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All interfaces > All interologs > Interface groups > group141 > 4ED5_A_D vs 6SQN_A_X

Interface analysis


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Common contacts -

4ED5_A
4ED5_D
6SQN_A
6SQN_X
Conserved?
A:23 [ILE] D:8 [U] A:13 [TYR] X:9 [G] ✔
A:23 [ILE] D:9 [U] A:13 [TYR] X:10 [C] ✔
A:65 [PHE] D:9 [U] A:56 [TRP] X:10 [C] ✔
A:65 [PHE] D:10 [U] A:56 [TRP] X:11 [A] ✔
A:63 [TYR] D:8 [U] A:54 [GLN] X:9 [G] ✔
A:63 [TYR] D:9 [U] A:54 [GLN] X:10 [C] ✔
A:99 [SER] D:10 [U] A:90 [ASP] X:11 [A] ✔
A:97 [ARG] D:9 [U] A:88 [LYS] X:10 [C] ✔
A:96 [ALA] D:9 [U] A:87 [ALA] X:10 [C] ✔
A:96 [ALA] D:10 [U] A:87 [ALA] X:11 [A] ✔
A:29 [GLN] D:6 [U] A:19 [GLU] X:7 [U] ✔
A:29 [GLN] D:7 [A] A:19 [GLU] X:8 [U] ✔
A:21 [ASN] D:10 [U] A:11 [THR] X:11 [A] ✔
A:89 [LYS] D:7 [A] A:80 [LYS] X:8 [U] ✔
A:26 [TYR] D:7 [A] A:16 [ASN] X:8 [U] ✔
A:26 [TYR] D:8 [U] A:16 [ASN] X:9 [G] ✔
A:50 [LYS] D:10 [U] A:44 [LEU] X:11 [A] ✔
A:50 [LYS] D:11 [U] A:44 [LEU] X:12 [C] ✔
A:95 [TYR] D:9 [U] A:86 [TYR] X:10 [C] ✔
A:25 [ASN] D:8 [U] A:15 [ASN] X:9 [G] ✔
A:98 [PRO] D:9 [U] A:89 [THR] X:10 [C] ❌ 6SQN_A_X
A:60 [SER] D:7 [A] A:51 [MET] X:8 [U] ❌ 6SQN_A_X
A:63 [TYR] D:7 [A] A:54 [GLN] X:8 [U] ❌ 6SQN_A_X
A:99 [SER] D:9 [U] A:90 [ASP] X:10 [C] ❌ 6SQN_A_X
A:97 [ARG] D:8 [U] A:88 [LYS] X:9 [G] ❌ 6SQN_A_X
A:61 [LEU] D:7 [A] A:52 [ARG] X:8 [U] ❌ 6SQN_A_X
A:94 [SER] D:8 [U] A:85 [GLN] X:9 [G] ❌ 6SQN_A_X
A:62 [GLY] D:7 [A] A:53 [GLY] X:8 [U] ❌ 6SQN_A_X
A:89 [LYS] D:6 [U] A:80 [LYS] X:7 [U] ❌ 6SQN_A_X
A:25 [ASN] D:7 [A] A:15 [ASN] X:8 [U] ❌ 4ED5_A_D
A:29 [GLN] D:8 [U] A:19 [GLU] X:9 [G] ❌ 4ED5_A_D
A:29 [GLN] D:3 [U] A:19 [GLU] X:6 [A] ❌ 4ED5_A_D
A:60 [SER] D:8 [U] A:51 [MET] X:9 [G] ❌ 4ED5_A_D
A:60 [SER] D:10 [U] A:51 [MET] X:11 [A] ❌ 4ED5_A_D
A:61 [LEU] D:8 [U] A:52 [ARG] X:9 [G] ❌ 4ED5_A_D
A:61 [LEU] D:3 [U] A:52 [ARG] X:6 [A] ❌ 4ED5_A_D
A:61 [LEU] D:6 [U] A:52 [ARG] X:7 [U] ❌ 4ED5_A_D
A:62 [GLY] D:8 [U] A:53 [GLY] X:9 [G] ❌ 4ED5_A_D
A:94 [SER] D:9 [U] A:85 [GLN] X:10 [C] ❌ 4ED5_A_D
A:98 [PRO] D:11 [U] A:89 [THR] X:12 [C] ❌ 4ED5_A_D
A:98 [PRO] D:10 [U] A:89 [THR] X:11 [A] ❌ 4ED5_A_D
A:99 [SER] D:11 [U] A:90 [ASP] X:12 [C] ❌ 4ED5_A_D
A:92 [LYS] D:8 [U] A:83 [ARG] X:9 [G] ❌ 6SQN_A:83 no longer at interface
A:52 [ILE] D:10 [U] A:46 [SER] X:11 [A] ❌ 6SQN_A:46 no longer at interface
A:27 [LEU] D:8 [U] A:17 [LEU] X:9 [G] ❌ 4ED5_A:27 no longer at interface
A:55 [LYS] D:8 [U] A:49 [LEU] X:9 [G] ❌ 4ED5_A:55 no longer at interface
A:55 [LYS] D:3 [U] A:49 [LEU] X:6 [A] ❌ 4ED5_A:55 no longer at interface
A:55 [LYS] D:6 [U] A:49 [LEU] X:7 [U] ❌ 4ED5_A:55 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
RNA-binding domain, RBD 0.65 2.53 0.10 0.71 0.18 0.67 0.7 0.55 0.60 0.10 0.21


