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All interfaces > All interologs > Interface groups > group141 > 1A9N_B_Q vs 1G2E_A_B

Interface analysis


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Common contacts -

1A9N_B
1A9N_Q
1G2E_A
1G2E_B
Conserved?
B:13 [TYR] Q:9 [G] A:42 [ILE] B:8 [U] ✔
B:13 [TYR] Q:10 [C] A:42 [ILE] B:9 [U] ✔
B:90 [ASP] Q:11 [A] A:118 [SER] B:10 [U] ✔
B:15 [ASN] Q:9 [G] A:44 [ASN] B:8 [U] ✔
B:87 [ALA] Q:10 [C] A:115 [ALA] B:9 [U] ✔
B:87 [ALA] Q:11 [A] A:115 [ALA] B:10 [U] ✔
B:11 [THR] Q:11 [A] A:40 [ASN] B:10 [U] ✔
B:88 [LYS] Q:10 [C] A:116 [ARG] B:9 [U] ✔
B:44 [VAL] Q:11 [A] A:69 [LYS] B:10 [U] ✔
B:44 [VAL] Q:12 [G] A:69 [LYS] B:11 [A] ✔
B:54 [GLN] Q:9 [G] A:82 [TYR] B:8 [U] ✔
B:54 [GLN] Q:10 [C] A:82 [TYR] B:9 [U] ✔
B:46 [LEU] Q:11 [A] A:71 [VAL] B:10 [U] ✔
B:19 [ASP] Q:7 [U] A:48 [GLN] B:6 [U] ✔
B:86 [TYR] Q:10 [C] A:114 [TYR] B:9 [U] ✔
B:80 [LYS] Q:7 [U] A:108 [LYS] B:6 [U] ✔
B:80 [LYS] Q:8 [U] A:108 [LYS] B:7 [A] ✔
B:16 [ASN] Q:8 [U] A:45 [TYR] B:7 [A] ✔
B:16 [ASN] Q:9 [G] A:45 [TYR] B:8 [U] ✔
B:56 [PHE] Q:10 [C] A:84 [PHE] B:9 [U] ✔
B:56 [PHE] Q:11 [A] A:84 [PHE] B:10 [U] ✔
B:89 [THR] Q:10 [C] A:117 [PRO] B:9 [U] ✔
B:90 [ASP] Q:12 [G] A:118 [SER] B:11 [A] ❌ 1G2E_A_B
B:15 [ASN] Q:8 [U] A:44 [ASN] B:7 [A] ❌ 1G2E_A_B
B:53 [GLY] Q:9 [G] A:81 [GLY] B:8 [U] ❌ 1G2E_A_B
B:83 [ARG] Q:8 [U] A:111 [LYS] B:7 [A] ❌ 1G2E_A_B
B:46 [LEU] Q:12 [G] A:71 [VAL] B:11 [A] ❌ 1G2E_A_B
B:51 [MET] Q:9 [G] A:79 [SER] B:8 [U] ❌ 1G2E_A_B
B:51 [MET] Q:10 [C] A:79 [SER] B:9 [U] ❌ 1G2E_A_B
B:51 [MET] Q:11 [A] A:79 [SER] B:10 [U] ❌ 1G2E_A_B
B:19 [ASP] Q:6 [A] A:48 [GLN] B:3 [A] ❌ 1G2E_A_B
B:19 [ASP] Q:9 [G] A:48 [GLN] B:8 [U] ❌ 1G2E_A_B
B:85 [GLN] Q:10 [C] A:113 [SER] B:9 [U] ❌ 1G2E_A_B
B:49 [MET] Q:6 [A] A:74 [LYS] B:3 [A] ❌ 1G2E_A_B
B:49 [MET] Q:7 [U] A:74 [LYS] B:6 [U] ❌ 1G2E_A_B
B:49 [MET] Q:9 [G] A:74 [LYS] B:8 [U] ❌ 1G2E_A_B
B:52 [ARG] Q:6 [A] A:80 [LEU] B:3 [A] ❌ 1G2E_A_B
B:52 [ARG] Q:7 [U] A:80 [LEU] B:6 [U] ❌ 1G2E_A_B
B:52 [ARG] Q:9 [G] A:80 [LEU] B:8 [U] ❌ 1G2E_A_B
B:89 [THR] Q:11 [A] A:117 [PRO] B:10 [U] ❌ 1G2E_A_B
B:89 [THR] Q:12 [G] A:117 [PRO] B:11 [A] ❌ 1G2E_A_B
B:83 [ARG] Q:9 [G] A:111 [LYS] B:8 [U] ❌ 1A9N_B_Q
B:85 [GLN] Q:9 [G] A:113 [SER] B:8 [U] ❌ 1A9N_B_Q
B:88 [LYS] Q:9 [G] A:116 [ARG] B:8 [U] ❌ 1A9N_B_Q
B:90 [ASP] Q:10 [C] A:118 [SER] B:9 [U] ❌ 1A9N_B_Q
B:19 [ASP] Q:8 [U] A:48 [GLN] B:7 [A] ❌ 1A9N_B_Q
B:47 [LYS] Q:12 [G] A:72 [ARG] B:11 [A] ❌ 1A9N_B_Q
B:49 [MET] Q:12 [G] A:74 [LYS] B:11 [A] ❌ 1A9N_B_Q
B:51 [MET] Q:8 [U] A:79 [SER] B:7 [A] ❌ 1A9N_B_Q
B:52 [ARG] Q:8 [U] A:80 [LEU] B:7 [A] ❌ 1A9N_B_Q
B:53 [GLY] Q:8 [U] A:81 [GLY] B:7 [A] ❌ 1A9N_B_Q
B:54 [GLN] Q:11 [A] A:82 [TYR] B:10 [U] ❌ 1A9N_B_Q
B:17 [MET] Q:9 [G] A:46 [LEU] B:8 [U] ❌ 1G2E_A:46 no longer at interface
B:58 [ILE] Q:11 [A] A:86 [ASN] B:10 [U] ❌ 1G2E_A:86 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
RNA-binding domain, RBD 0.62 3.02 0.16 0.71 0.12 0.59 0.7 0.54 0.60 0.09 0.06


