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All interfaces > All interologs > Interface groups > group141 > 1URN_A_P vs 7DCO_R_G

Interface analysis


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Licorice
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Common contacts -

1URN_A
1URN_P
7DCO_R
7DCO_G
Conserved?
A:5 [GLU] P:10 [C] R:124 [MET] G:113 [U] ✔
A:13 [TYR] P:9 [G] R:138 [TYR] G:112 [U] ✔
A:13 [TYR] P:10 [C] R:138 [TYR] G:113 [U] ✔
A:91 [SER] P:11 [A] R:230 [PRO] G:114 [U] ✔
A:15 [ASN] P:9 [G] R:140 [GLY] G:112 [U] ✔
A:90 [ASP] P:11 [A] R:229 [ASP] G:114 [U] ✔
A:87 [ALA] P:10 [C] R:226 [ALA] G:113 [U] ✔
A:87 [ALA] P:11 [A] R:226 [ALA] G:114 [U] ✔
A:11 [THR] P:11 [A] R:136 [THR] G:114 [U] ✔
A:88 [LYS] P:10 [C] R:227 [ASN] G:113 [U] ✔
A:83 [ARG] P:8 [U] R:222 [LEU] G:111 [U] ✔
A:54 [GLN] P:9 [G] R:181 [CYS] G:112 [U] ✔
A:54 [GLN] P:10 [C] R:181 [CYS] G:113 [U] ✔
A:51 [MET] P:9 [G] R:179 [LYS] G:112 [U] ✔
A:51 [MET] P:10 [C] R:179 [LYS] G:113 [U] ✔
A:86 [TYR] P:10 [C] R:225 [TRP] G:113 [U] ✔
A:85 [GLN] P:10 [C] R:224 [LYS] G:113 [U] ✔
A:16 [ASN] P:8 [U] R:141 [GLY] G:111 [U] ✔
A:16 [ASN] P:9 [G] R:141 [GLY] G:112 [U] ✔
A:44 [LEU] P:11 [A] R:174 [ARG] G:114 [U] ✔
A:56 [PHE] P:10 [C] R:183 [PHE] G:113 [U] ✔
A:56 [PHE] P:11 [A] R:183 [PHE] G:114 [U] ✔
A:52 [ARG] P:9 [G] R:180 [ASN] G:112 [U] ✔
A:89 [THR] P:11 [A] R:228 [GLU] G:114 [U] ✔
A:15 [ASN] P:8 [U] R:140 [GLY] G:111 [U] ❌ 7DCO_R_G
A:51 [MET] P:11 [A] R:179 [LYS] G:114 [U] ❌ 7DCO_R_G
A:89 [THR] P:10 [C] R:228 [GLU] G:113 [U] ❌ 7DCO_R_G
A:44 [LEU] P:13 [U] R:174 [ARG] G:115 [U] ❌ 1URN_A_P
A:48 [SER] P:9 [G] R:178 [SER] G:112 [U] ❌ 1URN_A_P
A:83 [ARG] P:9 [G] R:222 [LEU] G:112 [U] ❌ 1URN_A_P
A:85 [GLN] P:9 [G] R:224 [LYS] G:112 [U] ❌ 1URN_A_P
A:88 [LYS] P:11 [A] R:227 [ASN] G:114 [U] ❌ 1URN_A_P
A:91 [SER] P:13 [U] R:230 [PRO] G:115 [U] ❌ 1URN_A_P
A:19 [GLU] P:7 [U] R:148 [SER] G:110 [U] ❌ 7DCO_R:148, 7DCO_G:110 no longer at interface
A:52 [ARG] P:7 [U] R:180 [ASN] G:110 [U] ❌ 7DCO_G:110 no longer at interface
A:19 [GLU] P:8 [U] R:148 [SER] G:111 [U] ❌ 7DCO_R:148 no longer at interface
A:19 [GLU] P:9 [G] R:148 [SER] G:112 [U] ❌ 7DCO_R:148 no longer at interface
A:17 [LEU] P:9 [G] R:142 [ILE] G:112 [U] ❌ 7DCO_R:142 no longer at interface
A:80 [LYS] P:8 [U] R:218 [GLY] G:111 [U] ❌ 7DCO_R:218 no longer at interface
A:92 [ASP] P:13 [U] R:234 [ALA] G:115 [U] ❌ 7DCO_R:234 no longer at interface
A:4 [PRO] P:10 [C] R:123 [ASP] G:113 [U] ❌ 1URN_A:4 no longer at interface
A:18 [ASN] P:8 [U] R:143 [ASP] G:111 [U] ❌ 1URN_A:18 no longer at interface
A:46 [SER] P:13 [U] R:176 [VAL] G:115 [U] ❌ 1URN_A:46 no longer at interface
A:46 [SER] P:11 [A] R:176 [VAL] G:114 [U] ❌ 1URN_A:46 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
0.7 2.57 0.21 0.78 0.13 0.66 0.83 0.75 0.69 0.21 0.55


