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All interfaces > All interologs > Interface groups > group141 > 1A9N_B_Q vs 7DCO_4_G

Interface analysis


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Common contacts -

1A9N_B
1A9N_Q
7DCO_4
7DCO_G
Conserved?
B:13 [TYR] Q:9 [G] 4:12 [TYR] G:481 [A] ✔
B:27 [LYS] Q:13 [U] 4:22 [LYS] G:484 [A] ✔
B:11 [THR] Q:11 [A] 4:10 [THR] G:483 [A] ✔
B:44 [VAL] Q:11 [A] 4:39 [LYS] G:483 [A] ✔
B:44 [VAL] Q:13 [U] 4:39 [LYS] G:484 [A] ✔
B:58 [ILE] Q:11 [A] 4:56 [GLU] G:483 [A] ✔
B:54 [GLN] Q:9 [G] 4:52 [TYR] G:481 [A] ✔
B:54 [GLN] Q:10 [C] 4:52 [TYR] G:482 [A] ✔
B:46 [LEU] Q:11 [A] 4:41 [PRO] G:483 [A] ✔
B:46 [LEU] Q:13 [U] 4:41 [PRO] G:484 [A] ✔
B:45 [ALA] Q:13 [U] 4:40 [TYR] G:484 [A] ✔
B:56 [PHE] Q:11 [A] 4:54 [PHE] G:483 [A] ✔
B:52 [ARG] Q:9 [G] 4:50 [GLN] G:481 [A] ✔
B:13 [TYR] Q:10 [C] 4:12 [TYR] G:482 [A] ❌ 7DCO_4_G
B:87 [ALA] Q:10 [C] 4:86 [VAL] G:482 [A] ❌ 7DCO_4_G
B:87 [ALA] Q:11 [A] 4:86 [VAL] G:483 [A] ❌ 7DCO_4_G
B:86 [TYR] Q:10 [C] 4:85 [GLN] G:482 [A] ❌ 7DCO_4_G
B:85 [GLN] Q:10 [C] 4:84 [ARG] G:482 [A] ❌ 7DCO_4_G
B:56 [PHE] Q:10 [C] 4:54 [PHE] G:482 [A] ❌ 7DCO_4_G
B:46 [LEU] Q:10 [C] 4:41 [PRO] G:482 [A] ❌ 1A9N_B_Q
B:47 [LYS] Q:13 [U] 4:42 [LYS] G:484 [A] ❌ 1A9N_B_Q
B:48 [THR] Q:13 [U] 4:43 [ASP] G:484 [A] ❌ 1A9N_B_Q
B:48 [THR] Q:10 [C] 4:43 [ASP] G:482 [A] ❌ 1A9N_B_Q
B:52 [ARG] Q:10 [C] 4:50 [GLN] G:482 [A] ❌ 1A9N_B_Q
B:54 [GLN] Q:11 [A] 4:52 [TYR] G:483 [A] ❌ 1A9N_B_Q
B:56 [PHE] Q:9 [G] 4:54 [PHE] G:481 [A] ❌ 1A9N_B_Q
B:85 [GLN] Q:8 [U] 4:84 [ARG] G:480 [A] ❌ 1A9N_B_Q
B:85 [GLN] Q:9 [G] 4:84 [ARG] G:481 [A] ❌ 1A9N_B_Q
B:86 [TYR] Q:9 [G] 4:85 [GLN] G:481 [A] ❌ 1A9N_B_Q
B:87 [ALA] Q:9 [G] 4:86 [VAL] G:481 [A] ❌ 1A9N_B_Q
B:15 [ASN] Q:8 [U] 4:14 [GLY] G:480 [A] ❌ 7DCO_4:14 no longer at interface
B:15 [ASN] Q:9 [G] 4:14 [GLY] G:481 [A] ❌ 7DCO_4:14 no longer at interface
B:43 [ILE] Q:13 [U] 4:38 [ILE] G:484 [A] ❌ 7DCO_4:38 no longer at interface
B:53 [GLY] Q:9 [G] 4:51 [GLY] G:481 [A] ❌ 7DCO_4:51 no longer at interface
B:17 [MET] Q:9 [G] 4:16 [ILE] G:481 [A] ❌ 7DCO_4:16 no longer at interface
B:83 [ARG] Q:8 [U] 4:82 [LYS] G:480 [A] ❌ 7DCO_4:82 no longer at interface
B:51 [MET] Q:9 [G] 4:49 [TYR] G:481 [A] ❌ 7DCO_4:49 no longer at interface
B:51 [MET] Q:10 [C] 4:49 [TYR] G:482 [A] ❌ 7DCO_4:49 no longer at interface
B:51 [MET] Q:11 [A] 4:49 [TYR] G:483 [A] ❌ 7DCO_4:49 no longer at interface
B:19 [ASP] Q:9 [G] 4:18 [PRO] G:481 [A] ❌ 7DCO_4:18 no longer at interface
B:80 [LYS] Q:8 [U] 4:79 [ARG] G:480 [A] ❌ 7DCO_4:79 no longer at interface
B:16 [ASN] Q:8 [U] 4:15 [ASN] G:480 [A] ❌ 7DCO_4:15 no longer at interface
B:16 [ASN] Q:9 [G] 4:15 [ASN] G:481 [A] ❌ 7DCO_4:15 no longer at interface
B:49 [MET] Q:9 [G] 4:46 [LEU] G:481 [A] ❌ 7DCO_4:46 no longer at interface
B:42 [ASP] Q:11 [A] 4:37 [ARG] G:483 [A] ❌ 1A9N_B:42 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
RNA-binding domain, RBD 0.58 1.31 0.17 0.7 0.15 0.88 0.83 0.43 0.46 0.07 0.47


