RNAprotDB

All interfaces > All interologs > Interface groups > group46 > 4ZLR_A_C vs 6FQL_A_B

Interface analysis


mouse controls

Style

Protein

Cartoon
Licorice
Surface

RNA

Cartoon
Licorice
Surface

Color

Structure
Structure (with hetatm)
Chain
Chainbow

View

Focus on

Interface
RNA
Protein
All

Show chains

Interface

show interface as licorice

Common contacts -

4ZLR_A
4ZLR_C
6FQL_A
6FQL_B
Conserved?
A:934 [ARG] C:4 [U] A:723 [ASN] B:9 [A]
A:933 [ASN] C:4 [U] A:722 [PHE] B:9 [A]
A:933 [ASN] C:5 [U] A:722 [PHE] B:10 [U]
A:847 [ARG] C:2 [U] A:628 [LYS] B:7 [U]
A:848 [SER] C:2 [U] A:629 [ASP] B:7 [U]
A:977 [HIS] C:5 [U] A:770 [ARG] B:10 [U]
A:875 [ARG] C:3 [G] A:660 [TRP] B:8 [A]
A:875 [ARG] C:4 [U] A:660 [TRP] B:9 [A]
A:961 [ILE] C:4 [U] A:754 [GLN] B:9 [A]
A:934 [ARG] C:3 [G] A:723 [ASN] B:8 [A] ❌ 6FQL_A_B
A:934 [ARG] C:5 [U] A:723 [ASN] B:10 [U] ❌ 6FQL_A_B
A:782 [GLU] C:2 [U] A:564 [ARG] B:7 [U] ❌ 6FQL_A_B
A:891 [LYS] C:3 [G] A:676 [ARG] B:8 [A] ❌ 6FQL_A_B
A:875 [ARG] C:2 [U] A:660 [TRP] B:7 [U] ❌ 6FQL_A_B
A:800 [ASN] C:2 [U] A:582 [SER] B:7 [U] ❌ 6FQL_A_B
A:782 [GLU] C:3 [G] A:564 [ARG] B:8 [A] ❌ 4ZLR_A_C
A:799 [THR] C:3 [G] A:581 [ARG] B:8 [A] ❌ 4ZLR_A_C
A:800 [ASN] C:3 [G] A:582 [SER] B:8 [A] ❌ 4ZLR_A_C
A:847 [ARG] C:3 [G] A:628 [LYS] B:8 [A] ❌ 4ZLR_A_C
A:891 [LYS] C:2 [U] A:676 [ARG] B:7 [U] ❌ 4ZLR_A_C
A:1001 [HIS] C:5 [U] A:797 [MET] B:10 [U] ❌ 6FQL_A:797 no longer at interface
A:960 [PRO] C:4 [U] A:753 [PRO] B:9 [A] ❌ 6FQL_A:753 no longer at interface
A:1002 [ALA] C:4 [U] A:798 [ASP] B:9 [A] ❌ 6FQL_A:798 no longer at interface
A:1002 [ALA] C:5 [U] A:798 [ASP] B:10 [U] ❌ 6FQL_A:798 no longer at interface
A:959 [TYR] C:4 [U] A:751 [LEU] B:9 [A] ❌ 6FQL_A:751 no longer at interface
A:959 [TYR] C:5 [U] A:751 [LEU] B:10 [U] ❌ 6FQL_A:751 no longer at interface
A:917 [PRO] C:3 [G] A:706 [PRO] B:8 [A] ❌ 6FQL_A:706 no longer at interface
A:915 [GLU] C:3 [G] A:704 [ASP] B:8 [A] ❌ 6FQL_A:704 no longer at interface
A:893 [MET] C:3 [G] A:678 [HIS] B:8 [A] ❌ 6FQL_A:678 no longer at interface
A:976 [ASN] C:4 [U] A:769 [SER] B:9 [A] ❌ 6FQL_A:769 no longer at interface
A:976 [ASN] C:5 [U] A:769 [SER] B:10 [U] ❌ 6FQL_A:769 no longer at interface
A:1004 [CYS] C:4 [U] A:800 [PRO] B:9 [A] ❌ 6FQL_A:800 no longer at interface
A:1004 [CYS] C:5 [U] A:800 [PRO] B:10 [U] ❌ 6FQL_A:800 no longer at interface
A:916 [PHE] C:3 [G] A:705 [SER] B:8 [A] ❌ 6FQL_A:705 no longer at interface
A:916 [PHE] C:4 [U] A:705 [SER] B:9 [A] ❌ 6FQL_A:705 no longer at interface
A:1003 [GLN] C:4 [U] A:799 [ARG] B:9 [A] ❌ 6FQL_A:799 no longer at interface
A:1003 [GLN] C:5 [U] A:799 [ARG] B:10 [U] ❌ 6FQL_A:799 no longer at interface
A:890 [CYS] C:3 [G] A:675 [THR] B:8 [A] ❌ 6FQL_A:675 no longer at interface
A:873 [HIS] C:2 [U] A:658 [TYR] B:7 [U] ❌ 4ZLR_A:873 no longer at interface
A:918 [ASN] C:4 [U] A:707 [ARG] B:9 [A] ❌ 4ZLR_A:918 no longer at interface
A:918 [ASN] C:3 [G] A:707 [ARG] B:8 [A] ❌ 4ZLR_A:918 no longer at interface

logo_download Export the table of contacts

Properties of this pair

Common ECOD label(s)
Common RFAM label(s)
Interface TM-score
Interface RMSD
Percentage identity
Protein TM-score
RNA TM-score
Protein coverage
RNA coverage
Percentage conservation
Apolar conservation
H-bond conservation
Percentage switching out
6-bladed 0.84 2.36 0.00 0.86 0.1 0.71 0.8 0.19 0.05 0.00 0.66


Other pairs involving 4ZLR_A_C or 6FQL_A_B

Total number of entries: 3