ |
A:52 [ARG] | B:151 [G] | R:180 [ASN] | G:112 [U] | ✔ |
A:89 [THR] | B:153 [A] | R:228 [GLU] | G:114 [U] | ✔ |
A:51 [MSE] | B:153 [A] | R:179 [LYS] | G:114 [U] | ❌ 7DCO_R_G |
A:15 [ASN] | B:150 [U] | R:140 [GLY] | G:111 [U] | ❌ 7DCO_R_G |
A:89 [THR] | B:152 [C] | R:228 [GLU] | G:113 [U] | ❌ 7DCO_R_G |
A:46 [SER] | B:153 [A] | R:176 [VAL] | G:114 [U] | ❌ 1DRZ_A_B |
A:48 [SER] | B:151 [G] | R:178 [SER] | G:112 [U] | ❌ 1DRZ_A_B |
A:83 [ARG] | B:151 [G] | R:222 [LEU] | G:112 [U] | ❌ 1DRZ_A_B |
A:85 [GLN] | B:151 [G] | R:224 [LYS] | G:112 [U] | ❌ 1DRZ_A_B |
A:19 [GLU] | B:149 [U] | R:148 [SER] | G:110 [U] | ❌ 7DCO_R:148, 7DCO_G:110 no longer at interface |
A:52 [ARG] | B:149 [U] | R:180 [ASN] | G:110 [U] | ❌ 7DCO_G:110 no longer at interface |
A:44 [LEU] | B:155 [U] | R:174 [ARG] | G:115 [U] | ❌ 1DRZ_B:155 no longer at interface |
A:46 [SER] | B:155 [U] | R:176 [VAL] | G:115 [U] | ❌ 1DRZ_B:155 no longer at interface |
A:91 [SER] | B:155 [U] | R:230 [PRO] | G:115 [U] | ❌ 1DRZ_B:155 no longer at interface |
A:19 [GLU] | B:150 [U] | R:148 [SER] | G:111 [U] | ❌ 7DCO_R:148 no longer at interface |
A:19 [GLU] | B:151 [G] | R:148 [SER] | G:112 [U] | ❌ 7DCO_R:148 no longer at interface |
A:17 [LEU] | B:151 [G] | R:142 [ILE] | G:112 [U] | ❌ 7DCO_R:142 no longer at interface |
A:6 [THR] | B:152 [C] | R:128 [GLY] | G:113 [U] | ❌ 7DCO_R:128 no longer at interface |
A:58 [ILE] | B:153 [A] | R:185 [LYS] | G:114 [U] | ❌ 7DCO_R:185 no longer at interface |
A:80 [LYS] | B:150 [U] | R:218 [GLY] | G:111 [U] | ❌ 7DCO_R:218 no longer at interface |
A:4 [PRO] | B:152 [C] | R:123 [ASP] | G:113 [U] | ❌ 1DRZ_A:4 no longer at interface |
A:5 [GLU] | B:152 [C] | R:124 [MET] | G:113 [U] | ❌ 1DRZ_A:5 no longer at interface |
A:18 [ASN] | B:150 [U] | R:143 [ASP] | G:111 [U] | ❌ 1DRZ_A:18 no longer at interface |
Properties of this pair
Common ECOD label(s) |
Common RFAM label(s) |
Interface TM-score |
Interface RMSD |
Percentage identity |
Protein TM-score |
RNA TM-score |
Protein coverage |
RNA coverage |
Percentage conservation |
Apolar conservation |
H-bond conservation |
Percentage switching out |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0.51 | 2.54 | 0.17 | 0.79 | 0.13 | 0.66 | 0.67 | 0.76 | 0.74 | 0.20 | 0.67 |
Other pairs involving 1DRZ_A_B or 7DCO_R_G
Total number of entries: 21