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All interfaces > All interologs > Interface groups > group141 > 6F4G_B_C vs 6F4H_A_B

Interface analysis


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Common contacts -

6F4G_B
6F4G_C
6F4H_A
6F4H_B
Conserved?
B:88 [SER] C:14 [A] A:88 [SER] B:12 [A] ✔
B:88 [SER] C:15 [G] A:88 [SER] B:13 [C] ✔
B:8 [THR] C:14 [A] A:8 [THR] B:12 [A] ✔
B:53 [PHE] C:13 [C] A:53 [PHE] B:11 [C] ✔
B:53 [PHE] C:14 [A] A:53 [PHE] B:12 [A] ✔
B:51 [GLN] C:12 [G] A:51 [GLN] B:10 [G] ✔
B:51 [GLN] C:13 [C] A:51 [GLN] B:11 [C] ✔
B:82 [ALA] C:13 [C] A:82 [ALA] B:11 [C] ✔
B:14 [LEU] C:12 [G] A:14 [LEU] B:10 [G] ✔
B:85 [LYS] C:13 [C] A:85 [LYS] B:11 [C] ✔
B:86 [SER] C:13 [C] A:86 [SER] B:11 [C] ✔
B:86 [SER] C:14 [A] A:86 [SER] B:12 [A] ✔
B:86 [SER] C:15 [G] A:86 [SER] B:13 [C] ✔
B:84 [SER] C:13 [C] A:84 [SER] B:11 [C] ✔
B:84 [SER] C:14 [A] A:84 [SER] B:12 [A] ✔
B:55 [ILE] C:14 [A] A:55 [ILE] B:12 [A] ✔
B:41 [VAL] C:14 [A] A:41 [VAL] B:12 [A] ✔
B:13 [ASN] C:11 [U] A:13 [ASN] B:9 [U] ✔
B:13 [ASN] C:12 [G] A:13 [ASN] B:10 [G] ✔
B:83 [TYR] C:13 [C] A:83 [TYR] B:11 [C] ✔
B:12 [ASN] C:11 [U] A:12 [ASN] B:9 [U] ✔
B:12 [ASN] C:12 [G] A:12 [ASN] B:10 [G] ✔
B:46 [LEU] C:10 [U] A:46 [LEU] B:8 [U] ✔
B:46 [LEU] C:12 [G] A:46 [LEU] B:10 [G] ✔
B:48 [MET] C:12 [G] A:48 [MET] B:10 [G] ✔
B:48 [MET] C:13 [C] A:48 [MET] B:11 [C] ✔
B:48 [MET] C:14 [A] A:48 [MET] B:12 [A] ✔
B:47 [LYS] C:12 [G] A:47 [LYS] B:10 [G] ✔
B:47 [LYS] C:13 [C] A:47 [LYS] B:11 [C] ✔
B:47 [LYS] C:14 [A] A:47 [LYS] B:12 [A] ✔
B:90 [ILE] C:15 [G] A:90 [ILE] B:13 [C] ✔
B:50 [GLY] C:12 [G] A:50 [GLY] B:10 [G] ✔
B:16 [GLU] C:9 [A] A:16 [GLU] B:7 [A] ✔
B:16 [GLU] C:10 [U] A:16 [GLU] B:8 [U] ✔
B:16 [GLU] C:12 [G] A:16 [GLU] B:10 [G] ✔
B:77 [LYS] C:11 [U] A:77 [LYS] B:9 [U] ✔
B:49 [ARG] C:10 [U] A:49 [ARG] B:8 [U] ✔
B:49 [ARG] C:12 [G] A:49 [ARG] B:10 [G] ✔
B:10 [TYR] C:12 [G] A:10 [TYR] B:10 [G] ✔
B:10 [TYR] C:13 [C] A:10 [TYR] B:11 [C] ✔
B:87 [ASP] C:14 [A] A:87 [ASP] B:12 [A] ✔
B:87 [ASP] C:15 [G] A:87 [ASP] B:13 [C] ✔
B:89 [ASP] C:14 [A] A:89 [ASP] B:12 [A] ✔
B:89 [ASP] C:15 [G] A:89 [ASP] B:13 [C] ✔
B:43 [LEU] C:14 [A] A:43 [LEU] B:12 [A] ✔
B:80 [GLN] C:11 [U] A:80 [GLN] B:9 [U] ✔
B:41 [VAL] C:15 [G] A:41 [VAL] B:13 [C] ❌ 6F4H_A_B
B:41 [VAL] C:16 [U] A:41 [VAL] B:14 [C] ❌ 6F4H_A_B
B:43 [LEU] C:15 [G] A:43 [LEU] B:13 [C] ❌ 6F4H_A_B
B:43 [LEU] C:16 [U] A:43 [LEU] B:14 [C] ❌ 6F4H_A_B
B:46 [LEU] C:9 [A] A:46 [LEU] B:7 [A] ❌ 6F4G_B_C
B:49 [ARG] C:9 [A] A:49 [ARG] B:7 [A] ❌ 6F4G_B_C
B:89 [ASP] C:16 [U] A:89 [ASP] B:14 [C] ❌ 6F4G_B_C
B:17 [LYS] C:8 [U] A:17 [LYS] B:6 [C] ❌ 6F4H_A:17, 6F4H_B:6 no longer at interface
B:17 [LYS] C:21 [C] A:17 [LYS] B:19 [G] ❌ 6F4H_A:17, 6F4H_B:19 no longer at interface
B:19 [LYS] C:2 [C] A:19 [LYS] B:2 [G] ❌ 6F4G_B:19, 6F4G_C:2 no longer at interface
B:43 [LEU] C:17 [A] A:43 [LEU] B:15 [U] ❌ 6F4G_C:17 no longer at interface
B:24 [LYS] C:16 [U] A:24 [LYS] B:14 [C] ❌ 6F4H_A:24 no longer at interface
B:17 [LYS] C:9 [A] A:17 [LYS] B:7 [A] ❌ 6F4H_A:17 no longer at interface
B:40 [ILE] C:16 [U] A:40 [ILE] B:14 [C] ❌ 6F4H_A:40 no longer at interface
B:42 [ALA] C:16 [U] A:42 [ALA] B:14 [C] ❌ 6F4H_A:42 no longer at interface
B:20 [LYS] C:16 [U] A:20 [LYS] B:14 [C] ❌ 6F4H_A:20 no longer at interface
B:3 [MET] C:13 [C] A:3 [MET] B:11 [C] ❌ 6F4G_B:3 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
RNA-binding domain, RBD 0.87 0.36 0.50 0.98 0.33 0.94 0.67 0.81 0.79 0.68 0.59


