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All interfaces > All interologs > Interface groups > group141 > 2NZ4_A_P vs 6SQN_A_X

Interface analysis


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Common contacts -

2NZ4_A
2NZ4_P
6SQN_A
6SQN_X
Conserved?
A:19 [GLU] P:17B [A] A:19 [GLU] X:6 [A] ✔
A:19 [GLU] P:17C [U] A:19 [GLU] X:7 [U] ✔
A:19 [GLU] P:17D [U] A:19 [GLU] X:8 [U] ✔
A:19 [GLU] P:17E [G] A:19 [GLU] X:9 [G] ✔
A:13 [TYR] P:17E [G] A:13 [TYR] X:9 [G] ✔
A:13 [TYR] P:17F [C] A:13 [TYR] X:10 [C] ✔
A:91 [SER] P:17G [A] A:91 [SER] X:11 [A] ✔
A:91 [SER] P:17H [C] A:91 [SER] X:12 [C] ✔
A:15 [ASN] P:17D [U] A:15 [ASN] X:8 [U] ✔
A:15 [ASN] P:17E [G] A:15 [ASN] X:9 [G] ✔
A:90 [ASP] P:17G [A] A:90 [ASP] X:11 [A] ✔
A:90 [ASP] P:17H [C] A:90 [ASP] X:12 [C] ✔
A:87 [ALA] P:17F [C] A:87 [ALA] X:10 [C] ✔
A:87 [ALA] P:17G [A] A:87 [ALA] X:11 [A] ✔
A:17 [LEU] P:17E [G] A:17 [LEU] X:9 [G] ✔
A:11 [THR] P:17G [A] A:11 [THR] X:11 [A] ✔
A:88 [LYS] P:17F [C] A:88 [LYS] X:10 [C] ✔
A:49 [LEU] P:17B [A] A:49 [LEU] X:6 [A] ✔
A:49 [LEU] P:17C [U] A:49 [LEU] X:7 [U] ✔
A:49 [LEU] P:17E [G] A:49 [LEU] X:9 [G] ✔
A:49 [LEU] P:17L [G] A:49 [LEU] X:16 [G] ✔
A:22 [LYS] P:13 [G] A:22 [LYS] X:1 [A] ✔
A:22 [LYS] P:14 [C] A:22 [LYS] X:2 [A] ✔
A:53 [GLY] P:17E [G] A:53 [GLY] X:9 [G] ✔
A:54 [GLN] P:17E [G] A:54 [GLN] X:9 [G] ✔
A:54 [GLN] P:17F [C] A:54 [GLN] X:10 [C] ✔
A:48 [SER] P:17L [G] A:48 [SER] X:16 [G] ✔
A:51 [MET] P:17E [G] A:51 [MET] X:9 [G] ✔
A:51 [MET] P:17G [A] A:51 [MET] X:11 [A] ✔
A:86 [TYR] P:17F [C] A:86 [TYR] X:10 [C] ✔
A:85 [GLN] P:17F [C] A:85 [GLN] X:10 [C] ✔
A:80 [LYS] P:17D [U] A:80 [LYS] X:8 [U] ✔
A:16 [ASN] P:17D [U] A:16 [ASN] X:8 [U] ✔
A:16 [ASN] P:17E [G] A:16 [ASN] X:9 [G] ✔
A:44 [LEU] P:17G [A] A:44 [LEU] X:11 [A] ✔
A:44 [LEU] P:17H [C] A:44 [LEU] X:12 [C] ✔
A:56 [PHE] P:17F [C] A:56 [TRP] X:10 [C] ✔
A:56 [PHE] P:17G [A] A:56 [TRP] X:11 [A] ✔
A:92 [ASP] P:17H [C] A:92 [ASP] X:12 [C] ✔
A:52 [ARG] P:17B [A] A:52 [ARG] X:6 [A] ✔
A:52 [ARG] P:17C [U] A:52 [ARG] X:7 [U] ✔
A:52 [ARG] P:17E [G] A:52 [ARG] X:9 [G] ✔
A:52 [ARG] P:17L [G] A:52 [ARG] X:16 [G] ✔
A:89 [THR] P:17G [A] A:89 [THR] X:11 [A] ✔
A:89 [THR] P:17H [C] A:89 [THR] X:12 [C] ✔
A:93 [ILE] P:17H [C] A:93 [ILE] X:12 [C] ✔
A:50 [LYS] P:17E [G] A:50 [LYS] X:9 [G] ✔
A:51 [MET] P:17F [C] A:51 [MET] X:10 [C] ❌ 6SQN_A_X
A:89 [THR] P:17F [C] A:89 [THR] X:10 [C] ❌ 6SQN_A_X
A:50 [LYS] P:17L [G] A:50 [LYS] X:16 [G] ❌ 6SQN_A_X
A:50 [LYS] P:17F [C] A:50 [LYS] X:10 [C] ❌ 2NZ4_A_P
A:20 [LYS] P:15 [A] A:20 [LYS] X:3 [U] ❌ 6SQN_A:20, 6SQN_X:3 no longer at interface
A:20 [LYS] P:16 [C] A:20 [LYS] X:4 [C] ❌ 6SQN_A:20, 6SQN_X:4 no longer at interface
A:20 [LYS] P:14 [C] A:20 [LYS] X:2 [A] ❌ 6SQN_A:20 no longer at interface
A:47 [ARG] P:13 [G] A:47 [ARG] X:1 [A] ❌ 6SQN_A:47 no longer at interface
A:47 [ARG] P:14 [C] A:47 [ARG] X:2 [A] ❌ 6SQN_A:47 no longer at interface
A:47 [ARG] P:17L [G] A:47 [ARG] X:16 [G] ❌ 6SQN_A:47 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
RNA-binding domain, RBD 0.93 0.39 0.80 0.99 0.54 0.96 1.0 0.96 0.97 0.05 0.60