Other pairs involving 4ED5_A_D or 6SQN_A_X

Total number of entries: 20

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1DRZ_A_B 6SQN_A_X 0.95 0.96 0.29 0.89 RNA-binding domain, RBD compare
6F4G_B_C 6SQN_A_X 0.91 0.87 0.39 0.6 RNA-binding domain, RBD compare
4ED5_A_D 6F4G_B_C 0.57 0.62 2.44 0.1 RNA-binding domain, RBD compare
4ED5_A_D 6SQN_A_X 0.55 0.65 2.53 0.1 RNA-binding domain, RBD compare
4ED5_A_D 6F4H_A_B 0.56 0.65 2.49 0.1 RNA-binding domain, RBD compare
1G2E_A_B 6SQN_A_X 0.55 0.64 3.14 0.1 RNA-binding domain, RBD compare
1G2E_A_B 4ED5_A_D 0.92 0.95 0.7 0.8 RNA-binding domain, RBD compare
4PR6_A_B 6SQN_A_X 0.95 0.96 0.3 0.89 RNA-binding domain, RBD compare
3MXH_P_R 6SQN_A_X 0.91 0.88 0.96 0.7 RNA-binding domain, RBD compare
1A9N_B_Q 6SQN_A_X 0.92 0.87 0.86 0.6 RNA-binding domain, RBD compare
1A9N_B_Q 4ED5_A_D 0.54 0.62 2.45 0.1 RNA-binding domain, RBD compare
6SQN_A_X 7DCO_R_G 0.73 0.72 2.65 0.17 compare
6SQN_A_X 7DCO_X_G 0.45 0.66 2.52 0.12 RNA-binding domain, RBD compare
5TF6_A_B 6SQN_A_X 0.56 0.63 2.54 0.1 RNA-binding domain, RBD compare
1M5O_C_B 6SQN_A_X 0.99 0.95 0.55 0.93 RNA-binding domain, RBD compare
6DCL_A_D 6SQN_A_X 0.28 0.63 1.96 0.13 RNA-binding domain, RBD compare
4N0T_A_B 6SQN_A_X 0.59 0.65 3.87 0.0 RNA-binding domain, RBD compare
4PKD_B_V 6SQN_A_X 0.96 0.94 0.34 0.8 RNA-binding domain, RBD compare
2NZ4_A_P 6SQN_A_X 0.96 0.93 0.39 0.8 RNA-binding domain, RBD compare
6F4H_A_B 6SQN_A_X 0.93 0.92 0.38 0.74 RNA-binding domain, RBD compare