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All interfaces > All interologs > Interface groups > group141 > 6F4G_B_C vs 7DCO_R_G

Interface analysis


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Common contacts -

6F4G_B
6F4G_C
7DCO_R
7DCO_G
Conserved?
B:88 [SER] C:14 [A] R:230 [PRO] G:114 [U] ✔
B:88 [SER] C:15 [G] R:230 [PRO] G:115 [U] ✔
B:8 [THR] C:14 [A] R:136 [THR] G:114 [U] ✔
B:53 [PHE] C:13 [C] R:183 [PHE] G:113 [U] ✔
B:53 [PHE] C:14 [A] R:183 [PHE] G:114 [U] ✔
B:51 [GLN] C:12 [G] R:181 [CYS] G:112 [U] ✔
B:51 [GLN] C:13 [C] R:181 [CYS] G:113 [U] ✔
B:82 [ALA] C:13 [C] R:224 [LYS] G:113 [U] ✔
B:85 [LYS] C:13 [C] R:227 [ASN] G:113 [U] ✔
B:86 [SER] C:14 [A] R:228 [GLU] G:114 [U] ✔
B:84 [SER] C:13 [C] R:226 [ALA] G:113 [U] ✔
B:84 [SER] C:14 [A] R:226 [ALA] G:114 [U] ✔
B:41 [VAL] C:14 [A] R:174 [ARG] G:114 [U] ✔
B:41 [VAL] C:15 [G] R:174 [ARG] G:115 [U] ✔
B:13 [ASN] C:11 [U] R:141 [GLY] G:111 [U] ✔
B:13 [ASN] C:12 [G] R:141 [GLY] G:112 [U] ✔
B:83 [TYR] C:13 [C] R:225 [TRP] G:113 [U] ✔
B:12 [ASN] C:12 [G] R:140 [GLY] G:112 [U] ✔
B:48 [MET] C:12 [G] R:179 [LYS] G:112 [U] ✔
B:48 [MET] C:13 [C] R:179 [LYS] G:113 [U] ✔
B:49 [ARG] C:12 [G] R:180 [ASN] G:112 [U] ✔
B:10 [TYR] C:12 [G] R:138 [TYR] G:112 [U] ✔
B:10 [TYR] C:13 [C] R:138 [TYR] G:113 [U] ✔
B:87 [ASP] C:14 [A] R:229 [ASP] G:114 [U] ✔
B:43 [LEU] C:14 [A] R:176 [VAL] G:114 [U] ✔
B:43 [LEU] C:15 [G] R:176 [VAL] G:115 [U] ✔
B:80 [GLN] C:11 [U] R:222 [LEU] G:111 [U] ✔
B:86 [SER] C:13 [C] R:228 [GLU] G:113 [U] ❌ 7DCO_R_G
B:86 [SER] C:15 [G] R:228 [GLU] G:115 [U] ❌ 7DCO_R_G
B:12 [ASN] C:11 [U] R:140 [GLY] G:111 [U] ❌ 7DCO_R_G
B:48 [MET] C:14 [A] R:179 [LYS] G:114 [U] ❌ 7DCO_R_G
B:87 [ASP] C:15 [G] R:229 [ASP] G:115 [U] ❌ 7DCO_R_G
B:45 [THR] C:12 [G] R:178 [SER] G:112 [U] ❌ 6F4G_B_C
B:80 [GLN] C:12 [G] R:222 [LEU] G:112 [U] ❌ 6F4G_B_C
B:82 [ALA] C:12 [G] R:224 [LYS] G:112 [U] ❌ 6F4G_B_C
B:85 [LYS] C:14 [A] R:227 [ASN] G:114 [U] ❌ 6F4G_B_C
B:16 [GLU] C:10 [U] R:148 [SER] G:110 [U] ❌ 7DCO_R:148, 7DCO_G:110 no longer at interface
B:49 [ARG] C:10 [U] R:180 [ASN] G:110 [U] ❌ 7DCO_G:110 no longer at interface
B:14 [LEU] C:12 [G] R:142 [ILE] G:112 [U] ❌ 7DCO_R:142 no longer at interface
B:55 [ILE] C:14 [A] R:185 [LYS] G:114 [U] ❌ 7DCO_R:185 no longer at interface
B:90 [ILE] C:15 [G] R:235 [GLN] G:115 [U] ❌ 7DCO_R:235 no longer at interface
B:16 [GLU] C:12 [G] R:148 [SER] G:112 [U] ❌ 7DCO_R:148 no longer at interface
B:77 [LYS] C:11 [U] R:218 [GLY] G:111 [U] ❌ 7DCO_R:218 no longer at interface
B:89 [ASP] C:14 [A] R:234 [ALA] G:114 [U] ❌ 7DCO_R:234 no longer at interface
B:89 [ASP] C:15 [G] R:234 [ALA] G:115 [U] ❌ 7DCO_R:234 no longer at interface
B:1 [MET] C:13 [C] R:123 [ASP] G:113 [U] ❌ 6F4G_B:1 no longer at interface
B:2 [GLU] C:13 [C] R:124 [MET] G:113 [U] ❌ 6F4G_B:2 no longer at interface
B:15 [ASN] C:11 [U] R:143 [ASP] G:111 [U] ❌ 6F4G_B:15 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
0.68 2.57 0.14 0.8 0.14 0.66 0.83 0.76 0.66 0.21 0.57


