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All interfaces > All interologs > Interface groups > group141 > 1G2E_A_B vs 6F4G_B_C

Interface analysis


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Common contacts -

1G2E_A
1G2E_B
6F4G_B
6F4G_C
Conserved?
A:84 [PHE] B:9 [U] B:53 [PHE] C:13 [C] ✔
A:84 [PHE] B:10 [U] B:53 [PHE] C:14 [A] ✔
A:44 [ASN] B:8 [U] B:12 [ASN] C:12 [G] ✔
A:116 [ARG] B:9 [U] B:85 [LYS] C:13 [C] ✔
A:118 [SER] B:10 [U] B:87 [ASP] C:14 [A] ✔
A:71 [VAL] B:10 [U] B:43 [LEU] C:14 [A] ✔
A:69 [LYS] B:10 [U] B:41 [VAL] C:14 [A] ✔
A:69 [LYS] B:11 [A] B:41 [VAL] C:15 [G] ✔
A:42 [ILE] B:8 [U] B:10 [TYR] C:12 [G] ✔
A:42 [ILE] B:9 [U] B:10 [TYR] C:13 [C] ✔
A:117 [PRO] B:9 [U] B:86 [SER] C:13 [C] ✔
A:48 [GLN] B:6 [U] B:16 [GLU] C:10 [U] ✔
A:108 [LYS] B:7 [A] B:77 [LYS] C:11 [U] ✔
A:40 [ASN] B:10 [U] B:8 [THR] C:14 [A] ✔
A:115 [ALA] B:9 [U] B:84 [SER] C:13 [C] ✔
A:115 [ALA] B:10 [U] B:84 [SER] C:14 [A] ✔
A:82 [TYR] B:8 [U] B:51 [GLN] C:12 [G] ✔
A:82 [TYR] B:9 [U] B:51 [GLN] C:13 [C] ✔
A:45 [TYR] B:7 [A] B:13 [ASN] C:11 [U] ✔
A:45 [TYR] B:8 [U] B:13 [ASN] C:12 [G] ✔
A:114 [TYR] B:9 [U] B:83 [TYR] C:13 [C] ✔
A:81 [GLY] B:7 [A] B:50 [GLY] C:11 [U] ❌ 6F4G_B_C
A:116 [ARG] B:8 [U] B:85 [LYS] C:12 [G] ❌ 6F4G_B_C
A:118 [SER] B:9 [U] B:87 [ASP] C:13 [C] ❌ 6F4G_B_C
A:74 [LYS] B:11 [A] B:46 [LEU] C:15 [G] ❌ 6F4G_B_C
A:80 [LEU] B:7 [A] B:49 [ARG] C:11 [U] ❌ 6F4G_B_C
A:48 [GLN] B:7 [A] B:16 [GLU] C:11 [U] ❌ 6F4G_B_C
A:108 [LYS] B:6 [U] B:77 [LYS] C:10 [U] ❌ 6F4G_B_C
A:111 [LYS] B:8 [U] B:80 [GLN] C:12 [G] ❌ 6F4G_B_C
A:82 [TYR] B:10 [U] B:51 [GLN] C:14 [A] ❌ 6F4G_B_C
A:79 [SER] B:7 [A] B:48 [MET] C:11 [U] ❌ 6F4G_B_C
A:113 [SER] B:8 [U] B:82 [ALA] C:12 [G] ❌ 6F4G_B_C
A:72 [ARG] B:11 [A] B:44 [LYS] C:15 [G] ❌ 6F4G_B_C
A:44 [ASN] B:7 [A] B:12 [ASN] C:11 [U] ❌ 1G2E_A_B
A:48 [GLN] B:3 [A] B:16 [GLU] C:9 [A] ❌ 1G2E_A_B
A:48 [GLN] B:8 [U] B:16 [GLU] C:12 [G] ❌ 1G2E_A_B
A:71 [VAL] B:11 [A] B:43 [LEU] C:15 [G] ❌ 1G2E_A_B
A:74 [LYS] B:6 [U] B:46 [LEU] C:10 [U] ❌ 1G2E_A_B
A:74 [LYS] B:8 [U] B:46 [LEU] C:12 [G] ❌ 1G2E_A_B
A:79 [SER] B:9 [U] B:48 [MET] C:13 [C] ❌ 1G2E_A_B
A:79 [SER] B:10 [U] B:48 [MET] C:14 [A] ❌ 1G2E_A_B
A:79 [SER] B:8 [U] B:48 [MET] C:12 [G] ❌ 1G2E_A_B
A:80 [LEU] B:6 [U] B:49 [ARG] C:10 [U] ❌ 1G2E_A_B
A:80 [LEU] B:8 [U] B:49 [ARG] C:12 [G] ❌ 1G2E_A_B
A:81 [GLY] B:8 [U] B:50 [GLY] C:12 [G] ❌ 1G2E_A_B
A:111 [LYS] B:7 [A] B:80 [GLN] C:11 [U] ❌ 1G2E_A_B
A:113 [SER] B:9 [U] B:82 [ALA] C:13 [C] ❌ 1G2E_A_B
A:117 [PRO] B:10 [U] B:86 [SER] C:14 [A] ❌ 1G2E_A_B
A:117 [PRO] B:11 [A] B:86 [SER] C:15 [G] ❌ 1G2E_A_B
A:118 [SER] B:11 [A] B:87 [ASP] C:15 [G] ❌ 1G2E_A_B
A:46 [LEU] B:8 [U] B:14 [LEU] C:12 [G] ❌ 1G2E_A:46 no longer at interface
A:86 [ASN] B:10 [U] B:55 [ILE] C:14 [A] ❌ 1G2E_A:86 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
RNA-binding domain, RBD 0.61 3.03 0.15 0.71 0.1 0.65 0.7 0.57 0.59 0.12 0.06


