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All interfaces > All interologs > Interface groups > group141 > 6CMN_A_D vs 7DCO_4_G

Interface analysis


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Common contacts -

6CMN_A
6CMN_D
7DCO_4
7DCO_G
Conserved?
A:13 [TYR] D:35 [A] 4:12 [TYR] G:481 [A] ✔
A:87 [ALA] D:35 [A] 4:86 [VAL] G:481 [A] ✔
A:48 [GLN] D:36 [G] 4:43 [ASP] G:482 [A] ✔
A:54 [GLN] D:35 [A] 4:52 [TYR] G:481 [A] ✔
A:54 [GLN] D:36 [G] 4:52 [TYR] G:482 [A] ✔
A:86 [TYR] D:35 [A] 4:85 [GLN] G:481 [A] ✔
A:85 [GLN] D:35 [A] 4:84 [ARG] G:481 [A] ✔
A:56 [PHE] D:35 [A] 4:54 [PHE] G:481 [A] ✔
A:52 [ARG] D:36 [G] 4:50 [GLN] G:482 [A] ✔
A:48 [GLN] D:35 [A] 4:43 [ASP] G:481 [A] ❌ 7DCO_4_G
A:54 [GLN] D:34 [G] 4:52 [TYR] G:480 [A] ❌ 7DCO_4_G
A:52 [ARG] D:34 [G] 4:50 [GLN] G:480 [A] ❌ 7DCO_4_G
A:52 [ARG] D:35 [A] 4:50 [GLN] G:481 [A] ❌ 6CMN_A_D
A:85 [GLN] D:34 [G] 4:84 [ARG] G:480 [A] ❌ 6CMN_A_D
A:47 [ARG] D:39 [C] 4:42 [LYS] G:486 [A] ❌ 7DCO_G:486 no longer at interface
A:85 [GLN] D:33 [G] 4:84 [ARG] G:479 [A] ❌ 6CMN_D:33 no longer at interface
A:15 [ASN] D:35 [A] 4:14 [GLY] G:481 [A] ❌ 7DCO_4:14 no longer at interface
A:50 [THR] D:34 [G] 4:48 [ALA] G:480 [A] ❌ 7DCO_4:48 no longer at interface
A:49 [ARG] D:36 [G] 4:46 [LEU] G:482 [A] ❌ 7DCO_4:46 no longer at interface
A:46 [PRO] D:36 [G] 4:41 [PRO] G:482 [A] ❌ 6CMN_A:46 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
RNA-binding domain, RBD 0.58 1.84 0.12 0.73 0.13 0.53 0.5 0.65 0.68 0.00 0.55


Other pairs involving 6CMN_A_D or 7DCO_4_G

Total number of entries: 8

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1URN_A_P 7DCO_4_G 0.23 0.6 1.36 0.17 RNA-binding domain, RBD compare
1A9N_B_Q 7DCO_4_G 0.43 0.58 1.31 0.17 RNA-binding domain, RBD compare
6CMN_A_D 6XH3_A_D 0.80 0.97 1.27 0.84 RNA-binding domain, RBD compare
6CMN_A_D 6XH2_A_D 0.99 0.99 0.17 0.95 RNA-binding domain, RBD compare
6CMN_A_D 7DCO_X_G 0.53 0.62 1.23 0.0 RNA-binding domain, RBD compare
6CMN_A_D 6DCL_A_D 0.48 0.61 1.72 0.16 RNA-binding domain, RBD compare
6CMN_A_D 7DCO_4_G 0.65 0.58 1.84 0.12 RNA-binding domain, RBD compare
6F4H_A_B 7DCO_4_G 0.35 0.61 1.28 0.17 RNA-binding domain, RBD compare