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All interfaces > All interologs > Interface groups > group141 > 3MXH_P_R vs 6SQN_A_X

Interface analysis


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Common contacts -

3MXH_P
3MXH_R
6SQN_A
6SQN_X
Conserved?
P:19 [GLU] R:660 [A] A:19 [GLU] X:6 [A] ✔
P:19 [GLU] R:661 [U] A:19 [GLU] X:7 [U] ✔
P:19 [GLU] R:662 [U] A:19 [GLU] X:8 [U] ✔
P:19 [GLU] R:663 [G] A:19 [GLU] X:9 [G] ✔
P:13 [TYR] R:663 [G] A:13 [TYR] X:9 [G] ✔
P:13 [TYR] R:664 [C] A:13 [TYR] X:10 [C] ✔
P:91 [SER] R:666 [C] A:92 [ASP] X:12 [C] ✔
P:15 [ASN] R:662 [U] A:15 [ASN] X:8 [U] ✔
P:15 [ASN] R:663 [G] A:15 [ASN] X:9 [G] ✔
P:90 [ASP] R:665 [A] A:91 [SER] X:11 [A] ✔
P:90 [ASP] R:666 [C] A:91 [SER] X:12 [C] ✔
P:87 [ALA] R:664 [C] A:87 [ALA] X:10 [C] ✔
P:87 [ALA] R:665 [A] A:87 [ALA] X:11 [A] ✔
P:17 [LEU] R:663 [G] A:17 [LEU] X:9 [G] ✔
P:11 [THR] R:665 [A] A:11 [THR] X:11 [A] ✔
P:88 [LYS] R:665 [A] A:89 [THR] X:11 [A] ✔
P:49 [LEU] R:75 [G] A:49 [LEU] X:16 [G] ✔
P:49 [LEU] R:660 [A] A:49 [LEU] X:6 [A] ✔
P:49 [LEU] R:661 [U] A:49 [LEU] X:7 [U] ✔
P:49 [LEU] R:663 [G] A:49 [LEU] X:9 [G] ✔
P:22 [LYS] R:61 [A] A:22 [LYS] X:1 [A] ✔
P:22 [LYS] R:62 [A] A:22 [LYS] X:2 [A] ✔
P:53 [GLY] R:663 [G] A:53 [GLY] X:9 [G] ✔
P:54 [GLN] R:663 [G] A:54 [GLN] X:9 [G] ✔
P:54 [GLN] R:664 [C] A:54 [GLN] X:10 [C] ✔
P:48 [SER] R:75 [G] A:48 [SER] X:16 [G] ✔
P:51 [MET] R:663 [G] A:51 [MET] X:9 [G] ✔
P:51 [MET] R:665 [A] A:51 [MET] X:11 [A] ✔
P:86 [TYR] R:664 [C] A:86 [TYR] X:10 [C] ✔
P:85 [GLN] R:664 [C] A:85 [GLN] X:10 [C] ✔
P:80 [LYS] R:662 [U] A:80 [LYS] X:8 [U] ✔
P:16 [ASN] R:662 [U] A:16 [ASN] X:8 [U] ✔
P:16 [ASN] R:663 [G] A:16 [ASN] X:9 [G] ✔
P:44 [LEU] R:665 [A] A:44 [LEU] X:11 [A] ✔
P:44 [LEU] R:666 [C] A:44 [LEU] X:12 [C] ✔
P:56 [PHE] R:664 [C] A:56 [TRP] X:10 [C] ✔
P:56 [PHE] R:665 [A] A:56 [TRP] X:11 [A] ✔
P:92 [ASP] R:666 [C] A:93 [ILE] X:12 [C] ✔
P:52 [ARG] R:75 [G] A:52 [ARG] X:16 [G] ✔
P:52 [ARG] R:660 [A] A:52 [ARG] X:6 [A] ✔
P:52 [ARG] R:661 [U] A:52 [ARG] X:7 [U] ✔
P:52 [ARG] R:663 [G] A:52 [ARG] X:9 [G] ✔
P:89 [THR] R:665 [A] A:90 [ASP] X:11 [A] ✔
P:89 [THR] R:666 [C] A:90 [ASP] X:12 [C] ✔
P:50 [LYS] R:663 [G] A:50 [LYS] X:9 [G] ✔
P:50 [LYS] R:664 [C] A:50 [LYS] X:10 [C] ✔
P:88 [LYS] R:664 [C] A:89 [THR] X:10 [C] ❌ 6SQN_A_X
P:51 [MET] R:664 [C] A:51 [MET] X:10 [C] ❌ 6SQN_A_X
P:50 [LYS] R:665 [A] A:50 [LYS] X:11 [A] ❌ 6SQN_A_X
P:88 [LYS] R:666 [C] A:89 [THR] X:12 [C] ❌ 3MXH_P_R
P:20 [LYS] R:63 [A] A:20 [LYS] X:3 [U] ❌ 6SQN_A:20, 6SQN_X:3 no longer at interface
P:20 [LYS] R:64 [C] A:20 [LYS] X:4 [C] ❌ 6SQN_A:20, 6SQN_X:4 no longer at interface
P:20 [LYS] R:62 [A] A:20 [LYS] X:2 [A] ❌ 6SQN_A:20 no longer at interface
P:47 [ARG] R:62 [A] A:47 [ARG] X:2 [A] ❌ 6SQN_A:47 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
RNA-binding domain, RBD 0.88 0.96 0.70 0.97 0.44 0.93 1.0 0.91 0.84 0.50 0.50