Other pairs involving 1A9N_B_Q or 1G2E_A_B

Total number of entries: 25

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1A9N_B_Q 1DRZ_A_B 0.81 0.85 0.47 0.5 RNA-binding domain, RBD compare
1A9N_B_Q 1G2E_A_B 0.54 0.62 3.02 0.16 RNA-binding domain, RBD compare
1A9N_B_Q 1M5O_C_B 0.86 0.83 0.56 0.43 RNA-binding domain, RBD compare
1A9N_B_Q 1SJ3_P_R 0.83 0.85 0.49 0.55 RNA-binding domain, RBD compare
1G2E_A_B 1URN_A_P 0.54 0.62 3.07 0.1 RNA-binding domain, RBD compare
1A9N_B_Q 1URN_A_P 0.78 0.85 0.84 0.58 RNA-binding domain, RBD compare
1A9N_B_Q 2NZ4_A_P 0.79 0.83 0.54 0.5 RNA-binding domain, RBD compare
1A9N_B_Q 3MXH_P_R 0.79 0.78 1.0 0.46 RNA-binding domain, RBD compare
1G2E_A_B 4ED5_A_D 0.92 0.95 0.7 0.8 RNA-binding domain, RBD compare
1A9N_B_Q 4ED5_A_D 0.54 0.62 2.45 0.1 RNA-binding domain, RBD compare
1A9N_B_Q 4PKD_B_V 0.75 0.85 0.6 0.5 RNA-binding domain, RBD compare
1A9N_B_Q 4PR6_A_B 0.81 0.85 0.49 0.54 RNA-binding domain, RBD compare
1A9N_B_Q 5DDP_D_A 0.81 0.82 0.42 0.46 RNA-binding domain, RBD compare
1A9N_B_Q 5WWE_A_B 0.72 0.6 2.34 0.2 RNA-binding domain, RBD compare
1A9N_B_Q 6DCL_A_D 0.32 0.6 2.71 0.2 RNA-binding domain, RBD compare
1G2E_A_B 6F4G_B_C 0.57 0.61 3.03 0.15 RNA-binding domain, RBD compare
1A9N_B_Q 6F4G_B_C 0.94 0.92 0.25 0.79 RNA-binding domain, RBD compare
1G2E_A_B 6F4H_A_B 0.57 0.64 3.02 0.1 RNA-binding domain, RBD compare
1A9N_B_Q 6F4H_A_B 0.81 0.85 0.49 0.5 RNA-binding domain, RBD compare
1G2E_A_B 6SQN_A_X 0.55 0.64 3.14 0.1 RNA-binding domain, RBD compare
1A9N_B_Q 6SQN_A_X 0.92 0.87 0.86 0.6 RNA-binding domain, RBD compare
1A9N_B_Q 7DCO_4_G 0.43 0.58 1.31 0.17 RNA-binding domain, RBD compare
1A9N_B_Q 7DCO_R_G 0.79 0.68 2.58 0.17 compare
1A9N_B_Q 7DCO_X_G 0.31 0.63 3.58 0.12 RNA-binding domain, RBD compare
1A9N_B_Q 7DCO_p_H 0.32 0.68 0.46 0.29 RNA-binding domain, RBD compare