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All interfaces > All interologs > Interface groups > group141 > 6CMN_A_D vs 6XH3_A_D

Interface analysis


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Common contacts -

6CMN_A
6CMN_D
6XH3_A
6XH3_D
Conserved?
A:23 [LYS] D:22 [A] A:23 [LYS] D:22 [A] ✔
A:13 [TYR] D:35 [A] A:13 [TYR] D:35 [A] ✔
A:19 [SER] D:24 [C] A:19 [SER] D:24 [C] ✔
A:15 [ASN] D:35 [A] A:15 [ASN] D:35 [A] ✔
A:87 [ALA] D:35 [A] A:87 [ALA] D:35 [A] ✔
A:50 [THR] D:34 [G] A:50 [ARG] D:34 [G] ✔
A:88 [LYS] D:35 [A] A:88 [LYS] D:35 [A] ✔
A:22 [LYS] D:25 [U] A:22 [LYS] D:25 [U] ✔
A:48 [GLN] D:23 [U] A:48 [THR] D:23 [U] ✔
A:54 [GLN] D:34 [G] A:54 [GLN] D:34 [G] ✔
A:54 [GLN] D:35 [A] A:54 [GLN] D:35 [A] ✔
A:54 [GLN] D:36 [G] A:54 [GLN] D:36 [G] ✔
A:51 [PRO] D:24 [C] A:51 [PRO] D:24 [C] ✔
A:86 [TYR] D:35 [A] A:86 [TYR] D:35 [A] ✔
A:85 [GLN] D:35 [A] A:85 [GLN] D:35 [A] ✔
A:20 [LYS] D:24 [C] A:20 [LYS] D:24 [C] ✔
A:56 [PHE] D:35 [A] A:56 [PHE] D:35 [A] ✔
A:49 [ARG] D:23 [U] A:49 [ARG] D:23 [U] ✔
A:49 [ARG] D:27 [A] A:49 [ARG] D:27 [A] ✔
A:49 [ARG] D:28 [G] A:49 [ARG] D:28 [G] ✔
A:49 [ARG] D:29 [C] A:49 [ARG] D:29 [C] ✔
A:49 [ARG] D:36 [G] A:49 [ARG] D:36 [G] ✔
A:49 [ARG] D:37 [C] A:49 [ARG] D:37 [C] ✔
A:47 [ARG] D:22 [A] A:47 [ARG] D:22 [A] ✔
A:47 [ARG] D:23 [U] A:47 [ARG] D:23 [U] ✔
A:47 [ARG] D:26 [G] A:47 [ARG] D:26 [G] ✔
A:23 [LYS] D:23 [U] A:23 [LYS] D:23 [U] ❌ 6XH3_A_D
A:48 [GLN] D:35 [A] A:48 [THR] D:35 [A] ❌ 6XH3_A_D
A:48 [GLN] D:36 [G] A:48 [THR] D:36 [G] ❌ 6XH3_A_D
A:52 [ARG] D:29 [C] A:52 [ARG] D:29 [C] ❌ 6XH3_A_D
A:52 [ARG] D:34 [G] A:52 [ARG] D:34 [G] ❌ 6XH3_A_D
A:52 [ARG] D:36 [G] A:52 [ARG] D:36 [G] ❌ 6XH3_A_D
A:50 [THR] D:36 [G] A:50 [ARG] D:36 [G] ❌ 6CMN_A_D
A:50 [THR] D:29 [C] A:50 [ARG] D:29 [C] ❌ 6CMN_A_D
A:52 [ARG] D:23 [U] A:52 [ARG] D:23 [U] ❌ 6CMN_A_D
A:52 [ARG] D:22 [A] A:52 [ARG] D:22 [A] ❌ 6CMN_A_D
A:47 [ARG] D:39 [C] A:47 [ARG] D:39 [C] ❌ 6XH3_D:39 no longer at interface
A:23 [LYS] D:21 [G] A:23 [LYS] D:21 [G] ❌ 6CMN_D:21 no longer at interface
A:49 [ARG] D:38 [U] A:49 [ARG] D:38 [U] ❌ 6CMN_D:38 no longer at interface
A:50 [THR] D:30 [C] A:50 [ARG] D:30 [C] ❌ 6CMN_D:30 no longer at interface
A:6 [THR] D:35 [A] A:6 [THR] D:35 [A] ❌ 6XH3_A:6 no longer at interface
A:21 [ILE] D:24 [C] A:21 [ILE] D:24 [C] ❌ 6CMN_A:21 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
RNA-binding domain, RBD 0.97 1.27 0.84 0.98 0.69 0.95 0.92 0.80 0.80 0.60 0.38


Other pairs involving 6CMN_A_D or 6XH3_A_D

Total number of entries: 7

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6XH2_A_D 6XH3_A_D 0.81 0.98 1.26 0.89 RNA-binding domain, RBD compare
6XH3_A_D 7DCO_X_G 0.50 0.63 1.21 0.0 RNA-binding domain, RBD compare
6CMN_A_D 6XH3_A_D 0.80 0.97 1.27 0.84 RNA-binding domain, RBD compare
6CMN_A_D 6XH2_A_D 0.99 0.99 0.17 0.95 RNA-binding domain, RBD compare
6CMN_A_D 7DCO_X_G 0.53 0.62 1.23 0.0 RNA-binding domain, RBD compare
6CMN_A_D 6DCL_A_D 0.48 0.61 1.72 0.16 RNA-binding domain, RBD compare
6CMN_A_D 7DCO_4_G 0.65 0.58 1.84 0.12 RNA-binding domain, RBD compare