Other pairs involving 3MXH_P_R or 6SQN_A_X

Total number of entries: 27

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1DRZ_A_B 3MXH_P_R 0.92 0.65 0.96 0.78 RNA-binding domain, RBD compare
1URN_A_P 3MXH_P_R 0.97 0.87 0.95 0.78 RNA-binding domain, RBD compare
1A9N_B_Q 3MXH_P_R 0.79 0.78 1.0 0.46 RNA-binding domain, RBD compare
1M5O_C_B 3MXH_P_R 0.94 0.68 1.06 0.81 RNA-binding domain, RBD compare
2NZ4_A_P 3MXH_P_R 0.94 0.6 0.92 0.81 RNA-binding domain, RBD compare
1SJ3_P_R 3MXH_P_R 0.95 0.64 1.0 0.78 RNA-binding domain, RBD compare
3MXH_P_R 4PKD_B_V 0.84 0.6 0.68 0.69 RNA-binding domain, RBD compare
3MXH_P_R 4PR6_A_B 0.93 0.65 0.96 0.78 RNA-binding domain, RBD compare
3MXH_P_R 5DDP_D_A 0.95 0.68 0.89 0.69 RNA-binding domain, RBD compare
3MXH_P_R 6F4G_B_C 0.80 0.77 0.94 0.46 RNA-binding domain, RBD compare
3MXH_P_R 6F4H_A_B 0.95 0.91 0.91 0.59 RNA-binding domain, RBD compare
1DRZ_A_B 6SQN_A_X 0.95 0.96 0.29 0.89 RNA-binding domain, RBD compare
6F4G_B_C 6SQN_A_X 0.91 0.87 0.39 0.6 RNA-binding domain, RBD compare
4ED5_A_D 6SQN_A_X 0.55 0.65 2.53 0.1 RNA-binding domain, RBD compare
1G2E_A_B 6SQN_A_X 0.55 0.64 3.14 0.1 RNA-binding domain, RBD compare
4PR6_A_B 6SQN_A_X 0.95 0.96 0.3 0.89 RNA-binding domain, RBD compare
3MXH_P_R 6SQN_A_X 0.91 0.88 0.96 0.7 RNA-binding domain, RBD compare
1A9N_B_Q 6SQN_A_X 0.92 0.87 0.86 0.6 RNA-binding domain, RBD compare
5TF6_A_B 6SQN_A_X 0.56 0.63 2.54 0.1 RNA-binding domain, RBD compare
1M5O_C_B 6SQN_A_X 0.99 0.95 0.55 0.93 RNA-binding domain, RBD compare
6DCL_A_D 6SQN_A_X 0.28 0.63 1.96 0.13 RNA-binding domain, RBD compare
4N0T_A_B 6SQN_A_X 0.59 0.65 3.87 0.0 RNA-binding domain, RBD compare
4PKD_B_V 6SQN_A_X 0.96 0.94 0.34 0.8 RNA-binding domain, RBD compare
2NZ4_A_P 6SQN_A_X 0.96 0.93 0.39 0.8 RNA-binding domain, RBD compare
6F4H_A_B 6SQN_A_X 0.93 0.92 0.38 0.74 RNA-binding domain, RBD compare
6SQN_A_X 7DCO_R_G 0.73 0.72 2.65 0.17 compare
6SQN_A_X 7DCO_X_G 0.45 0.66 2.52 0.12 RNA-binding domain, RBD compare