Other pairs involving 2NZ4_A_P or 6SQN_A_X

Total number of entries: 27

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1DRZ_A_B 2NZ4_A_P 0.97 0.65 0.35 0.93 RNA-binding domain, RBD compare
1DRZ_A_B 6SQN_A_X 0.95 0.96 0.29 0.89 RNA-binding domain, RBD compare
6F4G_B_C 6SQN_A_X 0.91 0.87 0.39 0.6 RNA-binding domain, RBD compare
4ED5_A_D 6SQN_A_X 0.55 0.65 2.53 0.1 RNA-binding domain, RBD compare
1G2E_A_B 6SQN_A_X 0.55 0.64 3.14 0.1 RNA-binding domain, RBD compare
1URN_A_P 2NZ4_A_P 0.94 0.92 0.36 0.83 RNA-binding domain, RBD compare
4PR6_A_B 6SQN_A_X 0.95 0.96 0.3 0.89 RNA-binding domain, RBD compare
3MXH_P_R 6SQN_A_X 0.91 0.88 0.96 0.7 RNA-binding domain, RBD compare
1A9N_B_Q 6SQN_A_X 0.92 0.87 0.86 0.6 RNA-binding domain, RBD compare
1A9N_B_Q 2NZ4_A_P 0.79 0.83 0.54 0.5 RNA-binding domain, RBD compare
6SQN_A_X 7DCO_R_G 0.73 0.72 2.65 0.17 compare
6SQN_A_X 7DCO_X_G 0.45 0.66 2.52 0.12 RNA-binding domain, RBD compare
5TF6_A_B 6SQN_A_X 0.56 0.63 2.54 0.1 RNA-binding domain, RBD compare
1M5O_C_B 6SQN_A_X 0.99 0.95 0.55 0.93 RNA-binding domain, RBD compare
1M5O_C_B 2NZ4_A_P 0.97 0.63 0.49 0.86 RNA-binding domain, RBD compare
6DCL_A_D 6SQN_A_X 0.28 0.63 1.96 0.13 RNA-binding domain, RBD compare
4N0T_A_B 6SQN_A_X 0.59 0.65 3.87 0.0 RNA-binding domain, RBD compare
4PKD_B_V 6SQN_A_X 0.96 0.94 0.34 0.8 RNA-binding domain, RBD compare
2NZ4_A_P 4PKD_B_V 0.94 0.52 0.55 0.69 RNA-binding domain, RBD compare
2NZ4_A_P 3MXH_P_R 0.94 0.6 0.92 0.81 RNA-binding domain, RBD compare
2NZ4_A_P 6F4G_B_C 0.85 0.8 0.45 0.43 RNA-binding domain, RBD compare
2NZ4_A_P 5DDP_D_A 0.96 0.73 0.46 0.85 RNA-binding domain, RBD compare
2NZ4_A_P 4PR6_A_B 0.96 0.66 0.34 0.85 RNA-binding domain, RBD compare
2NZ4_A_P 6F4H_A_B 0.92 0.95 0.41 0.7 RNA-binding domain, RBD compare
2NZ4_A_P 6SQN_A_X 0.96 0.93 0.39 0.8 RNA-binding domain, RBD compare
1SJ3_P_R 2NZ4_A_P 0.94 0.65 0.37 0.91 RNA-binding domain, RBD compare
6F4H_A_B 6SQN_A_X 0.93 0.92 0.38 0.74 RNA-binding domain, RBD compare