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All interfaces > All interologs > Interface groups > group95 > 3BSX_A_C

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Licorice
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Licorice
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Chain
Chain (with hetatm)
Chainbow
Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

3BSX_A
3BSX_C
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
A:860 [GLN] C:10 [U] 2.95 sugar:SC 87.57
A:863 [SER] C:10 [U] 4.18 96.26
A:864 [ARG] C:10 [U] 4.69 91.29
A:867 [GLN] C:10 [U] 2.92 base:SC, base:SC 97.46
A:896 [VAL] C:9 [U] 3.72 65.26
A:896 [VAL] C:10 [U] 4.75 65.26
A:897 [PHE] C:10 [U] 3.31 80.74
A:899 [ASN] C:9 [U] 2.78 base:SC, base:SC 96.18
A:900 [TYR] C:9 [U] 3.08 base/AA stacks 82.37
A:900 [TYR] C:10 [U] 3.12 base/AA stacks 82.37
A:903 [GLN] C:9 [U] 3.17 base:SC 98.81
A:932 [MET] C:8 [A] 4.96 46.09
A:932 [MET] C:9 [U] 4.72 46.09
A:933 [TYR] C:9 [U] 3.29 82.8
A:935 [CYS] C:8 [A] 3.53 90.94
A:936 [ARG] C:8 [A] 3.24 base/AA stacks 93.58
A:936 [ARG] C:9 [U] 3.29 base/AA stacks 93.58
A:939 [GLN] C:8 [A] 2.71 base:SC, base:SC 98.55
A:968 [GLN] C:6 [A] 4.4 63.83
A:968 [GLN] C:7 [U] 3.49 63.83
A:968 [GLN] C:8 [A] 4.12 63.83
A:969 [ASN] C:8 [A] 3.5 sugar:SC 83.35
A:971 [ASN] C:6 [A] 3.33 97.27
A:972 [HIS] C:6 [A] 3.25 base/AA stacks 96.39
A:972 [HIS] C:8 [A] 3.24 base/AA stacks 96.39
A:975 [GLN] C:6 [A] 3.1 base:SC 96.87
A:1004 [PRO] C:6 [A] 3.8 0.0
A:1004 [PRO] C:7 [U] 4.57 0.0
A:1005 [TYR] C:6 [A] 3.88 0.0
A:1005 [TYR] C:7 [U] 3.2 0.0
A:1007 [CYS] C:5 [A] 3.62 0.0
A:1008 [ARG] C:5 [A] 3.37 base/AA stacks 0.0
A:1008 [ARG] C:6 [A] 3.32 base/AA stacks 0.0
A:1011 [GLN] C:5 [A] 2.98 base:SC, base:SC 0.0
A:1012 [ARG] C:6 [A] 4.77 0.0
A:1040 [GLN] C:4 [U] 3.7 0.0
A:1040 [GLN] C:5 [A] 4.85 0.0
A:1041 [TYR] C:5 [A] 3.54 0.0
A:1041 [TYR] C:6 [A] 4.53 0.0
A:1043 [ASN] C:4 [U] 2.93 base:SC, base:SC 0.0
A:1044 [TYR] C:4 [U] 2.9 base/AA stacks 0.0
A:1044 [TYR] C:5 [A] 3.07 base/AA stacks 0.0
A:1047 [GLN] C:4 [U] 3.02 base:SC 0.0
A:1076 [LYS] C:3 [G] 3.79 0.0
A:1076 [LYS] C:4 [U] 3.89 0.0
A:1077 [PHE] C:4 [U] 3.13 0.0
A:1079 [SER] C:3 [G] 2.8 base:SC 0.0
A:1080 [ASN] C:3 [G] 3.51 base/AA stacks 0.0
A:1080 [ASN] C:4 [U] 3.27 base/AA stacks 0.0
A:1083 [GLU] C:3 [G] 2.6 base:SC, base:SC 0.0
A:1119 [GLN] C:2 [U] 3.75 0.0
A:1119 [GLN] C:3 [G] 4.53 0.0
A:1120 [TYR] C:3 [G] 3.58 0.0
A:1122 [ASN] C:2 [U] 2.82 base:SC, base:SC 0.0
A:1123 [TYR] C:2 [U] 3.04 base/AA stacks 0.0
A:1123 [TYR] C:3 [G] 3.33 base/AA stacks 0.0
A:1126 [GLN] C:2 [U] 2.73 base:SC 0.0
A:1156 [TYR] C:2 [U] 3.23 0.0
A:1159 [HIS] C:2 [U] 3.36 base/AA stacks 0.0

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group95 3BSX_A_C A: Pumilio homolog 1, Homo sapiens (genetically engineered) C: N/A Q14671 ARM repeat ✘

Interologs

Total number of interologs for this interface: 5

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
3BSX_A_C 3K49_A_B 0.94 0.89 2.08 0.78 ARM repeat compare
3BSX_A_C 3V6Y_A_B 0.94 0.85 1.95 0.56 ARM repeat compare
3BSX_A_C 3V74_A_B 0.89 0.85 1.99 0.56 ARM repeat compare
3BSX_A_C 5BZ1_A_B 0.67 0.75 3.22 0.67 ARM repeat compare
3BSX_A_C 5WZJ_A_B 0.66 0.7 2.34 0.11 ARM repeat compare