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All interfaces > All interologs > Interface groups > group141 > 1SJ3_P_R vs 7DCO_R_G

Interface analysis


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Common contacts -

1SJ3_P
1SJ3_R
7DCO_R
7DCO_G
Conserved?
P:13 [TYR] R:151 [G] R:138 [TYR] G:112 [U] ✔
P:13 [TYR] R:152 [C] R:138 [TYR] G:113 [U] ✔
P:91 [SER] R:153 [A] R:230 [PRO] G:114 [U] ✔
P:15 [ASN] R:151 [G] R:140 [GLY] G:112 [U] ✔
P:90 [ASP] R:153 [A] R:229 [ASP] G:114 [U] ✔
P:87 [ALA] R:152 [C] R:226 [ALA] G:113 [U] ✔
P:87 [ALA] R:153 [A] R:226 [ALA] G:114 [U] ✔
P:11 [THR] R:153 [A] R:136 [THR] G:114 [U] ✔
P:88 [LYS] R:152 [C] R:227 [ASN] G:113 [U] ✔
P:6 [THR] R:152 [C] R:124 [MET] G:113 [U] ✔
P:83 [ARG] R:150 [U] R:222 [LEU] G:111 [U] ✔
P:54 [GLN] R:151 [G] R:181 [CYS] G:112 [U] ✔
P:54 [GLN] R:152 [C] R:181 [CYS] G:113 [U] ✔
P:51 [MET] R:151 [G] R:179 [LYS] G:112 [U] ✔
P:51 [MET] R:152 [C] R:179 [LYS] G:113 [U] ✔
P:86 [TYR] R:152 [C] R:225 [TRP] G:113 [U] ✔
P:85 [GLN] R:152 [C] R:224 [LYS] G:113 [U] ✔
P:16 [ASN] R:150 [U] R:141 [GLY] G:111 [U] ✔
P:16 [ASN] R:151 [G] R:141 [GLY] G:112 [U] ✔
P:44 [LEU] R:153 [A] R:174 [ARG] G:114 [U] ✔
P:56 [PHE] R:152 [C] R:183 [PHE] G:113 [U] ✔
P:56 [PHE] R:153 [A] R:183 [PHE] G:114 [U] ✔
P:52 [ARG] R:151 [G] R:180 [ASN] G:112 [U] ✔
P:89 [THR] R:153 [A] R:228 [GLU] G:114 [U] ✔
P:15 [ASN] R:150 [U] R:140 [GLY] G:111 [U] ❌ 7DCO_R_G
P:51 [MET] R:153 [A] R:179 [LYS] G:114 [U] ❌ 7DCO_R_G
P:89 [THR] R:152 [C] R:228 [GLU] G:113 [U] ❌ 7DCO_R_G
P:46 [SER] R:153 [A] R:176 [VAL] G:114 [U] ❌ 1SJ3_P_R
P:48 [SER] R:151 [G] R:178 [SER] G:112 [U] ❌ 1SJ3_P_R
P:83 [ARG] R:151 [G] R:222 [LEU] G:112 [U] ❌ 1SJ3_P_R
P:85 [GLN] R:151 [G] R:224 [LYS] G:112 [U] ❌ 1SJ3_P_R
P:88 [LYS] R:153 [A] R:227 [ASN] G:114 [U] ❌ 1SJ3_P_R
P:19 [GLU] R:149 [U] R:148 [SER] G:110 [U] ❌ 7DCO_R:148, 7DCO_G:110 no longer at interface
P:52 [ARG] R:149 [U] R:180 [ASN] G:110 [U] ❌ 7DCO_G:110 no longer at interface
P:44 [LEU] R:155 [U] R:174 [ARG] G:115 [U] ❌ 1SJ3_R:155 no longer at interface
P:46 [SER] R:155 [U] R:176 [VAL] G:115 [U] ❌ 1SJ3_R:155 no longer at interface
P:91 [SER] R:155 [U] R:230 [PRO] G:115 [U] ❌ 1SJ3_R:155 no longer at interface
P:19 [GLU] R:150 [U] R:148 [SER] G:111 [U] ❌ 7DCO_R:148 no longer at interface
P:19 [GLU] R:151 [G] R:148 [SER] G:112 [U] ❌ 7DCO_R:148 no longer at interface
P:17 [LEU] R:151 [G] R:142 [ILE] G:112 [U] ❌ 7DCO_R:142 no longer at interface
P:58 [ILE] R:153 [A] R:185 [LYS] G:114 [U] ❌ 7DCO_R:185 no longer at interface
P:80 [LYS] R:150 [U] R:218 [GLY] G:111 [U] ❌ 7DCO_R:218 no longer at interface
P:5 [GLU] R:152 [C] R:123 [ASP] G:113 [U] ❌ 1SJ3_P:5 no longer at interface
P:18 [ASN] R:150 [U] R:143 [ASP] G:111 [U] ❌ 1SJ3_P:18 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
0.5 2.55 0.17 0.78 0.12 0.69 0.67 0.76 0.74 0.21 0.60


Other pairs involving 1SJ3_P_R or 7DCO_R_G

Total number of entries: 20

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1A9N_B_Q 7DCO_R_G 0.79 0.68 2.58 0.17 compare
1A9N_B_Q 1SJ3_P_R 0.83 0.85 0.49 0.55 RNA-binding domain, RBD compare
1DRZ_A_B 7DCO_R_G 0.76 0.51 2.54 0.17 compare
1DRZ_A_B 1SJ3_P_R 0.97 0.95 0.31 0.97 RNA-binding domain, RBD compare
1M5O_C_B 1SJ3_P_R 0.96 0.69 0.42 0.91 RNA-binding domain, RBD compare
1SJ3_P_R 7DCO_R_G 0.76 0.5 2.55 0.17 compare
1SJ3_P_R 6F4G_B_C 0.83 0.83 0.4 0.55 RNA-binding domain, RBD compare
1SJ3_P_R 6F4H_A_B 0.97 0.96 0.38 0.71 RNA-binding domain, RBD compare
1SJ3_P_R 5DDP_D_A 0.97 0.72 0.57 0.82 RNA-binding domain, RBD compare
1SJ3_P_R 4PR6_A_B 0.97 0.95 0.29 0.97 RNA-binding domain, RBD compare
1SJ3_P_R 3MXH_P_R 0.95 0.64 1.0 0.78 RNA-binding domain, RBD compare
1SJ3_P_R 4PKD_B_V 0.95 0.66 0.28 0.82 RNA-binding domain, RBD compare
1SJ3_P_R 2NZ4_A_P 0.94 0.65 0.37 0.91 RNA-binding domain, RBD compare
1SJ3_P_R 1URN_A_P 0.98 0.94 0.52 0.91 RNA-binding domain, RBD compare
1URN_A_P 7DCO_R_G 0.75 0.7 2.57 0.21 compare
4PR6_A_B 7DCO_R_G 0.75 0.51 2.49 0.17 compare
5DDP_D_A 7DCO_R_G 0.74 0.54 2.57 0.21 compare
6F4G_B_C 7DCO_R_G 0.76 0.68 2.57 0.14 compare
6F4H_A_B 7DCO_R_G 0.77 0.7 2.58 0.17 compare
6SQN_A_X 7DCO_R_G 0.73 0.72 2.65 0.17 compare