Other pairs involving 1G2E_A_B or 6F4G_B_C

Total number of entries: 25

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1A9N_B_Q 6F4G_B_C 0.94 0.92 0.25 0.79 RNA-binding domain, RBD compare
1A9N_B_Q 1G2E_A_B 0.54 0.62 3.02 0.16 RNA-binding domain, RBD compare
1DRZ_A_B 6F4G_B_C 0.80 0.83 0.38 0.43 RNA-binding domain, RBD compare
1G2E_A_B 6F4G_B_C 0.57 0.61 3.03 0.15 RNA-binding domain, RBD compare
1G2E_A_B 6SQN_A_X 0.55 0.64 3.14 0.1 RNA-binding domain, RBD compare
1G2E_A_B 1URN_A_P 0.54 0.62 3.07 0.1 RNA-binding domain, RBD compare
1G2E_A_B 4ED5_A_D 0.92 0.95 0.7 0.8 RNA-binding domain, RBD compare
1G2E_A_B 6F4H_A_B 0.57 0.64 3.02 0.1 RNA-binding domain, RBD compare
1M5O_C_B 6F4G_B_C 0.81 0.81 0.4 0.5 RNA-binding domain, RBD compare
1SJ3_P_R 6F4G_B_C 0.83 0.83 0.4 0.55 RNA-binding domain, RBD compare
1URN_A_P 6F4G_B_C 0.78 0.85 0.36 0.58 RNA-binding domain, RBD compare
2NZ4_A_P 6F4G_B_C 0.85 0.8 0.45 0.43 RNA-binding domain, RBD compare
3MXH_P_R 6F4G_B_C 0.80 0.77 0.94 0.46 RNA-binding domain, RBD compare
4ED5_A_D 6F4G_B_C 0.57 0.62 2.44 0.1 RNA-binding domain, RBD compare
4N0T_A_B 6F4G_B_C 0.58 0.61 3.62 0.0 RNA-binding domain, RBD compare
4PKD_B_V 6F4G_B_C 0.81 0.81 0.46 0.5 RNA-binding domain, RBD compare
4PR6_A_B 6F4G_B_C 0.80 0.83 0.4 0.46 RNA-binding domain, RBD compare
5DDP_D_A 6F4G_B_C 0.82 0.81 0.36 0.46 RNA-binding domain, RBD compare
5TF6_A_B 6F4G_B_C 0.58 0.61 3.75 0.0 RNA-binding domain, RBD compare
6DCL_A_D 6F4G_B_C 0.32 0.61 2.78 0.26 RNA-binding domain, RBD compare
6F4G_B_C 6F4H_A_B 0.81 0.87 0.36 0.5 RNA-binding domain, RBD compare
6F4G_B_C 7DCO_p_H 0.23 0.65 0.62 0.14 RNA-binding domain, RBD compare
6F4G_B_C 6SQN_A_X 0.91 0.87 0.39 0.6 RNA-binding domain, RBD compare
6F4G_B_C 7DCO_X_G 0.33 0.62 3.54 0.12 RNA-binding domain, RBD compare
6F4G_B_C 7DCO_R_G 0.76 0.68 2.57 0.14 compare