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All interfaces > All interologs > Interface groups > group141 > 6F4G_B_C vs 7DCO_p_H

Interface analysis


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Common contacts -

6F4G_B
6F4G_C
7DCO_p
7DCO_H
Conserved?
B:44 [LYS] C:19 [C] p:64 [ASN] H:1138 [G] ✔
B:46 [LEU] C:12 [G] p:66 [LYS] H:1106 [G] ✔
B:48 [MET] C:12 [G] p:68 [GLN] H:1106 [G] ✔
B:47 [LYS] C:12 [G] p:67 [LYS] H:1106 [G] ✔
B:20 [LYS] C:19 [C] p:41 [MET] H:1138 [G] ✔
B:49 [ARG] C:12 [G] p:69 [ARG] H:1106 [G] ✔
B:17 [LYS] C:9 [A] p:38 [LYS] H:1104 [U] ❌ 7DCO_p_H
B:49 [ARG] C:19 [C] p:69 [ARG] H:1138 [G] ❌ 7DCO_p_H
B:17 [LYS] C:19 [C] p:38 [LYS] H:1138 [G] ❌ 6F4G_B_C
B:49 [ARG] C:9 [A] p:69 [ARG] H:1104 [U] ❌ 6F4G_B_C
B:41 [VAL] C:15 [G] p:61 [VAL] H:1116 [A] ❌ 7DCO_p:61, 7DCO_H:1116 no longer at interface
B:46 [LEU] C:10 [U] p:66 [LYS] H:1105 [C] ❌ 7DCO_H:1105 no longer at interface
B:16 [GLU] C:10 [U] p:37 [GLU] H:1105 [C] ❌ 7DCO_p:37, 7DCO_H:1105 no longer at interface
B:49 [ARG] C:10 [U] p:69 [ARG] H:1105 [C] ❌ 7DCO_H:1105 no longer at interface
B:43 [LEU] C:15 [G] p:63 [MET] H:1116 [A] ❌ 7DCO_p:63, 7DCO_H:1116 no longer at interface
B:17 [LYS] C:5 [C] p:38 [LYS] H:1100 [A] ❌ 6F4G_C:5 no longer at interface
B:19 [LYS] C:3 [G] p:40 [ASN] H:1098 [C] ❌ 6F4G_B:19, 6F4G_C:3 no longer at interface
B:19 [LYS] C:2 [C] p:40 [ASN] H:1097 [G] ❌ 6F4G_B:19, 6F4G_C:2 no longer at interface
B:51 [GLN] C:12 [G] p:71 [GLN] H:1106 [G] ❌ 7DCO_p:71 no longer at interface
B:14 [LEU] C:12 [G] p:35 [LEU] H:1106 [G] ❌ 7DCO_p:35 no longer at interface
B:13 [ASN] C:12 [G] p:34 [GLN] H:1106 [G] ❌ 7DCO_p:34 no longer at interface
B:12 [ASN] C:12 [G] p:33 [SER] H:1106 [G] ❌ 7DCO_p:33 no longer at interface
B:50 [GLY] C:12 [G] p:70 [GLY] H:1106 [G] ❌ 7DCO_p:70 no longer at interface
B:16 [GLU] C:9 [A] p:37 [GLU] H:1104 [U] ❌ 7DCO_p:37 no longer at interface
B:16 [GLU] C:12 [G] p:37 [GLU] H:1106 [G] ❌ 7DCO_p:37 no longer at interface
B:45 [THR] C:19 [C] p:65 [PHE] H:1138 [G] ❌ 7DCO_p:65 no longer at interface
B:10 [TYR] C:12 [G] p:31 [TYR] H:1106 [G] ❌ 7DCO_p:31 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
RNA-binding domain, RBD 0.65 0.62 0.14 0.97 0.22 0.88 0.43 0.23 0.09 0.00 0.81


Other pairs involving 6F4G_B_C or 7DCO_p_H

Total number of entries: 21

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1A9N_B_Q 6F4G_B_C 0.94 0.92 0.25 0.79 RNA-binding domain, RBD compare
1A9N_B_Q 7DCO_p_H 0.32 0.68 0.46 0.29 RNA-binding domain, RBD compare
1DRZ_A_B 6F4G_B_C 0.80 0.83 0.38 0.43 RNA-binding domain, RBD compare
1G2E_A_B 6F4G_B_C 0.57 0.61 3.03 0.15 RNA-binding domain, RBD compare
1M5O_C_B 6F4G_B_C 0.81 0.81 0.4 0.5 RNA-binding domain, RBD compare
1SJ3_P_R 6F4G_B_C 0.83 0.83 0.4 0.55 RNA-binding domain, RBD compare
1URN_A_P 6F4G_B_C 0.78 0.85 0.36 0.58 RNA-binding domain, RBD compare
2NZ4_A_P 6F4G_B_C 0.85 0.8 0.45 0.43 RNA-binding domain, RBD compare
3MXH_P_R 6F4G_B_C 0.80 0.77 0.94 0.46 RNA-binding domain, RBD compare
4ED5_A_D 6F4G_B_C 0.57 0.62 2.44 0.1 RNA-binding domain, RBD compare
4N0T_A_B 6F4G_B_C 0.58 0.61 3.62 0.0 RNA-binding domain, RBD compare
4PKD_B_V 6F4G_B_C 0.81 0.81 0.46 0.5 RNA-binding domain, RBD compare
4PR6_A_B 6F4G_B_C 0.80 0.83 0.4 0.46 RNA-binding domain, RBD compare
5DDP_D_A 6F4G_B_C 0.82 0.81 0.36 0.46 RNA-binding domain, RBD compare
5TF6_A_B 6F4G_B_C 0.58 0.61 3.75 0.0 RNA-binding domain, RBD compare
6DCL_A_D 6F4G_B_C 0.32 0.61 2.78 0.26 RNA-binding domain, RBD compare
6F4G_B_C 6F4H_A_B 0.81 0.87 0.36 0.5 RNA-binding domain, RBD compare
6F4G_B_C 7DCO_p_H 0.23 0.65 0.62 0.14 RNA-binding domain, RBD compare
6F4G_B_C 6SQN_A_X 0.91 0.87 0.39 0.6 RNA-binding domain, RBD compare
6F4G_B_C 7DCO_X_G 0.33 0.62 3.54 0.12 RNA-binding domain, RBD compare
6F4G_B_C 7DCO_R_G 0.76 0.68 2.57 0.14 compare