Other pairs involving 6F4G_B_C or 7DCO_R_G

Total number of entries: 28

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1A9N_B_Q 6F4G_B_C 0.94 0.92 0.25 0.79 RNA-binding domain, RBD compare
1A9N_B_Q 7DCO_R_G 0.79 0.68 2.58 0.17 compare
1DRZ_A_B 7DCO_R_G 0.76 0.51 2.54 0.17 compare
1DRZ_A_B 6F4G_B_C 0.80 0.83 0.38 0.43 RNA-binding domain, RBD compare
1G2E_A_B 6F4G_B_C 0.57 0.61 3.03 0.15 RNA-binding domain, RBD compare
1M5O_C_B 6F4G_B_C 0.81 0.81 0.4 0.5 RNA-binding domain, RBD compare
1SJ3_P_R 7DCO_R_G 0.76 0.5 2.55 0.17 compare
1SJ3_P_R 6F4G_B_C 0.83 0.83 0.4 0.55 RNA-binding domain, RBD compare
1URN_A_P 7DCO_R_G 0.75 0.7 2.57 0.21 compare
1URN_A_P 6F4G_B_C 0.78 0.85 0.36 0.58 RNA-binding domain, RBD compare
2NZ4_A_P 6F4G_B_C 0.85 0.8 0.45 0.43 RNA-binding domain, RBD compare
3MXH_P_R 6F4G_B_C 0.80 0.77 0.94 0.46 RNA-binding domain, RBD compare
4ED5_A_D 6F4G_B_C 0.57 0.62 2.44 0.1 RNA-binding domain, RBD compare
4N0T_A_B 6F4G_B_C 0.58 0.61 3.62 0.0 RNA-binding domain, RBD compare
4PKD_B_V 6F4G_B_C 0.81 0.81 0.46 0.5 RNA-binding domain, RBD compare
4PR6_A_B 6F4G_B_C 0.80 0.83 0.4 0.46 RNA-binding domain, RBD compare
4PR6_A_B 7DCO_R_G 0.75 0.51 2.49 0.17 compare
5DDP_D_A 7DCO_R_G 0.74 0.54 2.57 0.21 compare
5DDP_D_A 6F4G_B_C 0.82 0.81 0.36 0.46 RNA-binding domain, RBD compare
5TF6_A_B 6F4G_B_C 0.58 0.61 3.75 0.0 RNA-binding domain, RBD compare
6DCL_A_D 6F4G_B_C 0.32 0.61 2.78 0.26 RNA-binding domain, RBD compare
6F4G_B_C 6F4H_A_B 0.81 0.87 0.36 0.5 RNA-binding domain, RBD compare
6F4G_B_C 7DCO_p_H 0.23 0.65 0.62 0.14 RNA-binding domain, RBD compare
6F4G_B_C 6SQN_A_X 0.91 0.87 0.39 0.6 RNA-binding domain, RBD compare
6F4G_B_C 7DCO_X_G 0.33 0.62 3.54 0.12 RNA-binding domain, RBD compare
6F4G_B_C 7DCO_R_G 0.76 0.68 2.57 0.14 compare
6F4H_A_B 7DCO_R_G 0.77 0.7 2.58 0.17 compare
6SQN_A_X 7DCO_R_G 0.73 0.72 2.65 0.17 compare