Other pairs involving 1URN_A_P or 7DCO_R_G

Total number of entries: 27

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1A9N_B_Q 7DCO_R_G 0.79 0.68 2.58 0.17 compare
1A9N_B_Q 1URN_A_P 0.78 0.85 0.84 0.58 RNA-binding domain, RBD compare
1DRZ_A_B 7DCO_R_G 0.76 0.51 2.54 0.17 compare
1DRZ_A_B 1URN_A_P 0.93 0.95 0.28 0.83 RNA-binding domain, RBD compare
1G2E_A_B 1URN_A_P 0.54 0.62 3.07 0.1 RNA-binding domain, RBD compare
1M5O_C_B 1URN_A_P 0.96 0.93 0.59 0.93 RNA-binding domain, RBD compare
1SJ3_P_R 7DCO_R_G 0.76 0.5 2.55 0.17 compare
1SJ3_P_R 1URN_A_P 0.98 0.94 0.52 0.91 RNA-binding domain, RBD compare
1URN_A_P 5HO4_A_B 0.68 0.59 2.13 0.0 RNA-binding domain, RBD compare
1URN_A_P 4PKD_B_V 0.93 0.92 0.29 0.83 RNA-binding domain, RBD compare
1URN_A_P 4N0T_A_B 0.55 0.62 3.78 0.0 RNA-binding domain, RBD compare
1URN_A_P 7DCO_4_G 0.23 0.6 1.36 0.17 RNA-binding domain, RBD compare
1URN_A_P 5TF6_A_B 0.54 0.62 3.87 0.0 RNA-binding domain, RBD compare
1URN_A_P 5DDP_D_A 0.97 0.95 0.36 0.83 RNA-binding domain, RBD compare
1URN_A_P 7DCO_R_G 0.75 0.7 2.57 0.21 compare
1URN_A_P 6F4G_B_C 0.78 0.85 0.36 0.58 RNA-binding domain, RBD compare
1URN_A_P 6DCL_A_D 0.33 0.61 1.95 0.17 RNA-binding domain, RBD compare
1URN_A_P 2NZ4_A_P 0.94 0.92 0.36 0.83 RNA-binding domain, RBD compare
1URN_A_P 7DCO_X_G 0.42 0.64 2.53 0.12 RNA-binding domain, RBD compare
1URN_A_P 4PR6_A_B 0.93 0.94 0.27 0.83 RNA-binding domain, RBD compare
1URN_A_P 6F4H_A_B 0.95 0.94 0.32 0.72 RNA-binding domain, RBD compare
1URN_A_P 3MXH_P_R 0.97 0.87 0.95 0.78 RNA-binding domain, RBD compare
4PR6_A_B 7DCO_R_G 0.75 0.51 2.49 0.17 compare
5DDP_D_A 7DCO_R_G 0.74 0.54 2.57 0.21 compare
6F4G_B_C 7DCO_R_G 0.76 0.68 2.57 0.14 compare
6F4H_A_B 7DCO_R_G 0.77 0.7 2.58 0.17 compare
6SQN_A_X 7DCO_R_G 0.73 0.72 2.65 0.17 compare