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All interfaces > All interologs > Interface groups > group95 > 3K49_A_B

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Licorice
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Licorice
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Chain
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Hydrophobicity
Electrostatics (surface only)
Conservation*

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Rim - Core

Contacts -

3K49_A
3K49_B
Distance
Base Pair
Hbond nuc:res
Base Stacking
Residue conservation
A:550 [GLN] B:10 [A] 3.15 sugar:SC 89.57
A:553 [SER] B:10 [A] 4.33 95.8
A:554 [ARG] B:10 [A] 2.76 sugar:SC base/AA stacks 91.9
A:557 [GLN] B:10 [A] 2.99 base:SC, base:SC 98.03
A:586 [VAL] B:9 [U] 4.05 74.25
A:586 [VAL] B:10 [A] 4.68 74.25
A:587 [PHE] B:10 [A] 3.62 84.28
A:589 [ASN] B:9 [U] 3.01 base:SC, base:SC 98.3
A:590 [TYR] B:9 [U] 3.08 base/AA stacks 84.48
A:590 [TYR] B:10 [A] 3.24 base/AA stacks 84.48
A:593 [GLN] B:9 [U] 3.01 base:SC 98.89
A:622 [MET] B:8 [A] 3.66 55.15
A:622 [MET] B:9 [U] 4.52 55.15
A:623 [TYR] B:9 [U] 3.37 83.35
A:625 [CYS] B:8 [A] 3.63 92.79
A:626 [ARG] B:8 [A] 3.34 base/AA stacks 98.89
A:626 [ARG] B:9 [U] 3.04 sugar:SC base/AA stacks 98.89
A:629 [GLN] B:8 [A] 2.79 base:SC, base:SC 99.0
A:658 [GLN] B:8 [A] 3.3 74.13
A:659 [ASN] B:8 [A] 3.64 sugar:SC 86.88
A:661 [ASN] B:7 [A] 3.16 98.92
A:662 [HIS] B:7 [A] 3.32 sugar:SC base/AA stacks 97.92
A:662 [HIS] B:8 [A] 3.07 base/AA stacks 97.92
A:665 [GLN] B:7 [A] 2.85 base:SC, base:SC 98.78
A:694 [SER] B:6 [A] 3.24 sugar:SC 57.4
A:694 [SER] B:7 [A] 4.03 57.4
A:695 [TYR] B:7 [A] 3.87 82.53
A:695 [TYR] B:8 [A] 2.78 82.53
A:697 [CYS] B:6 [A] 3.6 97.82
A:698 [ARG] B:6 [A] 3.32 base/AA stacks 97.71
A:698 [ARG] B:7 [A] 3.09 base/AA stacks 97.71
A:701 [GLN] B:6 [A] 3.27 base:SC 99.0
A:730 [GLN] B:5 [U] 3.81 80.39
A:730 [GLN] B:6 [A] 4.74 80.39
A:731 [TYR] B:6 [A] 3.38 75.65
A:733 [ASN] B:5 [U] 2.88 base:SC, base:SC 99.0
A:734 [TYR] B:5 [U] 2.95 base/AA stacks 97.55
A:734 [TYR] B:6 [A] 3.39 base/AA stacks 97.55
A:737 [GLN] B:5 [U] 2.61 base:SC 98.92
A:772 [LYS] B:4 [G] 3.02 sugar:SC 98.49
A:772 [LYS] B:5 [U] 3.15 98.49
A:773 [PHE] B:5 [U] 3.13 65.5
A:775 [SER] B:4 [G] 2.87 base:SC 98.95
A:776 [ASN] B:4 [G] 3.39 96.42
A:776 [ASN] B:5 [U] 3.26 base/AA stacks 96.42
A:779 [GLU] B:4 [G] 2.54 base:SC, base:SC 95.75
A:819 [LYS] B:1 [C] 3.26 base:BB 50.71
A:820 [ASP] B:1 [C] 3.88 94.43
A:821 [GLN] B:1 [C] 3.74 64.75
A:821 [GLN] B:3 [U] 3.29 base:BB 64.75
A:822 [PHE] B:4 [G] 3.86 71.25
A:824 [ASN] B:1 [C] 4.54 98.95
A:824 [ASN] B:3 [U] 2.83 base:SC, base:SC 98.95
A:825 [TYR] B:3 [U] 2.95 base/AA stacks 92.52
A:825 [TYR] B:4 [G] 3.37 base/AA stacks 92.52
A:828 [GLN] B:3 [U] 2.75 base:SC 92.84
A:863 [HIS] B:1 [C] 4.29 63.54
A:864 [LEU] B:1 [C] 3.22 46.75
A:865 [ALA] B:1 [C] 2.96 sugar:BB 57.5
A:865 [ALA] B:2 [C] 3.55 57.5
A:865 [ALA] B:3 [U] 3.44 57.5
A:866 [SER] B:1 [C] 2.71 base:BB, base:SC, base:SC 35.7
A:866 [SER] B:3 [U] 3.41 35.7
A:867 [VAL] B:1 [C] 4.84 46.99
A:869 [LYS] B:3 [U] 3.39 49.56

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*Conservation was calculated using Rate4Site
NB: conservation is missing (completly white) for a very small minority of cases in which no homologous sequences were found (e.g. synthetic proteins 7D3J_A & 7EU9_A)

Properties of this interface

Interolog group ID Structure ID Structure description
 UniProt ID
 		ECOD label(s)
 		RFAM label(s)
 		Is ribosome? RCSB PDB link
group95 3K49_A_B A: mRNA-binding protein puf3, Saccharomyces cerevisiae (genetically engineered) B: N/A Q07807 ARM repeat ✘

Interologs

Total number of interologs for this interface: 5

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
3K49_A_B 5BZ1_A_B 0.25 0.65 4.33 0.0 ARM repeat compare
3K49_A_B 5WZJ_A_B 0.71 0.72 2.65 0.09 ARM repeat compare
3K49_A_B 3V6Y_A_B 0.80 0.73 3.21 0.5 ARM repeat compare
3K49_A_B 3V74_A_B 0.90 0.73 3.17 0.6 ARM repeat compare
3BSX_A_C 3K49_A_B 0.94 0.89 2.08 0.78 ARM repeat compare