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All interfaces > All interologs > Interface groups > group141 > 1G2E_A_B vs 6F4H_A_B

Interface analysis


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Common contacts -

1G2E_A
1G2E_B
6F4H_A
6F4H_B
Conserved?
A:84 [PHE] B:9 [U] A:53 [PHE] B:11 [C] ✔
A:84 [PHE] B:10 [U] A:53 [PHE] B:12 [A] ✔
A:44 [ASN] B:8 [U] A:12 [ASN] B:10 [G] ✔
A:116 [ARG] B:9 [U] A:85 [LYS] B:11 [C] ✔
A:118 [SER] B:10 [U] A:87 [ASP] B:12 [A] ✔
A:71 [VAL] B:10 [U] A:43 [LEU] B:12 [A] ✔
A:69 [LYS] B:10 [U] A:41 [VAL] B:12 [A] ✔
A:42 [ILE] B:8 [U] A:10 [TYR] B:10 [G] ✔
A:42 [ILE] B:9 [U] A:10 [TYR] B:11 [C] ✔
A:117 [PRO] B:9 [U] A:86 [SER] B:11 [C] ✔
A:48 [GLN] B:6 [U] A:16 [GLU] B:8 [U] ✔
A:108 [LYS] B:7 [A] A:77 [LYS] B:9 [U] ✔
A:40 [ASN] B:10 [U] A:8 [THR] B:12 [A] ✔
A:115 [ALA] B:9 [U] A:84 [SER] B:11 [C] ✔
A:115 [ALA] B:10 [U] A:84 [SER] B:12 [A] ✔
A:82 [TYR] B:8 [U] A:51 [GLN] B:10 [G] ✔
A:82 [TYR] B:9 [U] A:51 [GLN] B:11 [C] ✔
A:45 [TYR] B:7 [A] A:13 [ASN] B:9 [U] ✔
A:45 [TYR] B:8 [U] A:13 [ASN] B:10 [G] ✔
A:114 [TYR] B:9 [U] A:83 [TYR] B:11 [C] ✔
A:81 [GLY] B:7 [A] A:50 [GLY] B:9 [U] ❌ 6F4H_A_B
A:116 [ARG] B:8 [U] A:85 [LYS] B:10 [G] ❌ 6F4H_A_B
A:118 [SER] B:9 [U] A:87 [ASP] B:11 [C] ❌ 6F4H_A_B
A:69 [LYS] B:11 [A] A:41 [VAL] B:14 [C] ❌ 6F4H_A_B
A:74 [LYS] B:11 [A] A:46 [LEU] B:14 [C] ❌ 6F4H_A_B
A:80 [LEU] B:7 [A] A:49 [ARG] B:9 [U] ❌ 6F4H_A_B
A:48 [GLN] B:7 [A] A:16 [GLU] B:9 [U] ❌ 6F4H_A_B
A:108 [LYS] B:6 [U] A:77 [LYS] B:8 [U] ❌ 6F4H_A_B
A:111 [LYS] B:8 [U] A:80 [GLN] B:10 [G] ❌ 6F4H_A_B
A:82 [TYR] B:10 [U] A:51 [GLN] B:12 [A] ❌ 6F4H_A_B
A:79 [SER] B:7 [A] A:48 [MET] B:9 [U] ❌ 6F4H_A_B
A:113 [SER] B:8 [U] A:82 [ALA] B:10 [G] ❌ 6F4H_A_B
A:72 [ARG] B:11 [A] A:44 [LYS] B:14 [C] ❌ 6F4H_A_B
A:44 [ASN] B:7 [A] A:12 [ASN] B:9 [U] ❌ 1G2E_A_B
A:48 [GLN] B:8 [U] A:16 [GLU] B:10 [G] ❌ 1G2E_A_B
A:74 [LYS] B:6 [U] A:46 [LEU] B:8 [U] ❌ 1G2E_A_B
A:74 [LYS] B:8 [U] A:46 [LEU] B:10 [G] ❌ 1G2E_A_B
A:79 [SER] B:10 [U] A:48 [MET] B:12 [A] ❌ 1G2E_A_B
A:79 [SER] B:8 [U] A:48 [MET] B:10 [G] ❌ 1G2E_A_B
A:79 [SER] B:9 [U] A:48 [MET] B:11 [C] ❌ 1G2E_A_B
A:80 [LEU] B:6 [U] A:49 [ARG] B:8 [U] ❌ 1G2E_A_B
A:80 [LEU] B:8 [U] A:49 [ARG] B:10 [G] ❌ 1G2E_A_B
A:81 [GLY] B:8 [U] A:50 [GLY] B:10 [G] ❌ 1G2E_A_B
A:111 [LYS] B:7 [A] A:80 [GLN] B:9 [U] ❌ 1G2E_A_B
A:113 [SER] B:9 [U] A:82 [ALA] B:11 [C] ❌ 1G2E_A_B
A:117 [PRO] B:10 [U] A:86 [SER] B:12 [A] ❌ 1G2E_A_B
A:46 [LEU] B:8 [U] A:14 [LEU] B:10 [G] ❌ 1G2E_A:46 no longer at interface
A:86 [ASN] B:10 [U] A:55 [ILE] B:12 [A] ❌ 1G2E_A:86 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
RNA-binding domain, RBD 0.64 3.02 0.10 0.73 0.07 0.71 0.6 0.57 0.67 0.12 0.07


