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All interfaces > All interologs > Interface groups > group141 > 6F4H_A_B vs 7DCO_4_G

Interface analysis


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Common contacts -

6F4H_A
6F4H_B
7DCO_4
7DCO_G
Conserved?
A:8 [THR] B:12 [A] 4:10 [THR] G:483 [A] ✔
A:53 [PHE] B:12 [A] 4:54 [PHE] G:483 [A] ✔
A:51 [GLN] B:10 [G] 4:52 [TYR] G:481 [A] ✔
A:51 [GLN] B:11 [C] 4:52 [TYR] G:482 [A] ✔
A:55 [ILE] B:12 [A] 4:56 [GLU] G:483 [A] ✔
A:41 [VAL] B:12 [A] 4:39 [LYS] G:483 [A] ✔
A:49 [ARG] B:10 [G] 4:50 [GLN] G:481 [A] ✔
A:10 [TYR] B:10 [G] 4:12 [TYR] G:481 [A] ✔
A:43 [LEU] B:12 [A] 4:41 [PRO] G:483 [A] ✔
A:43 [LEU] B:15 [U] 4:41 [PRO] G:484 [A] ✔
A:53 [PHE] B:11 [C] 4:54 [PHE] G:482 [A] ❌ 7DCO_4_G
A:82 [ALA] B:11 [C] 4:84 [ARG] G:482 [A] ❌ 7DCO_4_G
A:84 [SER] B:11 [C] 4:86 [VAL] G:482 [A] ❌ 7DCO_4_G
A:84 [SER] B:12 [A] 4:86 [VAL] G:483 [A] ❌ 7DCO_4_G
A:83 [TYR] B:11 [C] 4:85 [GLN] G:482 [A] ❌ 7DCO_4_G
A:10 [TYR] B:11 [C] 4:12 [TYR] G:482 [A] ❌ 7DCO_4_G
A:41 [VAL] B:15 [U] 4:39 [LYS] G:484 [A] ❌ 6F4H_A_B
A:43 [LEU] B:11 [C] 4:41 [PRO] G:482 [A] ❌ 6F4H_A_B
A:44 [LYS] B:15 [U] 4:42 [LYS] G:484 [A] ❌ 6F4H_A_B
A:45 [THR] B:15 [U] 4:43 [ASP] G:484 [A] ❌ 6F4H_A_B
A:45 [THR] B:11 [C] 4:43 [ASP] G:482 [A] ❌ 6F4H_A_B
A:49 [ARG] B:11 [C] 4:50 [GLN] G:482 [A] ❌ 6F4H_A_B
A:51 [GLN] B:12 [A] 4:52 [TYR] G:483 [A] ❌ 6F4H_A_B
A:53 [PHE] B:10 [G] 4:54 [PHE] G:481 [A] ❌ 6F4H_A_B
A:82 [ALA] B:9 [U] 4:84 [ARG] G:480 [A] ❌ 6F4H_A_B
A:82 [ALA] B:10 [G] 4:84 [ARG] G:481 [A] ❌ 6F4H_A_B
A:83 [TYR] B:10 [G] 4:85 [GLN] G:481 [A] ❌ 6F4H_A_B
A:84 [SER] B:10 [G] 4:86 [VAL] G:481 [A] ❌ 6F4H_A_B
A:14 [LEU] B:10 [G] 4:16 [ILE] G:481 [A] ❌ 7DCO_4:16 no longer at interface
A:13 [ASN] B:9 [U] 4:15 [ASN] G:480 [A] ❌ 7DCO_4:15 no longer at interface
A:13 [ASN] B:10 [G] 4:15 [ASN] G:481 [A] ❌ 7DCO_4:15 no longer at interface
A:12 [ASN] B:9 [U] 4:14 [GLY] G:480 [A] ❌ 7DCO_4:14 no longer at interface
A:12 [ASN] B:10 [G] 4:14 [GLY] G:481 [A] ❌ 7DCO_4:14 no longer at interface
A:46 [LEU] B:10 [G] 4:46 [LEU] G:481 [A] ❌ 7DCO_4:46 no longer at interface
A:48 [MET] B:10 [G] 4:49 [TYR] G:481 [A] ❌ 7DCO_4:49 no longer at interface
A:48 [MET] B:11 [C] 4:49 [TYR] G:482 [A] ❌ 7DCO_4:49 no longer at interface
A:48 [MET] B:12 [A] 4:49 [TYR] G:483 [A] ❌ 7DCO_4:49 no longer at interface
A:50 [GLY] B:10 [G] 4:51 [GLY] G:481 [A] ❌ 7DCO_4:51 no longer at interface
A:16 [GLU] B:10 [G] 4:18 [PRO] G:481 [A] ❌ 7DCO_4:18 no longer at interface
A:77 [LYS] B:9 [U] 4:79 [ARG] G:480 [A] ❌ 7DCO_4:79 no longer at interface
A:80 [GLN] B:9 [U] 4:82 [LYS] G:480 [A] ❌ 7DCO_4:82 no longer at interface
A:24 [LYS] B:15 [U] 4:22 [LYS] G:484 [A] ❌ 6F4H_A:24 no longer at interface
A:39 [ASP] B:12 [A] 4:37 [ARG] G:483 [A] ❌ 6F4H_A:39 no longer at interface
A:42 [ALA] B:15 [U] 4:40 [TYR] G:484 [A] ❌ 6F4H_A:42 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
RNA-binding domain, RBD 0.61 1.28 0.17 0.72 0.16 0.76 0.83 0.35 0.37 0.00 0.47