Other pairs involving 6F4G_B_C or 6F4H_A_B

Total number of entries: 39

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1DRZ_A_B 6F4H_A_B 0.94 0.95 0.38 0.68 RNA-binding domain, RBD compare
1DRZ_A_B 6F4G_B_C 0.80 0.83 0.38 0.43 RNA-binding domain, RBD compare
6F4G_B_C 6F4H_A_B 0.81 0.87 0.36 0.5 RNA-binding domain, RBD compare
6F4G_B_C 7DCO_p_H 0.23 0.65 0.62 0.14 RNA-binding domain, RBD compare
6F4G_B_C 6SQN_A_X 0.91 0.87 0.39 0.6 RNA-binding domain, RBD compare
6F4G_B_C 7DCO_X_G 0.33 0.62 3.54 0.12 RNA-binding domain, RBD compare
6F4G_B_C 7DCO_R_G 0.76 0.68 2.57 0.14 compare
4ED5_A_D 6F4G_B_C 0.57 0.62 2.44 0.1 RNA-binding domain, RBD compare
4ED5_A_D 6F4H_A_B 0.56 0.65 2.49 0.1 RNA-binding domain, RBD compare
1G2E_A_B 6F4G_B_C 0.57 0.61 3.03 0.15 RNA-binding domain, RBD compare
1G2E_A_B 6F4H_A_B 0.57 0.64 3.02 0.1 RNA-binding domain, RBD compare
1URN_A_P 6F4G_B_C 0.78 0.85 0.36 0.58 RNA-binding domain, RBD compare
1URN_A_P 6F4H_A_B 0.95 0.94 0.32 0.72 RNA-binding domain, RBD compare
4PR6_A_B 6F4H_A_B 0.94 0.95 0.38 0.68 RNA-binding domain, RBD compare
4PR6_A_B 6F4G_B_C 0.80 0.83 0.4 0.46 RNA-binding domain, RBD compare
3MXH_P_R 6F4H_A_B 0.95 0.91 0.91 0.59 RNA-binding domain, RBD compare
3MXH_P_R 6F4G_B_C 0.80 0.77 0.94 0.46 RNA-binding domain, RBD compare
1A9N_B_Q 6F4G_B_C 0.94 0.92 0.25 0.79 RNA-binding domain, RBD compare
1A9N_B_Q 6F4H_A_B 0.81 0.85 0.49 0.5 RNA-binding domain, RBD compare
5TF6_A_B 6F4G_B_C 0.58 0.61 3.75 0.0 RNA-binding domain, RBD compare
5TF6_A_B 6F4H_A_B 0.57 0.64 3.83 0.0 RNA-binding domain, RBD compare
1M5O_C_B 6F4H_A_B 0.95 0.95 0.48 0.7 RNA-binding domain, RBD compare
1M5O_C_B 6F4G_B_C 0.81 0.81 0.4 0.5 RNA-binding domain, RBD compare
6DCL_A_D 6F4H_A_B 0.33 0.63 1.94 0.17 RNA-binding domain, RBD compare
6DCL_A_D 6F4G_B_C 0.32 0.61 2.78 0.26 RNA-binding domain, RBD compare
4N0T_A_B 6F4G_B_C 0.58 0.61 3.62 0.0 RNA-binding domain, RBD compare
4N0T_A_B 6F4H_A_B 0.56 0.64 3.75 0.0 RNA-binding domain, RBD compare
4PKD_B_V 6F4H_A_B 0.88 0.94 0.45 0.65 RNA-binding domain, RBD compare
4PKD_B_V 6F4G_B_C 0.81 0.81 0.46 0.5 RNA-binding domain, RBD compare
2NZ4_A_P 6F4G_B_C 0.85 0.8 0.45 0.43 RNA-binding domain, RBD compare
2NZ4_A_P 6F4H_A_B 0.92 0.95 0.41 0.7 RNA-binding domain, RBD compare
1SJ3_P_R 6F4G_B_C 0.83 0.83 0.4 0.55 RNA-binding domain, RBD compare
1SJ3_P_R 6F4H_A_B 0.97 0.96 0.38 0.71 RNA-binding domain, RBD compare
5DDP_D_A 6F4G_B_C 0.82 0.81 0.36 0.46 RNA-binding domain, RBD compare
5DDP_D_A 6F4H_A_B 0.92 0.96 0.33 0.68 RNA-binding domain, RBD compare
6F4H_A_B 7DCO_4_G 0.35 0.61 1.28 0.17 RNA-binding domain, RBD compare
6F4H_A_B 6SQN_A_X 0.93 0.92 0.38 0.74 RNA-binding domain, RBD compare
6F4H_A_B 7DCO_R_G 0.77 0.7 2.58 0.17 compare
6F4H_A_B 7DCO_X_G 0.43 0.65 2.51 0.12 RNA-binding domain, RBD compare