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All interfaces > All interologs > Interface groups > group141 > 6SQN_A_X vs 7DCO_X_G

Interface analysis


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Common contacts -

6SQN_A
6SQN_X
7DCO_X
7DCO_G
Conserved?
A:19 [GLU] X:8 [U] X:40 [ARG] G:519 [U] ✔
A:13 [TYR] X:9 [G] X:34 [TYR] G:520 [G] ✔
A:91 [SER] X:11 [A] X:110 [ARG] G:521 [U] ✔
A:90 [ASP] X:11 [A] X:109 [TYR] G:521 [U] ✔
A:87 [ALA] X:11 [A] X:107 [THR] G:521 [U] ✔
A:54 [GLN] X:9 [G] X:74 [PHE] G:520 [G] ✔
A:89 [THR] X:11 [A] X:108 [PHE] G:521 [U] ✔
A:56 [TRP] X:11 [A] X:76 [TYR] G:521 [U] ✔
A:19 [GLU] X:9 [G] X:40 [ARG] G:520 [G] ❌ 7DCO_X_G
A:80 [LYS] X:8 [U] X:100 [ARG] G:519 [U] ❌ 7DCO_X_G
A:16 [ASN] X:8 [U] X:37 [ASN] G:519 [U] ❌ 7DCO_X_G
A:16 [ASN] X:9 [G] X:37 [ASN] G:520 [G] ❌ 7DCO_X_G
A:52 [ARG] X:9 [G] X:72 [GLN] G:520 [G] ❌ 7DCO_X_G
A:85 [GLN] X:9 [G] X:105 [ASP] G:520 [G] ❌ 6SQN_A_X
A:86 [TYR] X:9 [G] X:106 [HIS] G:520 [G] ❌ 6SQN_A_X
A:87 [ALA] X:9 [G] X:107 [THR] G:520 [G] ❌ 6SQN_A_X
A:89 [THR] X:9 [G] X:108 [PHE] G:520 [G] ❌ 6SQN_A_X
A:52 [ARG] X:8 [U] X:72 [GLN] G:519 [U] ❌ 6SQN_A_X
A:54 [GLN] X:11 [A] X:74 [PHE] G:521 [U] ❌ 6SQN_A_X
A:54 [GLN] X:8 [U] X:74 [PHE] G:519 [U] ❌ 6SQN_A_X
A:56 [TRP] X:9 [G] X:76 [TYR] G:520 [G] ❌ 6SQN_A_X
A:19 [GLU] X:7 [U] X:40 [ARG] G:518 [U] ❌ 7DCO_G:518 no longer at interface
A:49 [LEU] X:7 [U] X:66 [GLU] G:518 [U] ❌ 7DCO_X:66, 7DCO_G:518 no longer at interface
A:52 [ARG] X:7 [U] X:72 [GLN] G:518 [U] ❌ 7DCO_G:518 no longer at interface
A:15 [ASN] X:8 [U] X:36 [GLY] G:519 [U] ❌ 7DCO_X:36 no longer at interface
A:15 [ASN] X:9 [G] X:36 [GLY] G:520 [G] ❌ 7DCO_X:36 no longer at interface
A:17 [LEU] X:9 [G] X:38 [LEU] G:520 [G] ❌ 7DCO_X:38 no longer at interface
A:11 [THR] X:11 [A] X:32 [TYR] G:521 [U] ❌ 7DCO_X:32 no longer at interface
A:49 [LEU] X:9 [G] X:66 [GLU] G:520 [G] ❌ 7DCO_X:66 no longer at interface
A:53 [GLY] X:9 [G] X:73 [GLY] G:520 [G] ❌ 7DCO_X:73 no longer at interface
A:51 [MET] X:9 [G] X:71 [SER] G:520 [G] ❌ 7DCO_X:71 no longer at interface
A:51 [MET] X:11 [A] X:71 [SER] G:521 [U] ❌ 7DCO_X:71 no longer at interface
A:44 [LEU] X:11 [A] X:61 [ILE] G:521 [U] ❌ 7DCO_X:61 no longer at interface

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Properties of this pair

Common ECOD label(s)
 Common RFAM label(s)
 Interface TM-score
 Interface RMSD
 Percentage identity
 Protein TM-score
 RNA TM-score
 Protein coverage
 RNA coverage
 Percentage conservation
 Apolar conservation
 H-bond conservation
 Percentage switching out
RNA-binding domain, RBD 0.66 2.52 0.12 0.73 0.26 0.88 0.5 0.45 0.57 0.17 0.48


Other pairs involving 6SQN_A_X or 7DCO_X_G

Total number of entries: 23

Interface 1 Interface 2 Percentage conservation
 		Interface TM-score
 		Interface RMSD
 		Percentage identity
 		Common ECOD label(s)
 		Common RFAM label(s)
 		Explore both interfaces
6XH2_A_D 7DCO_X_G 0.57 0.61 1.84 0.0 RNA-binding domain, RBD compare
1DRZ_A_B 6SQN_A_X 0.95 0.96 0.29 0.89 RNA-binding domain, RBD compare
6F4G_B_C 6SQN_A_X 0.91 0.87 0.39 0.6 RNA-binding domain, RBD compare
6F4G_B_C 7DCO_X_G 0.33 0.62 3.54 0.12 RNA-binding domain, RBD compare
4ED5_A_D 6SQN_A_X 0.55 0.65 2.53 0.1 RNA-binding domain, RBD compare
1G2E_A_B 6SQN_A_X 0.55 0.64 3.14 0.1 RNA-binding domain, RBD compare
1URN_A_P 7DCO_X_G 0.42 0.64 2.53 0.12 RNA-binding domain, RBD compare
4PR6_A_B 6SQN_A_X 0.95 0.96 0.3 0.89 RNA-binding domain, RBD compare
6XH3_A_D 7DCO_X_G 0.50 0.63 1.21 0.0 RNA-binding domain, RBD compare
3MXH_P_R 6SQN_A_X 0.91 0.88 0.96 0.7 RNA-binding domain, RBD compare
1A9N_B_Q 6SQN_A_X 0.92 0.87 0.86 0.6 RNA-binding domain, RBD compare
1A9N_B_Q 7DCO_X_G 0.31 0.63 3.58 0.12 RNA-binding domain, RBD compare
6SQN_A_X 7DCO_R_G 0.73 0.72 2.65 0.17 compare
6SQN_A_X 7DCO_X_G 0.45 0.66 2.52 0.12 RNA-binding domain, RBD compare
6CMN_A_D 7DCO_X_G 0.53 0.62 1.23 0.0 RNA-binding domain, RBD compare
5TF6_A_B 6SQN_A_X 0.56 0.63 2.54 0.1 RNA-binding domain, RBD compare
1M5O_C_B 6SQN_A_X 0.99 0.95 0.55 0.93 RNA-binding domain, RBD compare
6DCL_A_D 6SQN_A_X 0.28 0.63 1.96 0.13 RNA-binding domain, RBD compare
4N0T_A_B 6SQN_A_X 0.59 0.65 3.87 0.0 RNA-binding domain, RBD compare
4PKD_B_V 6SQN_A_X 0.96 0.94 0.34 0.8 RNA-binding domain, RBD compare
2NZ4_A_P 6SQN_A_X 0.96 0.93 0.39 0.8 RNA-binding domain, RBD compare
6F4H_A_B 6SQN_A_X 0.93 0.92 0.38 0.74 RNA-binding domain, RBD compare
6F4H_A_B 7DCO_X_G 0.43 0.65 2.51 0.12 RNA-binding domain, RBD compare