Other pairs involving 1G2E_A_B or 6F4H_A_B

Total number of entries: 25

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1A9N_B_Q 1G2E_A_B 0.54 0.62 3.02 0.16 RNA-binding domain, RBD compare
1A9N_B_Q 6F4H_A_B 0.81 0.85 0.49 0.5 RNA-binding domain, RBD compare
1DRZ_A_B 6F4H_A_B 0.94 0.95 0.38 0.68 RNA-binding domain, RBD compare
1G2E_A_B 6F4G_B_C 0.57 0.61 3.03 0.15 RNA-binding domain, RBD compare
1G2E_A_B 6SQN_A_X 0.55 0.64 3.14 0.1 RNA-binding domain, RBD compare
1G2E_A_B 1URN_A_P 0.54 0.62 3.07 0.1 RNA-binding domain, RBD compare
1G2E_A_B 4ED5_A_D 0.92 0.95 0.7 0.8 RNA-binding domain, RBD compare
1G2E_A_B 6F4H_A_B 0.57 0.64 3.02 0.1 RNA-binding domain, RBD compare
1M5O_C_B 6F4H_A_B 0.95 0.95 0.48 0.7 RNA-binding domain, RBD compare
1SJ3_P_R 6F4H_A_B 0.97 0.96 0.38 0.71 RNA-binding domain, RBD compare
1URN_A_P 6F4H_A_B 0.95 0.94 0.32 0.72 RNA-binding domain, RBD compare
2NZ4_A_P 6F4H_A_B 0.92 0.95 0.41 0.7 RNA-binding domain, RBD compare
3MXH_P_R 6F4H_A_B 0.95 0.91 0.91 0.59 RNA-binding domain, RBD compare
4ED5_A_D 6F4H_A_B 0.56 0.65 2.49 0.1 RNA-binding domain, RBD compare
4N0T_A_B 6F4H_A_B 0.56 0.64 3.75 0.0 RNA-binding domain, RBD compare
4PKD_B_V 6F4H_A_B 0.88 0.94 0.45 0.65 RNA-binding domain, RBD compare
4PR6_A_B 6F4H_A_B 0.94 0.95 0.38 0.68 RNA-binding domain, RBD compare
5DDP_D_A 6F4H_A_B 0.92 0.96 0.33 0.68 RNA-binding domain, RBD compare
5TF6_A_B 6F4H_A_B 0.57 0.64 3.83 0.0 RNA-binding domain, RBD compare
6DCL_A_D 6F4H_A_B 0.33 0.63 1.94 0.17 RNA-binding domain, RBD compare
6F4G_B_C 6F4H_A_B 0.81 0.87 0.36 0.5 RNA-binding domain, RBD compare
6F4H_A_B 7DCO_4_G 0.35 0.61 1.28 0.17 RNA-binding domain, RBD compare
6F4H_A_B 6SQN_A_X 0.93 0.92 0.38 0.74 RNA-binding domain, RBD compare
6F4H_A_B 7DCO_R_G 0.77 0.7 2.58 0.17 compare
6F4H_A_B 7DCO_X_G 0.43 0.65 2.51 0.12 RNA-binding domain, RBD compare