RNAprotDB

All interfaces > All interologs > Interface groups > group141 > 6XH2_A_D vs 7DCO_X_G

Interface analysis


mouse controls

Style

Protein

Cartoon
Licorice
Surface

RNA

Cartoon
Licorice
Surface

Color

Structure
Structure (with hetatm)
Chain
Chainbow

View

Focus on

Interface
RNA
Protein
All

Show chains

Interface

show interface as licorice

Common contacts -

6XH2_A
6XH2_D
7DCO_X
7DCO_G
Conserved?
A:13 [TYR] D:35 [A] X:34 [TYR] G:520 [G]
A:87 [ALA] D:35 [A] X:107 [THR] G:520 [G]
A:88 [LYS] D:35 [A] X:108 [PHE] G:520 [G]
A:54 [GLN] D:34 [G] X:74 [PHE] G:519 [U]
A:54 [GLN] D:35 [A] X:74 [PHE] G:520 [G]
A:54 [GLN] D:36 [G] X:74 [PHE] G:521 [U]
A:86 [TYR] D:35 [A] X:106 [HIS] G:520 [G]
A:85 [GLN] D:35 [A] X:105 [ASP] G:520 [G]
A:56 [PHE] D:35 [A] X:76 [TYR] G:520 [G]
A:52 [ARG] D:34 [G] X:72 [GLN] G:519 [U]
A:52 [ARG] D:36 [G] X:72 [GLN] G:521 [U] ❌ 7DCO_X_G
A:89 [THR] D:35 [A] X:109 [TYR] G:520 [G] ❌ 7DCO_X_G
A:87 [ALA] D:36 [G] X:107 [THR] G:521 [U] ❌ 6XH2_A_D
A:88 [LYS] D:36 [G] X:108 [PHE] G:521 [U] ❌ 6XH2_A_D
A:89 [THR] D:36 [G] X:109 [TYR] G:521 [U] ❌ 6XH2_A_D
A:19 [SER] D:34 [G] X:40 [ARG] G:519 [U] ❌ 6XH2_A_D
A:56 [PHE] D:36 [G] X:76 [TYR] G:521 [U] ❌ 6XH2_A_D
A:15 [ASN] D:35 [A] X:36 [GLY] G:520 [G] ❌ 7DCO_X:36 no longer at interface
A:50 [THR] D:34 [G] X:70 [GLU] G:519 [U] ❌ 7DCO_X:70 no longer at interface
A:6 [THR] D:35 [A] X:26 [GLU] G:520 [G] ❌ 7DCO_X:26 no longer at interface
A:48 [THR] D:36 [G] X:65 [ASP] G:521 [U] ❌ 7DCO_X:65 no longer at interface
A:49 [ARG] D:36 [G] X:66 [GLU] G:521 [U] ❌ 7DCO_X:66 no longer at interface
A:49 [ARG] D:37 [C] X:66 [GLU] G:522 [U] ❌ 7DCO_X:66 no longer at interface
A:90 [ASP] D:37 [C] X:110 [ARG] G:522 [U] ❌ 6XH2_A:90 no longer at interface
A:90 [ASP] D:36 [G] X:110 [ARG] G:521 [U] ❌ 6XH2_A:90 no longer at interface
A:91 [LYS] D:37 [C] X:111 [PRO] G:522 [U] ❌ 6XH2_A:91 no longer at interface

logo_download Export the table of contacts

Properties of this pair

Common ECOD label(s)
Common RFAM label(s)
Interface TM-score
Interface RMSD
Percentage identity
Protein TM-score
RNA TM-score
Protein coverage
RNA coverage
Percentage conservation
Apolar conservation
H-bond conservation
Percentage switching out
RNA-binding domain, RBD 0.61 1.84 0.00 0.74 0.13 0.62 0.67 0.57 0.42 0.18 0.56


Other pairs involving 6XH2_A_D or 7DCO_X_G

Total number of entries: 11