Other pairs involving 6F4H_A_B or 7DCO_4_G

Total number of entries: 23

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
1A9N_B_Q 7DCO_4_G 0.43 0.58 1.31 0.17 RNA-binding domain, RBD compare
1A9N_B_Q 6F4H_A_B 0.81 0.85 0.49 0.5 RNA-binding domain, RBD compare
1DRZ_A_B 6F4H_A_B 0.94 0.95 0.38 0.68 RNA-binding domain, RBD compare
1G2E_A_B 6F4H_A_B 0.57 0.64 3.02 0.1 RNA-binding domain, RBD compare
1M5O_C_B 6F4H_A_B 0.95 0.95 0.48 0.7 RNA-binding domain, RBD compare
1SJ3_P_R 6F4H_A_B 0.97 0.96 0.38 0.71 RNA-binding domain, RBD compare
1URN_A_P 7DCO_4_G 0.23 0.6 1.36 0.17 RNA-binding domain, RBD compare
1URN_A_P 6F4H_A_B 0.95 0.94 0.32 0.72 RNA-binding domain, RBD compare
2NZ4_A_P 6F4H_A_B 0.92 0.95 0.41 0.7 RNA-binding domain, RBD compare
3MXH_P_R 6F4H_A_B 0.95 0.91 0.91 0.59 RNA-binding domain, RBD compare
4ED5_A_D 6F4H_A_B 0.56 0.65 2.49 0.1 RNA-binding domain, RBD compare
4N0T_A_B 6F4H_A_B 0.56 0.64 3.75 0.0 RNA-binding domain, RBD compare
4PKD_B_V 6F4H_A_B 0.88 0.94 0.45 0.65 RNA-binding domain, RBD compare
4PR6_A_B 6F4H_A_B 0.94 0.95 0.38 0.68 RNA-binding domain, RBD compare
5DDP_D_A 6F4H_A_B 0.92 0.96 0.33 0.68 RNA-binding domain, RBD compare
5TF6_A_B 6F4H_A_B 0.57 0.64 3.83 0.0 RNA-binding domain, RBD compare
6CMN_A_D 7DCO_4_G 0.65 0.58 1.84 0.12 RNA-binding domain, RBD compare
6DCL_A_D 6F4H_A_B 0.33 0.63 1.94 0.17 RNA-binding domain, RBD compare
6F4G_B_C 6F4H_A_B 0.81 0.87 0.36 0.5 RNA-binding domain, RBD compare
6F4H_A_B 7DCO_4_G 0.35 0.61 1.28 0.17 RNA-binding domain, RBD compare
6F4H_A_B 6SQN_A_X 0.93 0.92 0.38 0.74 RNA-binding domain, RBD compare
6F4H_A_B 7DCO_R_G 0.77 0.7 2.58 0.17 compare
6F4H_A_B 7DCO_X_G 0.43 0.65 2.51 0.12 RNA-binding domain, RBD compare