Other pairs involving 1A9N_B_Q or 7DCO_4_G

Total number of entries: 23

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1URN_A_P 7DCO_4_G 0.23 0.6 1.36 0.17 RNA-binding domain, RBD compare
1A9N_B_Q 6F4G_B_C 0.94 0.92 0.25 0.79 RNA-binding domain, RBD compare
1A9N_B_Q 7DCO_R_G 0.79 0.68 2.58 0.17 compare
1A9N_B_Q 6SQN_A_X 0.92 0.87 0.86 0.6 RNA-binding domain, RBD compare
1A9N_B_Q 7DCO_4_G 0.43 0.58 1.31 0.17 RNA-binding domain, RBD compare
1A9N_B_Q 6DCL_A_D 0.32 0.6 2.71 0.2 RNA-binding domain, RBD compare
1A9N_B_Q 5WWE_A_B 0.72 0.6 2.34 0.2 RNA-binding domain, RBD compare
1A9N_B_Q 1SJ3_P_R 0.83 0.85 0.49 0.55 RNA-binding domain, RBD compare
1A9N_B_Q 1M5O_C_B 0.86 0.83 0.56 0.43 RNA-binding domain, RBD compare
1A9N_B_Q 1G2E_A_B 0.54 0.62 3.02 0.16 RNA-binding domain, RBD compare
1A9N_B_Q 6F4H_A_B 0.81 0.85 0.49 0.5 RNA-binding domain, RBD compare
1A9N_B_Q 4PR6_A_B 0.81 0.85 0.49 0.54 RNA-binding domain, RBD compare
1A9N_B_Q 7DCO_p_H 0.32 0.68 0.46 0.29 RNA-binding domain, RBD compare
1A9N_B_Q 7DCO_X_G 0.31 0.63 3.58 0.12 RNA-binding domain, RBD compare
1A9N_B_Q 2NZ4_A_P 0.79 0.83 0.54 0.5 RNA-binding domain, RBD compare
1A9N_B_Q 1URN_A_P 0.78 0.85 0.84 0.58 RNA-binding domain, RBD compare
1A9N_B_Q 1DRZ_A_B 0.81 0.85 0.47 0.5 RNA-binding domain, RBD compare
1A9N_B_Q 5DDP_D_A 0.81 0.82 0.42 0.46 RNA-binding domain, RBD compare
1A9N_B_Q 4ED5_A_D 0.54 0.62 2.45 0.1 RNA-binding domain, RBD compare
1A9N_B_Q 4PKD_B_V 0.75 0.85 0.6 0.5 RNA-binding domain, RBD compare
1A9N_B_Q 3MXH_P_R 0.79 0.78 1.0 0.46 RNA-binding domain, RBD compare
6CMN_A_D 7DCO_4_G 0.65 0.58 1.84 0.12 RNA-binding domain, RBD compare
6F4H_A_B 7DCO_4_G 0.35 0.61 1.28 0.17 RNA-binding domain, RBD compare